Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM189 Gene 0 33.60 52.21 66.46 35.76 27.10 56.74 31.11 60.60 50.23 77.74 49.58 30.82 43.38 69.13 67.44 69.98 45.13 60.65 39.95 44.24 78.83 59.35 62.96 2 453505 Transcript 0 3.03 1.08 4.83 5.05 1.31 0.90 1.69 2.48 9.37 5.68 15.97 13.07 3.76 6.27 4.09 8.54 2.74 8.02 2.04 7.27 15.15 4.31 2.48 3 371652 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 371650 Transcript 0 0.77 6.87 4.66 3.80 5.23 3.61 4.25 7.75 6.25 5.65 3.66 0.46 0.00 3.67 2.90 0.68 2.40 1.90 0.14 6.00 9.18 6.00 4.81 5 371658 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 371656 Transcript 0 2.90 1.84 1.91 0.46 1.21 1.66 2.65 1.74 1.25 3.52 0.44 0.00 1.74 0.91 5.69 2.68 1.49 8.41 5.35 0.96 8.46 1.88 1.33 7 ER1a ExonRegion 0 25.87 18.35 9.60 1.52 4.20 29.44 8.28 10.01 5.36 5.69 19.35 1.41 0.00 16.91 20.77 23.18 17.16 16.61 18.81 20.11 42.91 24.63 40.06 8 E1_Ab KnownBoundary 0 37.78 9.21 16.03 13.12 7.98 13.57 4.06 8.58 20.43 13.24 25.43 5.85 0.00 12.48 35.97 39.73 15.15 34.07 16.19 26.21 36.82 19.04 15.28 9 ER1b ExonRegion 0 2.84 1.01 5.00 2.42 0.09 0.83 0.19 3.09 6.14 9.50 16.47 1.87 2.44 5.61 8.77 4.06 9.29 2.99 1.89 4.55 30.98 5.95 2.15 10 E1a_E2a KnownJunction 0 0.00 0.00 1.66 4.83 0.00 0.00 0.00 0.00 8.10 6.23 17.06 0.00 6.82 6.89 0.00 4.27 0.00 5.06 0.00 2.75 13.71 3.00 0.00 11 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER2a ExonRegion 0 5.54 0.27 6.67 6.19 3.94 2.70 3.07 7.45 9.77 6.77 18.47 6.95 4.46 7.57 7.81 10.06 8.22 8.97 6.13 8.39 17.23 4.43 7.43 13 E2a_E3a KnownJunction 0 3.56 2.96 6.18 4.13 0.00 0.00 1.99 0.00 10.24 4.03 12.37 32.26 0.00 4.36 4.45 11.28 0.00 10.03 0.00 10.67 14.52 5.51 0.00 14 ER3a ExonRegion 0 1.52 2.78 10.02 6.87 0.00 3.97 2.88 6.67 7.32 10.60 21.02 5.01 1.84 14.14 15.52 19.86 8.69 21.26 14.28 24.27 21.96 19.27 31.42 15 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E3a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4a ExonRegion 0 5.81 3.67 1.98 0.92 2.42 3.31 5.31 3.47 2.49 7.03 0.87 0.00 3.49 1.81 6.93 5.37 2.98 9.19 6.93 1.92 11.29 3.76 2.65 18 E4a_E5a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 7.63 3.76 0.00 5.62 0.00 0.00 19 ER5a ExonRegion 0 11.40 10.61 3.59 2.76 1.03 16.00 3.67 1.42 3.47 2.17 3.24 7.35 2.37 3.64 1.75 6.45 2.55 4.30 9.67 4.77 9.35 4.09 2.80 20 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E5b_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER5b ExonRegion 0 15.99 31.63 0.00 2.73 2.68 11.41 2.65 0.00 1.24 0.00 0.00 9.14 0.00 0.00 2.90 5.94 0.00 1.85 3.19 0.00 6.61 4.17 0.00 23 ER6a ExonRegion 0 34.20 37.18 7.50 2.30 3.43 25.22 17.90 3.19 3.75 3.80 0.00 5.61 7.37 1.67 6.38 4.82 0.00 15.88 0.97 4.09 2.71 1.74 5.23 24 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER7a ExonRegion 0 41.04 78.35 101.64 48.68 33.10 87.35 48.11 86.84 66.64 111.83 61.88 50.16 79.73 114.50 114.40 117.38 63.85 93.18 62.35 73.76 107.77 94.39 106.28 26 E7a_E8a KnownJunction 0 76.75 136.88 246.12 128.26 149.92 222.26 104.18 214.45 187.01 316.94 243.38 85.38 102.43 212.08 193.21 154.15 276.11 174.73 104.76 181.52 361.83 104.59 122.07 27 Ix Intron 0 10.18 18.84 15.63 9.05 12.68 13.49 15.55 11.30 11.85 16.82 9.43 4.29 6.54 10.47 18.88 16.61 11.21 18.77 10.82 11.59 15.89 8.40 12.87 28 Ix_SR2 SilentIntronRegion 0 2.96 7.10 18.50 12.06 9.35 7.69 8.32 3.60 8.36 20.39 10.13 6.23 4.05 9.78 28.32 16.61 10.38 24.72 8.90 17.84 15.37 10.19 19.49 29 Ix_AR2 ActiveIntronRegion 0 11.95 22.97 15.16 8.10 12.45 14.62 22.43 11.13 13.14 13.91 9.95 1.78 7.52 10.71 16.70 16.29 14.26 12.05 12.70 9.54 17.92 7.27 7.31 30 Ix_AR1 ActiveIntronRegion 0 12.70 21.56 15.34 8.94 15.52 16.14 12.18 16.48 12.88 19.14 8.89 6.42 7.12 11.11 17.07 17.82 8.58 24.42 10.19 11.06 14.54 9.17 16.45 31 E8_Aa NovelBoundary 0 18.97 28.48 24.57 6.96 61.63 25.78 21.51 29.20 26.45 34.87 14.11 6.30 12.82 14.77 24.85 11.88 4.39 17.33 34.26 18.47 48.06 11.51 8.54 32 ER8a ExonRegion 0 85.47 105.20 241.01 115.01 59.86 131.53 64.52 249.26 198.41 296.15 215.83 125.23 203.81 267.68 229.34 287.56 204.17 210.42 138.44 147.62 315.23 232.18 228.91 33 E8_Da KnownBoundary 0 50.53 62.95 185.30 73.95 36.93 134.70 91.77 152.18 139.09 201.03 118.08 72.17 129.70 139.62 91.97 109.20 69.57 151.84 84.61 79.32 193.30 96.14 45.33 34 ER8b ExonRegion 0 37.67 66.11 70.77 41.74 37.21 69.37 39.22 60.77 51.89 82.08 44.81 29.28 36.32 68.88 70.51 64.69 40.38 62.52 41.02 44.69 73.45 57.47 60.85 35 E8_Db KnownBoundary 0 11.56 49.73 49.08 41.22 48.47 36.00 35.33 51.79 58.33 54.53 19.16 5.70 0.00 19.13 14.71 7.26 13.46 40.87 13.18 41.16 33.98 30.19 27.66 36 ER8c ExonRegion 0 1.54 13.74 9.32 7.60 10.46 7.22 8.51 15.50 12.50 11.30 7.32 0.92 0.00 7.33 5.80 1.35 4.80 3.81 0.29 11.99 18.36 12.00 9.61