Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SAMD10 Gene 0 38.24 43.44 58.88 46.83 18.19 57.25 15.52 51.89 35.47 52.23 93.39 15.70 36.75 81.62 72.22 49.92 77.27 73.76 34.11 37.28 11.73 4.37 6.23 2 498830 Transcript 0 6.00 2.36 1.76 1.58 0.00 2.27 0.71 0.80 1.89 2.34 5.65 0.00 0.00 5.07 11.10 8.32 2.29 4.45 6.82 2.17 1.45 0.00 0.00 3 478694 Transcript 0 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 2.47 0.00 0.00 3.74 0.00 0.00 0.00 0.00 0.00 0.00 4 450107 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 369885 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 369886 Transcript 0 0.00 2.50 2.25 14.08 0.00 9.31 1.81 11.46 11.23 11.93 21.01 0.00 6.82 10.36 19.53 3.50 12.44 8.58 4.80 9.78 6.30 0.00 0.00 7 ER1a ExonRegion 1 8.21 4.72 1.86 0.00 0.00 4.55 1.43 1.59 1.24 3.58 4.25 0.00 0.00 7.73 16.01 16.64 0.66 6.58 13.63 4.34 0.00 0.00 0.00 8 ER1b ExonRegion 1 9.59 11.86 7.78 3.64 1.05 11.44 4.41 4.75 6.94 11.63 42.61 0.00 4.55 12.42 11.27 28.21 47.15 34.94 23.62 14.12 1.78 1.63 1.15 9 E1_Da NovelBoundary 0 0.00 0.00 2.90 2.06 0.00 0.00 0.00 0.00 9.52 8.92 25.06 0.00 14.61 2.47 4.82 3.25 35.34 21.10 12.14 0.00 3.09 0.00 0.00 10 E1a_E3a KnownJunction 0 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 2.47 0.00 0.00 3.74 0.00 0.00 0.00 0.00 0.00 0.00 11 E1a_E4a KnownJunction 0 3.78 0.00 1.66 3.16 0.00 0.00 0.00 0.00 2.55 1.10 7.05 0.00 0.00 2.41 6.18 0.00 3.93 2.32 0.00 0.00 2.90 0.00 0.00 12 ER2a ExonRegion 0 1.22 1.15 2.87 1.38 0.69 17.19 0.81 3.43 3.26 3.85 7.70 0.00 3.31 10.26 9.53 5.30 5.73 9.32 3.42 3.34 2.48 0.40 1.69 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 4.73 4.16 0.00 0.00 0.00 1.79 3.06 2.32 0.00 0.00 2.12 5.19 0.00 4.11 2.53 0.00 0.00 0.00 0.00 0.00 14 E2a_E4a KnownJunction 0 0.00 2.50 2.25 14.08 0.00 9.31 1.81 11.46 11.23 11.93 21.01 0.00 6.82 10.36 19.53 3.50 12.44 8.58 4.80 9.78 6.30 0.00 0.00 15 Ix Intron 1 5.47 6.04 10.15 6.03 4.42 6.86 2.62 9.49 9.92 12.69 21.16 2.00 1.70 21.77 15.60 10.46 17.80 21.12 10.34 10.53 2.42 0.69 0.48 16 Ix_AR2 ActiveIntronRegion 0 10.41 2.54 23.18 18.40 16.05 24.15 2.65 24.34 24.39 18.83 31.25 0.00 4.69 41.14 21.52 25.76 19.81 39.42 40.61 12.23 3.12 2.26 0.00 17 Ix_AR1 ActiveIntronRegion 0 8.23 5.89 16.79 10.23 3.45 8.84 4.78 15.14 15.81 18.42 35.08 2.62 1.58 26.77 23.57 16.25 29.88 35.83 20.40 17.86 3.77 1.01 1.44 18 E3_Aa NovelBoundary 0 14.52 32.49 17.98 12.22 8.06 13.63 8.17 33.39 25.14 19.15 45.96 6.30 6.82 35.91 9.77 19.65 37.03 39.01 12.61 14.25 2.72 0.00 0.00 19 ER3a ExonRegion 1 14.92 6.94 20.61 21.85 11.23 20.52 10.57 21.29 21.24 25.41 63.01 4.44 7.74 42.13 35.68 39.22 58.74 47.09 28.80 18.51 1.54 3.01 0.00 20 E3_Da NovelBoundary 1 13.19 3.16 10.44 3.36 0.00 5.11 2.03 14.95 8.59 10.37 19.32 0.00 0.00 24.07 24.11 7.26 42.36 21.64 21.46 17.96 0.00 0.00 0.00 21 E3a_E4a KnownJunction 0 26.75 9.80 31.13 17.15 8.66 15.73 6.45 33.97 26.65 34.95 72.76 5.40 6.82 57.63 24.11 25.04 64.70 48.29 12.99 25.50 5.13 2.88 0.00 22 Ix Intron 1 6.96 6.31 11.11 8.90 2.44 4.69 3.71 10.82 11.43 13.63 25.29 2.63 7.45 14.26 15.82 11.03 19.89 30.18 14.54 15.67 2.15 1.39 2.32 23 Ix_SR1 SilentIntronRegion 0 4.41 1.80 10.92 6.50 2.37 3.72 3.59 6.12 8.01 9.40 20.27 1.11 3.22 13.09 10.78 4.42 7.07 21.28 23.03 11.79 2.20 0.00 1.34 24 Ix_AR1 ActiveIntronRegion 0 8.26 7.40 12.28 10.14 2.44 4.56 4.14 12.13 12.15 15.39 28.45 2.84 9.65 15.13 16.85 12.45 23.23 33.97 14.81 17.89 2.49 1.84 2.75 25 E4_Aa NovelBoundary 0 3.19 9.27 9.70 20.98 0.00 7.55 5.48 24.03 15.13 23.07 43.75 0.00 0.00 9.65 4.45 3.25 21.32 20.40 17.88 23.20 5.31 2.63 0.00 26 ER4a ExonRegion 0 20.32 20.91 40.88 37.48 6.64 31.14 16.44 47.64 41.63 59.08 108.07 14.76 26.05 88.12 74.19 50.45 105.87 92.89 39.27 38.51 19.29 11.59 3.18 27 E4_Da KnownBoundary 0 16.08 20.39 48.90 63.03 16.47 46.11 17.44 47.93 44.27 58.72 73.07 11.85 33.44 89.00 100.87 47.59 72.09 134.72 44.05 33.56 14.83 8.94 6.83 28 ER4b ExonRegion 0 44.18 32.51 57.63 46.53 16.95 51.88 13.33 60.86 38.61 68.53 112.91 14.85 33.42 100.22 102.11 35.38 72.12 106.09 59.02 42.08 20.41 8.71 6.97 29 E4_Db NovelBoundary 0 31.41 0.00 11.74 8.02 4.16 15.50 9.54 19.22 14.15 12.73 21.69 0.00 27.27 9.54 31.89 6.92 18.51 21.39 4.33 19.18 0.00 0.00 0.00 30 E4b_E5a KnownJunction 0 12.82 17.83 64.37 25.27 19.69 50.54 14.18 58.45 33.36 48.46 71.86 18.01 6.01 66.46 58.84 13.84 50.40 46.64 29.55 49.79 19.77 7.72 7.85 31 ER5a ExonRegion 0 25.95 24.37 66.08 37.03 12.49 52.28 11.37 56.99 36.50 61.01 96.05 10.77 32.88 90.88 88.08 41.21 90.51 71.35 35.21 46.34 17.67 4.81 9.00 32 E5a_E6a KnownJunction 1 29.63 16.05 51.59 28.60 0.00 35.04 9.76 62.15 34.92 58.08 97.97 6.00 46.10 106.78 82.58 31.27 110.05 65.58 8.19 58.55 17.24 0.00 8.11 33 ER6a ExonRegion 0 18.97 22.66 48.39 29.16 4.90 30.56 11.20 45.93 29.25 49.64 81.04 12.65 16.56 72.44 84.40 28.67 88.35 45.76 21.82 36.46 13.30 2.26 2.10 34 E6a_E7a KnownJunction 1 32.01 59.33 82.52 64.19 10.27 83.47 24.69 96.32 50.55 60.57 106.40 13.80 6.49 115.08 98.77 31.53 95.93 91.94 60.99 40.91 11.31 0.00 3.76 35 ER7a ExonRegion 1 46.38 41.69 68.58 48.10 17.53 85.33 20.59 67.98 37.69 52.62 127.77 10.45 13.26 100.00 85.64 29.47 106.60 90.00 25.54 37.38 15.81 0.97 2.53 36 E7_Da KnownBoundary 1 52.68 55.85 51.36 47.85 26.66 98.30 20.01 44.52 40.48 57.75 128.03 0.00 21.26 79.17 66.51 33.75 86.77 78.06 15.62 30.10 16.43 3.12 7.77 37 ER7b ExonRegion 1 24.75 25.53 64.87 45.90 19.59 64.31 11.06 51.40 41.75 62.76 91.62 3.35 18.80 95.58 72.96 58.72 86.54 76.58 13.10 26.23 11.19 3.55 3.73 38 E7_Db KnownBoundary 0 58.01 56.31 55.76 69.59 11.21 57.35 15.02 71.51 49.83 74.22 109.13 7.65 39.45 111.54 104.58 94.59 99.77 100.77 40.85 40.40 12.85 8.51 3.33 39 ER7c ExonRegion 0 57.88 69.28 81.74 68.52 28.01 79.43 21.84 70.15 46.49 66.83 118.77 24.59 57.40 105.21 90.35 67.92 91.42 94.33 44.33 48.82 13.63 5.25 9.14