Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP4-697K14.2 Gene 0 19.10 3.77 24.54 6.68 18.57 53.32 6.25 78.61 50.49 32.33 78.24 14.69 21.20 200.60 152.72 151.28 103.26 16.71 10.70 12.74 40.99 24.78 30.88 2 370082 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 479540 Transcript 0 6.28 1.22 3.44 1.21 4.95 4.10 3.59 8.96 4.04 4.42 7.01 2.63 2.68 26.29 22.02 24.00 17.56 2.89 1.50 2.11 3.88 1.60 6.42 4 252889 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 467148 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 427522 Transcript 0 5.66 0.96 8.22 2.89 3.80 8.93 1.71 23.80 14.21 10.32 9.10 1.69 3.05 26.28 22.21 24.60 16.98 3.48 4.02 2.33 5.35 5.39 7.16 7 370091 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 478861 Transcript 0 5.63 0.00 43.79 7.79 19.69 45.71 1.72 80.75 48.29 19.77 40.75 16.81 30.68 89.29 45.49 3.50 0.00 11.28 3.67 12.27 28.48 18.68 19.72 9 ER1a ExonRegion 1 7.33 2.29 1.99 0.00 0.62 17.03 5.25 5.03 3.84 2.48 30.62 0.00 0.00 33.70 86.73 36.94 49.16 1.62 2.90 0.00 19.60 4.84 7.66 10 E1a_E2a KnownJunction 0 35.71 5.79 6.74 0.00 3.74 66.78 8.48 33.64 19.50 9.94 89.34 10.95 12.01 136.03 208.91 166.37 133.61 13.18 17.32 3.00 44.54 9.37 32.44 11 ER2a ExonRegion 0 5.64 1.73 9.39 2.11 7.05 25.04 3.67 29.05 27.06 13.38 60.29 4.67 10.58 153.91 117.65 93.89 75.75 10.19 8.16 9.20 31.93 14.80 21.80 12 E2_Ab KnownBoundary 0 16.60 0.00 11.65 1.96 3.23 46.51 0.00 37.17 33.45 21.46 77.49 7.50 13.64 199.90 99.14 92.63 64.42 2.16 4.80 14.57 37.50 18.92 7.94 13 ER2b ExonRegion 0 10.53 1.79 8.21 4.22 5.95 30.05 2.53 46.90 35.04 22.96 72.87 10.43 18.80 199.21 159.38 140.40 107.34 15.27 14.41 12.09 36.35 21.82 23.42 14 E2_Da KnownBoundary 0 24.97 0.00 8.13 6.73 0.00 18.91 2.25 9.04 6.37 3.68 4.11 0.00 7.63 26.96 17.80 33.15 16.36 9.82 0.00 3.26 8.90 6.00 12.21 15 E2a_E2c KnownJunction 0 3.11 0.00 3.10 1.76 21.56 28.34 2.25 64.98 36.31 15.10 74.44 6.30 40.09 238.74 258.36 157.65 126.69 12.85 8.75 11.70 14.64 32.03 43.79 16 ER2c ExonRegion 0 11.59 1.34 6.12 2.42 5.58 8.20 5.36 16.86 7.31 8.85 14.02 4.92 4.29 49.83 43.81 47.55 31.06 5.78 3.00 4.22 7.42 3.20 11.49 17 E2_Ac KnownBoundary 0 3.63 0.00 1.33 0.00 4.33 2.50 4.42 13.64 7.03 10.50 7.32 0.00 0.00 26.61 44.50 51.10 29.27 7.34 4.05 11.44 7.66 0.00 8.28 18 ER2d ExonRegion 0 6.19 0.57 5.90 0.81 10.21 24.57 3.83 52.00 36.37 31.44 77.97 11.50 17.50 205.90 188.19 126.96 110.34 17.36 14.64 17.95 38.00 19.67 16.72 19 E2b_E3a KnownJunction 1 26.45 0.00 8.66 1.53 23.01 50.82 3.53 67.85 43.14 56.84 144.77 17.11 6.82 315.03 223.62 262.67 126.60 35.32 21.27 23.65 39.60 65.03 24.50 20 E3_Aa NovelBoundary 0 11.04 0.00 3.67 0.00 17.06 25.33 0.00 0.00 8.25 1.64 2.63 0.00 0.00 7.12 11.50 39.05 0.00 5.14 0.00 0.00 6.30 3.12 8.11 21 ER3a ExonRegion 1 17.15 2.20 11.14 4.96 13.90 43.81 7.06 71.75 67.81 44.65 123.65 16.28 12.64 261.62 236.96 194.45 126.41 27.92 22.36 15.23 56.83 31.66 43.61 22 E3_Da KnownBoundary 0 3.33 3.35 4.26 7.36 4.33 16.81 2.25 13.60 11.20 8.97 6.90 5.55 0.00 37.26 58.72 27.51 20.66 0.00 0.00 3.26 6.05 10.84 16.13 23 E3a_E4a KnownJunction 0 10.52 0.00 5.71 3.13 3.90 39.24 2.25 74.63 56.19 35.59 78.23 26.11 13.31 155.57 197.42 106.64 115.75 24.79 30.59 6.01 51.40 13.29 24.76 24 ER3b ExonRegion 0 11.17 3.27 5.46 3.35 13.49 13.06 6.13 13.59 10.22 6.01 9.90 9.96 11.27 34.40 48.16 27.35 23.51 5.15 1.78 10.85 6.85 7.44 16.97 25 E3_Db NovelBoundary 0 15.19 20.46 11.53 1.80 36.67 5.17 17.49 11.30 2.72 3.87 7.58 18.61 0.00 9.48 16.07 14.70 15.80 3.73 21.18 5.31 2.66 5.51 19.63 26 E3_Dc NovelBoundary 1 184.70 220.55 108.39 114.04 239.98 84.84 197.19 109.30 98.84 88.75 53.65 140.75 219.14 115.78 94.57 162.27 126.79 105.87 139.11 105.27 56.03 25.23 152.46 27 ER3c ExonRegion 0 0.98 1.09 0.75 0.00 4.32 0.00 1.83 1.06 0.76 0.00 0.00 0.33 1.08 2.75 0.22 0.46 4.06 0.00 0.00 0.00 0.34 0.00 1.36 28 E4_Aa NovelBoundary 0 3.19 0.00 14.81 0.00 12.31 7.21 6.05 8.87 11.72 6.93 2.68 6.30 0.00 23.90 24.60 7.60 21.22 3.86 0.00 0.00 6.18 8.51 13.49 29 ER4a ExonRegion 0 8.25 1.21 18.51 4.37 7.57 43.06 4.64 69.37 54.53 35.10 80.59 13.70 16.01 233.69 179.48 137.06 108.56 21.20 11.18 13.40 40.12 22.96 33.66 30 E4a_E5a KnownJunction 0 7.11 0.00 18.30 1.70 11.46 51.50 3.36 85.56 55.01 48.73 89.13 36.01 40.58 219.26 199.64 132.87 126.23 21.39 8.66 17.13 53.44 33.37 33.72 31 ER5a ExonRegion 0 7.84 0.97 19.32 2.81 6.03 41.29 3.94 53.43 40.73 27.52 66.60 16.13 26.18 202.09 170.23 141.62 101.23 14.90 14.88 11.33 40.83 20.91 27.93 32 E5a_E6c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 E6_Aa NovelBoundary 0 13.34 0.00 8.99 1.90 3.82 8.23 8.74 35.16 22.51 12.95 2.53 0.00 0.00 41.62 18.91 18.63 17.39 3.90 0.00 2.94 0.00 8.82 8.02 34 ER6a ExonRegion 0 5.66 0.96 8.22 2.89 3.80 8.93 1.71 23.80 14.21 10.32 9.10 1.69 3.05 26.28 22.21 24.60 16.98 3.48 4.02 2.33 5.35 5.39 7.16 35 E6_Ab KnownBoundary 0 10.22 0.00 4.73 0.00 0.00 7.72 7.91 21.19 15.89 8.17 2.21 0.00 0.00 15.83 5.19 15.89 28.99 5.10 0.00 0.00 2.97 3.00 8.37 36 ER6b ExonRegion 0 8.80 0.83 5.96 2.61 3.45 10.75 3.70 35.36 14.15 9.79 6.91 4.23 4.01 26.61 29.96 26.01 19.30 4.60 5.05 2.67 2.10 5.82 7.09 37 E6_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER6c ExonRegion 0 8.05 1.55 18.50 4.78 9.43 38.68 5.40 64.40 47.75 30.43 76.07 23.13 43.88 245.99 164.92 156.45 106.20 20.34 10.44 10.42 42.40 25.11 31.97 39 E6a_E7a KnownJunction 0 7.19 3.09 31.31 3.56 7.47 20.61 4.33 71.80 72.25 38.41 95.39 18.76 19.32 299.55 204.96 208.66 133.05 19.86 12.99 17.77 55.23 25.17 51.99 40 ER7a ExonRegion 0 5.57 1.85 19.67 6.80 4.01 32.16 2.19 69.59 55.71 31.81 98.04 28.83 13.45 232.68 172.89 163.19 129.91 13.15 6.50 19.01 40.57 23.25 27.01 41 E7a_E8a KnownJunction 0 5.85 2.50 12.00 2.80 4.33 46.62 1.94 84.65 61.54 31.72 95.02 24.76 20.45 197.78 144.76 151.67 130.62 13.68 7.62 17.00 30.89 14.94 22.45 42 ER8a ExonRegion 0 9.73 2.57 25.00 5.43 12.42 53.85 4.80 78.42 54.02 34.36 89.52 14.47 24.39 241.98 159.46 170.29 117.59 17.59 10.44 13.23 49.25 26.38 34.39 43 E8_Da NovelBoundary 0 7.56 0.00 9.73 2.03 0.00 10.79 0.00 25.71 6.66 10.93 7.05 0.00 6.33 13.89 5.69 11.79 21.51 4.27 4.33 0.00 0.00 0.00 0.00 44 E8a_E9a KnownJunction 0 24.23 0.00 24.84 3.06 30.39 106.42 2.25 111.80 72.25 33.93 90.08 30.91 33.76 282.07 110.14 186.70 137.17 25.16 16.57 5.82 45.84 35.64 22.88 45 ER9a ExonRegion 0 26.16 6.94 46.59 12.04 24.56 89.33 8.53 134.18 67.26 46.29 111.17 21.05 29.18 267.19 207.67 240.30 165.46 24.18 17.64 5.22 58.13 36.56 33.82 46 E9a_E10a KnownJunction 0 61.20 9.67 60.64 12.12 45.93 110.67 14.00 177.23 78.36 58.59 118.61 6.30 50.00 342.52 190.87 236.43 237.03 26.49 37.84 14.96 54.98 44.15 42.34 47 ER10a ExonRegion 0 23.07 5.67 47.60 10.95 24.93 82.74 10.01 129.22 64.78 36.40 87.20 14.92 32.62 255.05 176.93 166.66 141.44 15.27 10.57 15.86 54.68 27.84 30.21 48 E10a_E11a KnownJunction 0 54.97 11.71 46.86 19.84 26.99 136.40 25.00 190.50 90.60 45.10 84.55 37.06 39.12 360.53 290.50 290.86 175.78 24.91 8.66 11.25 48.19 44.88 33.97 49 ER11a ExonRegion 0 38.89 11.25 42.93 11.83 32.47 111.67 9.77 144.42 89.57 45.55 119.89 21.25 21.83 299.61 208.55 264.46 151.70 23.25 13.65 11.64 58.56 32.51 49.31 50 E11a_E12a KnownJunction 0 62.90 9.01 42.46 14.65 31.49 161.84 24.60 178.96 102.75 52.73 129.14 66.92 25.81 305.26 184.93 222.59 169.24 17.37 17.51 14.64 68.70 54.87 53.35 51 E12_Aa NovelBoundary 0 12.89 0.00 3.19 1.93 0.00 0.00 0.00 8.05 3.36 3.33 2.58 0.00 0.00 2.35 5.19 7.86 16.18 2.57 0.00 0.00 0.00 3.06 7.85 52 ER12a ExonRegion 1 35.32 16.90 43.44 13.16 46.84 118.49 14.13 157.19 93.48 60.74 144.54 30.24 15.10 296.56 173.48 229.80 150.11 24.56 17.62 15.42 55.16 37.64 53.19 53 E12a_E13a KnownJunction 0 55.12 11.25 56.71 24.41 47.20 119.42 28.40 228.13 126.33 98.29 145.51 37.66 56.33 261.82 235.99 344.95 177.75 48.71 4.80 12.21 88.96 57.99 78.96 54 ER12b ExonRegion 0 29.10 13.22 47.79 19.42 46.83 94.44 19.20 181.92 109.62 80.86 129.50 25.98 28.14 258.23 191.48 312.07 173.30 38.80 3.19 14.36 69.97 48.96 66.81 55 E13_Aa NovelBoundary 0 9.85 0.00 3.16 0.00 4.33 2.27 0.00 9.98 6.80 7.63 5.05 0.00 0.00 2.41 18.54 11.54 9.44 2.49 4.80 3.20 0.00 0.00 16.13 56 ER13a ExonRegion 0 54.11 15.87 62.60 23.81 61.04 137.57 17.91 217.74 131.35 77.76 167.15 27.12 42.25 343.72 246.78 344.79 185.41 44.20 16.28 18.77 79.47 69.13 81.97 57 E13a_E14a KnownJunction 0 76.24 17.69 71.82 31.60 67.32 140.15 22.70 265.54 149.94 97.99 231.16 48.92 58.11 360.12 297.79 325.73 283.31 33.70 17.88 17.71 112.62 32.15 85.53 58 ER14a ExonRegion 0 71.34 12.78 80.84 21.83 56.66 135.63 13.58 221.72 139.53 90.28 198.07 31.85 34.41 354.46 282.16 343.47 223.54 48.09 10.61 23.99 95.12 64.04 65.46 59 E14a_E15a KnownJunction 0 74.38 21.97 91.75 24.27 57.22 143.44 17.75 204.47 127.66 65.14 162.04 42.91 27.11 339.63 344.52 267.88 165.68 36.06 12.99 8.37 84.45 46.72 40.72 60 ER15a ExonRegion 0 55.52 15.08 70.25 18.85 61.19 133.46 18.30 184.88 125.98 67.07 153.40 24.57 24.81 365.88 302.83 320.95 209.40 31.99 9.06 27.47 87.61 52.12 47.75 61 E15_Da NovelBoundary 0 3.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.90 0.00 0.00 0.00 0.00 0.00 0.00 2.88 12.46 62 E15a_E16a KnownJunction 1 75.42 12.30 71.73 20.31 96.69 148.78 14.79 235.97 145.11 68.98 183.68 37.36 12.34 373.18 286.17 480.04 232.91 30.43 18.07 26.21 115.77 59.95 89.29 63 ER16a ExonRegion 0 57.79 5.50 66.86 17.09 68.59 114.27 10.25 186.56 109.70 56.01 153.12 38.69 44.62 317.60 268.51 311.01 178.64 31.50 15.99 18.84 83.70 43.85 62.53 64 E16_Da KnownBoundary 0 51.49 9.27 78.89 16.18 55.09 106.76 6.36 204.34 127.72 50.34 124.35 55.97 46.91 310.26 254.28 274.37 146.70 39.34 8.75 29.72 80.74 33.98 66.58 65 E16a_E19b KnownJunction 0 5.63 0.00 43.79 7.79 19.69 45.71 1.72 80.75 48.29 19.77 40.75 16.81 30.68 89.29 45.49 3.50 0.00 11.28 3.67 12.27 28.48 18.68 19.72 66 ER16b ExonRegion 0 51.60 9.65 52.89 11.50 34.93 110.09 14.55 204.71 112.81 53.45 141.68 24.09 25.07 319.46 265.89 289.57 158.95 37.91 11.67 32.46 70.68 33.53 52.01 67 E16b_E17a KnownJunction 0 31.49 5.92 50.91 14.82 67.15 174.67 13.87 223.48 115.48 64.76 134.40 19.36 31.17 264.47 253.04 225.50 127.26 39.21 12.61 25.63 48.99 34.35 78.79 68 ER17a ExonRegion 0 50.99 6.83 58.06 14.42 50.12 127.58 11.16 183.02 100.82 65.96 125.12 18.06 19.72 335.24 298.27 250.28 164.65 28.79 18.34 26.10 53.00 38.72 44.57 69 E17a_E18a KnownJunction 1 59.20 8.81 63.95 11.25 59.34 138.56 12.54 197.24 115.83 84.88 154.35 12.00 6.82 297.02 312.01 260.44 179.34 26.32 7.72 23.46 44.67 48.62 46.78 70 ER18a ExonRegion 0 27.19 1.72 70.47 14.55 30.26 101.48 6.67 186.88 102.43 82.09 122.52 15.67 16.05 326.70 302.71 252.17 162.65 26.44 14.41 19.02 66.64 44.27 36.90 71 E18a_E19a KnownJunction 0 36.08 2.50 81.10 11.39 24.70 72.40 10.60 246.69 117.76 95.57 122.08 5.85 25.65 320.68 301.26 163.80 205.14 28.85 9.60 15.08 84.39 65.03 56.08 72 ER19a ExonRegion 0 35.86 3.57 45.07 9.29 23.56 78.78 6.16 133.37 64.88 46.44 91.04 13.73 16.68 202.27 178.08 172.15 118.66 19.54 8.10 10.93 55.58 27.54 32.16 73 E19_Da KnownBoundary 0 111.43 0.00 18.42 6.09 43.97 125.33 15.77 91.88 32.87 28.26 62.96 5.40 6.82 199.48 278.51 254.80 100.70 17.95 21.55 11.31 28.79 46.11 71.36 74 ER19b ExonRegion 0 64.26 7.76 32.70 12.16 68.27 105.45 7.66 138.65 64.03 47.37 89.12 10.33 20.32 199.68 205.73 191.83 120.85 12.55 11.00 21.27 42.06 40.32 35.50 75 E19_Ab KnownBoundary 0 189.74 3.03 62.95 33.73 82.09 86.54 12.06 257.53 124.74 85.42 116.98 73.82 46.26 271.88 405.71 288.47 210.85 28.23 9.13 25.82 50.04 63.19 51.30 76 ER19c ExonRegion 0 92.67 26.93 61.73 25.12 113.09 185.63 30.50 203.86 98.33 68.37 133.55 48.23 48.98 274.95 253.95 278.91 156.44 32.12 38.49 41.66 69.40 70.90 67.75 77 E19_Db KnownBoundary 0 105.94 158.79 109.90 93.86 105.94 135.89 74.11 179.04 133.45 109.11 106.03 18.76 46.91 84.17 94.07 223.62 182.23 178.87 135.82 139.53 68.02 62.76 162.79 78 ER19d ExonRegion 0 48.51 4.56 28.08 12.80 28.95 59.50 5.14 86.66 55.05 30.44 79.00 15.48 20.59 124.32 132.16 128.54 85.20 10.79 12.99 9.21 30.89 29.17 26.10