Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC17A9 Gene 0 55.18 0.49 12.47 5.41 7.49 3.99 3.27 10.65 7.79 3.83 199.95 50.67 74.24 312.83 314.55 187.98 163.09 2.17 0.73 2.23 46.40 74.02 172.83 2 370351 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.16 0.00 0.00 0.00 3.14 0.00 0.00 9.54 19.58 9.29 0.83 0.00 0.00 0.00 3.03 2.08 26.43 3 370349 Transcript 1 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 1.79 0.00 31.85 7.65 20.45 19.25 9.27 0.00 30.20 0.00 0.00 0.00 3.15 0.00 20.49 4 428770 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 488738 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 411611 Transcript 0 4.44 0.00 1.12 0.33 0.00 0.56 0.00 0.79 0.39 0.70 19.25 4.75 2.03 17.61 44.39 19.39 19.03 0.00 0.00 0.00 7.51 6.78 40.48 7 459704 Transcript 0 5.40 0.00 1.08 0.28 0.37 0.50 0.19 0.71 0.76 0.00 20.66 6.56 12.76 28.60 17.20 21.01 12.58 0.00 0.00 0.29 3.67 10.01 18.99 8 487303 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 483113 Transcript 0 2.37 0.00 0.15 0.87 1.20 0.03 0.05 1.21 0.65 0.05 10.62 0.99 4.80 9.54 7.08 5.13 5.28 0.03 0.00 0.95 4.16 0.90 9.69 10 IG23_AR1 ActiveIntergenicRegion 0 94.78 337.46 136.51 239.50 166.43 244.49 161.04 141.11 106.49 196.06 96.34 44.65 29.79 109.24 84.11 86.42 90.59 143.89 117.33 183.61 66.61 81.99 61.12 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.16 0.00 0.00 0.00 3.14 0.00 0.00 9.54 19.58 9.29 0.83 0.00 0.00 0.00 3.03 2.08 26.43 12 ER1b ExonRegion 1 2.12 0.00 0.00 1.36 0.00 0.00 2.65 0.00 0.00 1.15 14.98 0.00 0.00 40.60 84.86 34.92 24.76 0.00 0.00 0.00 4.41 5.21 59.47 13 ER1c ExonRegion 0 19.96 0.00 1.96 0.70 3.07 1.05 1.41 5.72 0.96 2.64 98.32 8.88 17.44 157.11 255.75 100.15 82.06 0.00 0.00 0.00 27.06 30.42 108.95 14 E1a_E2b KnownJunction 1 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 1.79 0.00 31.85 7.65 20.45 19.25 9.27 0.00 30.20 0.00 0.00 0.00 3.15 0.00 20.49 15 E1a_E3a KnownJunction 1 0.00 0.00 6.45 1.70 0.00 0.00 0.00 17.37 1.45 1.67 128.45 5.70 12.66 132.50 151.93 61.01 180.64 0.00 0.00 0.00 34.41 56.33 65.99 16 ER2a ExonRegion 0 4.44 0.00 1.12 0.33 0.00 0.56 0.00 0.79 0.39 0.70 19.25 4.75 2.03 17.61 44.39 19.39 19.03 0.00 0.00 0.00 7.51 6.78 40.48 17 E2_Ab KnownBoundary 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 1.65 1.48 35.69 18.61 13.31 40.08 38.20 33.24 8.79 0.00 0.00 0.00 14.27 3.12 7.60 18 ER2b ExonRegion 0 0.31 0.00 1.19 0.80 0.00 0.00 0.00 1.62 2.05 0.96 59.35 8.16 15.15 90.42 112.48 35.13 32.79 0.00 0.00 0.00 10.77 5.91 30.33 19 E2a_E3a KnownJunction 0 0.00 0.00 1.42 0.00 0.00 0.00 0.00 2.14 1.79 0.00 28.22 0.00 6.49 50.68 97.04 54.00 24.40 0.00 0.00 0.00 9.45 17.08 44.64 20 I2_AR2 ActiveIntronRegion 0 4.23 0.00 1.23 1.36 2.68 0.00 0.00 0.00 2.47 0.00 19.76 20.69 15.63 21.84 28.05 36.99 9.90 0.00 0.00 0.00 0.73 9.26 21.54 21 ER3a ExonRegion 0 7.09 0.00 6.41 2.19 7.04 0.47 1.88 10.43 5.50 4.02 175.14 39.60 67.18 284.09 378.06 188.37 156.33 0.00 0.00 0.00 47.94 76.24 207.11 22 E3a_E4a KnownJunction 0 0.00 0.00 6.45 3.20 7.89 0.00 2.25 6.00 3.01 4.86 109.66 29.41 38.15 196.72 162.19 115.18 148.20 0.00 0.00 0.00 40.90 86.16 105.42 23 I3_SR1 SilentIntronRegion 0 3.96 0.51 2.50 0.51 0.67 1.83 0.33 0.64 1.30 1.14 36.89 11.72 6.92 63.88 63.43 18.31 15.39 0.21 0.00 0.00 4.02 8.99 15.68 24 ER4a ExonRegion 0 27.18 0.00 6.26 1.15 5.22 2.82 2.87 11.22 8.18 3.67 240.89 54.06 88.57 381.02 316.30 162.91 200.11 0.00 0.00 0.00 51.77 80.62 180.27 25 E4a_E5a KnownJunction 0 63.79 0.00 10.73 0.00 4.33 4.83 2.21 13.84 15.54 3.57 254.22 49.52 62.01 426.16 370.11 211.65 231.60 0.00 0.00 0.00 58.87 113.65 233.81 26 ER5a ExonRegion 0 31.35 0.00 8.85 1.04 6.74 3.54 1.10 13.31 7.44 2.10 225.38 33.81 88.08 407.18 316.47 181.06 185.31 0.94 0.00 0.00 51.04 75.88 204.07 27 E5a_E7a KnownJunction 0 17.86 0.00 11.80 1.27 4.33 0.00 0.00 9.28 5.96 3.22 145.35 28.81 72.07 290.25 247.48 124.24 152.69 2.11 0.00 0.00 34.60 36.68 183.27 28 I5 Intron 0 7.65 0.17 1.92 1.28 3.15 0.85 0.61 2.27 1.39 1.08 36.90 9.36 15.08 76.95 46.85 37.24 30.39 0.89 0.66 0.27 8.06 18.48 35.43 29 I5_SR1 SilentIntronRegion 1 7.67 0.17 1.92 1.28 3.16 0.85 0.61 2.28 1.39 1.08 36.95 9.37 15.11 77.07 46.92 37.30 30.43 0.89 0.67 0.27 8.07 18.51 35.48 30 E6_Aa NovelBoundary 0 31.56 0.00 4.58 0.00 0.00 5.22 0.00 17.87 1.39 2.79 63.86 35.86 40.58 107.84 63.91 38.02 21.79 6.47 4.80 0.00 0.00 14.76 43.79 31 ER6a ExonRegion 0 12.34 0.00 1.43 0.84 1.10 1.51 0.56 2.12 2.29 0.00 45.41 19.69 31.47 83.34 51.59 58.41 37.75 0.00 0.00 0.88 11.02 30.03 48.27 32 E6_Da NovelBoundary 0 24.23 0.00 6.62 1.60 12.22 5.79 0.00 6.82 9.52 1.45 47.59 6.30 13.64 74.99 64.16 66.39 44.32 0.00 0.00 0.00 5.81 23.27 31.84 33 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.82 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 I6 Intron 0 6.44 0.00 2.14 0.47 1.88 2.57 0.62 1.21 3.44 0.80 26.68 15.97 19.94 71.70 36.69 38.94 34.75 0.00 0.00 0.00 6.18 14.14 29.54 35 I6_AR1 ActiveIntronRegion 0 6.50 0.00 2.16 0.47 1.90 2.60 0.63 1.22 3.48 0.81 26.93 16.12 20.13 72.34 37.02 39.30 35.07 0.00 0.00 0.00 6.23 14.26 29.80 36 ER7a ExonRegion 0 35.85 0.00 9.87 2.24 7.60 5.58 4.26 7.43 7.52 3.86 214.81 62.55 66.77 385.87 254.62 209.90 181.75 0.52 0.00 1.90 52.04 69.16 169.14 37 E7_Da KnownBoundary 0 28.60 0.00 5.09 2.06 8.15 5.56 8.35 3.70 6.48 5.48 181.26 58.52 42.53 329.57 178.01 214.82 177.28 0.00 0.00 0.00 52.33 42.68 162.19 38 E7a_E7c KnownJunction 0 3.85 0.00 1.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.58 0.00 0.00 0.00 0.00 4.61 0.00 0.00 0.00 0.00 0.00 0.00 8.71 39 E7_Db KnownBoundary 0 44.23 0.00 12.51 0.00 11.88 2.90 0.00 9.12 5.24 3.33 106.40 12.60 46.26 169.52 145.87 92.03 82.28 1.87 0.00 0.00 41.39 34.29 101.07 40 E7b_E7c KnownJunction 0 0.00 0.00 4.79 0.00 14.43 0.00 0.00 2.55 1.79 4.81 83.76 29.26 20.29 126.91 161.20 95.79 105.75 2.28 0.00 0.00 14.52 25.11 27.32 41 ER7b ExonRegion 0 36.73 0.00 16.36 1.36 22.35 3.67 4.44 10.78 9.59 8.03 236.27 60.10 61.25 424.09 310.60 231.65 217.28 3.37 0.00 0.75 71.43 64.47 164.45 42 ER7c ExonRegion 0 37.88 0.00 14.41 6.39 7.77 4.69 4.20 8.47 4.84 3.67 167.77 32.90 45.34 302.83 218.84 172.50 146.53 2.15 0.43 2.13 45.31 63.04 189.32 43 E7_Ab KnownBoundary 0 16.60 0.00 9.17 11.72 11.04 8.69 6.54 16.27 13.19 1.67 177.73 37.51 40.58 275.30 249.09 191.06 135.30 4.81 0.00 3.26 59.12 77.83 193.60 44 ER7d ExonRegion 0 61.42 0.72 21.02 10.57 6.26 5.71 6.69 17.74 12.32 3.12 248.32 56.82 72.83 339.34 291.64 226.89 183.02 4.26 1.13 3.18 47.06 79.85 229.16 45 E7_Ac KnownBoundary 0 88.61 0.00 19.60 10.79 4.33 0.00 0.00 23.25 20.86 4.86 234.95 72.77 133.43 315.38 324.62 213.19 192.71 2.16 0.00 3.00 40.40 78.26 266.93 46 ER7e ExonRegion 0 55.51 0.00 10.24 6.89 8.70 3.17 6.04 11.61 11.89 6.16 225.48 69.68 66.44 413.20 341.17 216.59 221.85 3.25 0.00 1.46 53.99 78.98 201.47 47 E7_Dc NovelBoundary 0 16.15 0.00 4.61 1.96 0.00 0.00 0.00 5.42 1.79 0.00 17.32 31.06 6.82 49.80 46.97 0.00 18.61 0.00 0.00 0.00 5.81 8.45 8.71 48 E7c_E8a KnownJunction 0 62.53 0.00 7.27 6.59 7.39 2.33 3.84 10.35 7.90 12.11 203.05 83.28 59.57 337.34 277.15 199.78 252.55 1.74 0.00 0.00 35.58 74.77 207.26 49 ER8a ExonRegion 0 76.02 1.55 9.05 4.95 16.66 2.42 3.08 10.07 8.38 6.02 318.97 56.28 67.35 499.48 408.57 314.13 258.90 4.69 0.00 3.22 79.56 96.92 264.09 50 E8_Da KnownBoundary 0 50.38 3.35 8.78 2.93 4.33 0.00 0.00 5.54 3.27 5.88 88.97 11.70 41.07 251.40 188.76 146.80 79.20 0.00 0.00 0.00 38.92 48.56 171.84 51 E8a_E9a KnownJunction 0 39.71 0.00 7.42 6.19 11.12 2.27 0.00 13.76 6.60 4.57 141.56 55.82 53.24 261.46 288.89 166.96 210.10 2.57 0.00 0.00 25.76 49.17 81.01 52 ER8b ExonRegion 0 38.00 0.34 5.42 5.08 6.13 2.48 2.57 7.35 4.26 4.53 126.93 22.77 39.71 241.85 172.24 122.23 96.88 0.83 0.96 0.93 35.99 63.12 140.00 53 E8_Db KnownBoundary 0 50.16 0.00 7.01 6.76 3.48 5.00 6.23 11.58 6.19 7.36 105.18 39.16 75.32 244.39 144.88 122.45 89.39 0.00 0.00 3.26 39.17 58.54 169.87 54 ER8c ExonRegion 0 28.38 0.00 10.86 4.57 4.70 4.60 2.54 6.71 2.67 2.65 137.78 19.90 47.31 220.68 172.85 105.11 70.27 0.00 0.94 2.31 39.56 55.39 149.77 55 E8_Dc NovelBoundary 0 62.97 0.00 17.83 6.73 0.00 5.79 2.25 2.26 9.49 0.00 149.14 25.21 46.43 279.12 170.72 223.79 109.68 2.03 0.00 2.94 41.02 119.90 264.28 56 E8c_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.32 0.00 0.00 0.00 5.19 0.00 4.68 0.00 0.00 0.00 0.00 8.33 0.00 57 I8 Intron 0 30.54 1.01 8.18 2.53 7.99 3.19 2.31 2.56 3.21 1.70 113.96 27.50 48.25 185.34 149.32 96.86 72.27 2.06 0.00 1.59 40.58 53.39 128.58 58 I8_SR1 SilentIntronRegion 0 15.38 1.36 0.74 0.00 0.00 0.00 0.79 0.00 0.00 1.15 27.58 0.00 10.63 48.40 54.35 10.50 9.68 0.00 0.00 0.00 6.61 10.00 7.83 59 I8_AR1 ActiveIntronRegion 1 32.07 1.00 8.86 2.75 8.70 3.48 2.45 2.79 3.50 1.76 122.06 29.96 51.74 198.20 158.40 104.77 78.03 2.24 0.00 1.73 43.72 57.41 139.57 60 E9_Aa NovelBoundary 0 84.90 0.00 14.96 8.62 11.04 7.38 6.49 17.17 8.65 6.21 182.89 30.31 79.05 300.37 250.94 200.72 125.29 6.30 0.00 2.49 56.65 114.20 240.64 61 ER9a ExonRegion 0 103.83 2.36 14.65 6.69 11.04 8.52 3.01 18.03 11.48 3.96 372.52 103.61 138.78 566.91 483.29 383.07 314.41 2.52 0.00 8.41 71.07 131.69 330.47 62 E9a_E10b KnownJunction 0 111.06 0.00 17.06 7.46 16.21 5.56 4.50 19.26 16.46 4.62 439.59 79.23 153.56 567.72 470.24 379.81 313.51 1.95 0.00 15.66 105.02 98.46 340.00 63 ER10a ExonRegion 0 2.37 0.00 0.15 0.87 1.20 0.03 0.05 1.21 0.65 0.05 10.62 0.99 4.80 9.54 7.08 5.13 5.28 0.03 0.00 0.95 4.16 0.90 9.69 64 E10_Ab KnownBoundary 0 2.89 0.00 0.00 1.93 0.00 0.00 0.00 4.81 1.65 0.00 13.16 0.00 6.66 9.54 6.30 4.27 0.00 2.11 0.00 0.00 8.28 0.00 12.04 65 ER10b ExonRegion 0 109.31 0.00 15.50 11.74 18.97 4.96 6.93 27.15 19.43 7.32 461.85 127.21 201.67 507.20 478.28 346.69 318.54 2.66 0.00 8.95 105.26 135.92 296.51 66 E10a_E11a KnownJunction 0 183.51 0.00 10.11 11.45 27.84 5.05 10.16 22.34 14.55 7.36 402.52 156.95 194.95 489.08 497.93 276.85 330.34 4.23 0.00 2.68 77.78 149.96 250.63 67 ER11a ExonRegion 0 90.81 1.19 15.30 10.54 13.45 6.56 8.50 19.76 13.48 5.21 425.04 81.92 140.86 542.37 498.44 323.12 318.19 1.50 0.00 5.63 87.83 111.32 279.26 68 E11a_E12a KnownJunction 0 140.69 3.16 18.45 9.02 29.63 7.50 4.42 34.87 11.95 3.25 467.64 67.37 124.18 707.87 637.25 442.62 353.06 1.62 0.00 14.64 96.19 133.06 389.00 69 ER12a ExonRegion 0 100.35 3.09 23.63 6.13 16.48 4.94 4.04 30.53 12.68 8.50 403.25 91.46 140.11 599.65 510.31 381.71 317.53 2.44 0.00 9.69 80.47 111.36 343.64 70 E12a_E13a KnownJunction 0 106.83 0.00 31.67 10.92 8.06 2.38 5.87 19.76 14.70 13.78 332.82 98.28 125.32 498.21 526.49 324.62 275.83 4.77 0.00 2.94 74.57 100.97 371.33 71 ER13a ExonRegion 0 68.72 0.00 25.81 8.04 9.63 5.68 2.82 13.48 11.77 9.33 353.21 92.79 120.69 406.25 406.08 235.19 278.27 5.05 0.00 3.97 65.30 91.47 239.04 72 ER13b ExonRegion 0 25.80 0.00 8.22 0.53 3.17 1.01 1.74 1.99 3.68 0.88 46.64 12.48 10.75 122.10 121.99 90.44 61.19 1.40 0.38 0.72 12.09 35.67 48.44 73 E13_Ab KnownBoundary 0 24.00 0.00 6.30 0.00 3.82 4.71 4.11 0.00 2.95 0.00 47.38 24.46 0.00 115.90 158.85 75.36 107.53 3.77 0.00 0.00 13.04 23.45 51.82 74 ER13c ExonRegion 0 107.11 1.08 21.48 10.37 11.38 7.00 4.57 17.31 13.53 6.15 310.83 92.76 137.05 457.05 534.92 280.46 246.51 4.45 1.89 3.56 69.33 116.46 242.77 75 ER13d ExonRegion 1 15.34 0.00 0.77 0.00 2.68 1.38 0.00 1.94 0.00 0.14 7.25 16.24 35.76 33.70 23.94 7.06 9.90 0.00 0.00 0.27 3.03 5.21 21.66 76 IG24_SR1 SilentIntergenicRegion 0 11.28 0.20 0.55 1.23 1.61 0.37 0.80 3.37 0.37 0.00 6.81 4.05 1.64 8.68 11.55 10.46 12.95 0.46 0.00 0.86 6.65 5.45 14.18