Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	NPEPL1	Gene	0	81.07	8.93	153.68	34.71	40.53	71.20	49.13	123.29	107.50	86.41	69.87	15.38	17.74	103.97	110.80	52.79	48.34	20.04	38.58	6.36	129.19	54.44	66.29
2	356091	Transcript	0	96.02	7.33	125.14	26.91	36.82	62.83	56.57	99.73	91.18	67.94	49.57	13.51	8.86	79.27	109.52	35.25	29.85	12.77	35.73	3.24	103.62	43.86	47.24
3	445528	Transcript	0	17.56	3.50	49.04	14.62	17.39	33.38	16.45	22.40	19.38	13.08	11.76	1.47	5.47	31.17	33.54	31.62	15.26	12.66	14.55	1.91	27.34	14.84	19.81
4	371137	Transcript	0	28.81	3.48	84.23	21.10	27.84	20.30	19.24	55.33	39.24	37.47	13.63	1.60	5.55	33.84	31.15	11.31	15.75	13.31	24.17	5.43	41.43	25.66	25.09
5	371131	Transcript	0	4.59	0.85	7.15	1.31	0.89	2.98	1.71	5.19	4.37	4.40	4.91	1.44	0.59	5.96	8.58	1.86	2.61	0.61	1.99	0.18	5.14	3.13	4.53
6	ER1a	ExonRegion	0	0.00	0.00	2.54	0.00	0.00	0.00	1.02	0.00	0.38	0.00	0.00	0.00	0.00	0.37	13.17	2.97	0.00	0.00	1.23	0.00	3.39	1.60	6.33
7	ER1b	ExonRegion	1	13.31	0.00	34.22	2.41	1.91	11.27	6.92	32.61	32.04	21.96	39.84	0.63	4.87	34.06	48.04	25.21	21.64	13.41	15.53	1.20	74.27	13.53	54.24
8	E1a_E2a	KnownJunction	0	10.15	0.00	77.47	13.78	4.07	19.08	1.90	91.92	88.57	43.70	106.29	5.40	14.77	74.05	73.92	47.00	52.64	56.79	44.52	0.00	212.39	35.15	164.24
9	Ix	Intron	0	7.98	1.78	36.16	10.32	6.80	14.46	6.96	22.80	27.26	31.15	12.74	3.04	3.58	15.08	18.99	16.67	10.41	4.11	8.65	3.92	12.17	4.75	6.43
10	Ix_SR1	SilentIntronRegion	0	8.20	2.07	25.84	6.71	5.56	10.77	5.72	19.16	20.30	23.68	10.00	2.48	3.42	11.53	13.51	12.76	9.91	2.89	6.63	2.20	11.30	3.31	7.47
11	Ix_AR1	ActiveIntronRegion	0	7.56	1.16	59.70	18.53	9.66	22.87	9.82	31.20	43.15	48.24	19.01	4.31	3.98	23.18	31.48	25.60	11.65	6.89	13.28	7.80	14.23	8.02	4.18
12	E2_Aa	NovelBoundary	0	38.45	13.09	101.68	48.65	42.61	46.00	41.69	76.64	84.72	82.60	24.90	5.85	14.61	30.73	58.10	39.82	16.92	3.69	18.35	11.76	17.85	21.00	37.39
13	ER2a	ExonRegion	0	38.07	10.00	128.19	30.09	19.25	42.63	37.51	101.60	100.38	99.20	64.90	16.55	18.08	101.73	127.55	62.61	42.38	31.19	42.20	5.86	118.80	36.05	90.61
14	E2a_E3a	KnownJunction	1	74.90	6.58	184.85	40.69	42.87	64.28	76.14	140.93	170.20	113.06	101.97	13.20	48.70	131.26	147.10	117.32	49.93	49.00	51.20	14.57	169.33	59.64	74.86
15	ER3a	ExonRegion	0	97.78	8.07	185.64	35.12	31.14	85.91	56.45	160.22	158.51	119.58	95.63	22.84	29.59	182.41	133.53	66.38	68.53	31.89	42.04	9.77	171.67	53.87	76.73
16	E3a_E4a	KnownJunction	0	120.76	8.75	237.07	46.48	48.56	120.56	71.85	175.43	207.09	143.87	156.67	33.46	26.62	165.87	151.55	102.20	92.75	48.71	30.87	12.14	162.29	58.29	109.52
17	ER4a	ExonRegion	0	120.64	9.81	242.34	48.29	44.57	127.35	80.45	189.19	214.28	153.71	149.22	21.55	32.26	204.66	170.75	116.34	84.21	47.86	64.70	12.60	207.10	89.08	103.57
18	E4a_E5a	KnownJunction	0	169.66	8.49	268.41	54.84	63.50	169.39	96.36	242.83	206.28	156.31	178.10	35.56	60.87	222.91	206.44	114.33	86.68	35.53	55.91	12.53	197.19	122.96	98.51
19	ER5a	ExonRegion	1	135.48	17.68	275.65	55.70	87.35	132.44	96.70	260.41	220.92	169.92	200.97	23.18	63.77	248.23	167.99	111.35	110.58	37.25	64.29	11.13	251.55	114.97	124.56
20	E5a_E6a	KnownJunction	0	134.62	38.81	303.86	68.39	112.22	132.31	114.91	279.30	224.85	168.51	157.51	18.46	67.37	244.75	158.60	97.75	110.05	29.72	45.55	3.20	251.87	100.42	116.18
21	ER6a	ExonRegion	0	92.51	15.26	288.13	57.93	58.85	123.06	74.34	216.31	203.60	145.34	131.67	25.67	32.34	188.90	164.44	87.60	99.67	39.37	60.17	9.39	220.56	120.32	114.20
22	E6a_E7a	KnownJunction	0	178.55	12.89	282.57	51.87	49.32	114.25	83.78	207.14	137.21	121.98	97.02	37.36	35.55	120.08	164.16	66.91	76.30	39.63	77.46	6.01	165.87	113.89	133.76
23	Ix	Intron	0	11.51	1.46	6.83	4.12	8.09	9.07	10.02	14.00	20.98	7.86	17.61	8.08	11.16	21.76	12.17	9.82	12.52	2.51	6.02	2.05	10.32	12.50	10.22
24	Ix_AR1	ActiveIntronRegion	0	40.52	4.87	20.85	13.60	25.06	31.09	31.95	48.42	70.34	24.77	61.84	25.60	36.09	77.47	39.75	34.75	42.66	8.48	18.29	4.95	32.68	43.59	36.74
25	ER7a	ExonRegion	0	117.28	16.09	258.51	64.84	62.95	89.83	53.76	203.31	136.99	110.69	72.46	27.14	22.85	94.32	130.04	78.76	62.29	17.17	45.04	14.65	152.11	84.17	93.45
26	E7a_E8a	KnownJunction	0	164.03	21.51	283.11	68.26	95.16	113.06	77.02	254.66	172.91	123.73	77.91	23.26	13.47	102.54	145.25	82.88	69.00	19.32	48.19	18.02	135.60	99.81	108.75
27	Ix_AR1	ActiveIntronRegion	0	6.38	0.00	4.11	6.89	5.97	4.55	1.09	10.34	2.42	4.38	6.93	7.51	6.28	14.98	17.36	8.77	14.98	3.19	4.03	2.69	6.45	4.92	8.11
28	ER8a	ExonRegion	0	141.56	14.34	247.93	49.64	65.46	143.24	76.36	199.78	150.60	104.10	87.27	21.26	24.10	129.22	153.39	52.88	81.84	24.48	59.26	10.05	177.63	73.11	85.28
29	E8_Da	KnownBoundary	0	13.19	6.05	14.34	1.93	22.50	2.27	3.44	7.48	18.78	13.59	14.42	5.55	0.00	2.47	0.00	15.12	3.74	5.26	3.58	2.62	5.75	7.90	17.67
30	E8a_E9a	KnownJunction	0	157.21	15.06	187.84	62.80	74.45	126.35	81.97	146.80	118.60	92.70	66.07	6.00	40.26	103.30	91.85	56.22	56.57	26.82	52.33	10.87	110.40	72.44	58.56
31	E8_Db	KnownBoundary	0	6.52	0.00	17.86	8.06	3.57	24.30	9.54	7.15	11.63	10.02	0.00	0.00	0.00	4.53	4.45	8.29	4.21	6.72	0.00	0.00	8.83	0.00	4.27
32	E8b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER8b	ExonRegion	0	19.05	8.13	57.59	12.27	24.08	31.17	25.16	31.11	35.82	25.23	19.33	8.66	4.69	47.10	43.52	29.72	23.11	18.48	3.19	2.13	44.07	10.42	26.43
34	ER8c	ExonRegion	0	17.56	3.50	49.04	14.62	17.39	33.38	16.45	22.40	19.38	13.08	11.76	1.47	5.47	31.17	33.54	31.62	15.26	12.66	14.55	1.91	27.34	14.84	19.81
35	E8_Dc	NovelBoundary	0	27.63	9.21	48.58	12.29	11.80	9.09	16.87	44.11	24.51	29.01	19.74	5.85	6.82	43.79	43.27	3.42	9.54	10.69	7.81	6.33	22.73	11.33	11.69
36	Ix	Intron	0	24.80	3.85	45.15	15.39	19.36	19.91	16.42	31.96	21.25	18.99	13.49	3.69	4.28	30.78	24.95	23.04	17.92	6.57	13.17	4.58	31.51	19.39	22.01
37	Ix_AR1	ActiveIntronRegion	0	24.88	3.86	45.30	15.44	19.43	19.97	16.48	32.06	21.32	19.06	13.53	3.70	4.29	30.89	25.03	23.12	17.98	6.59	13.22	4.60	31.62	19.45	22.08
38	E9_Aa	NovelBoundary	0	74.68	2.57	74.95	17.15	51.87	30.49	37.41	48.30	38.37	36.51	19.79	12.30	6.82	42.62	40.92	48.45	38.99	9.66	13.84	14.83	34.41	28.72	19.46
39	ER9a	ExonRegion	0	139.52	13.78	232.42	47.12	60.31	101.83	66.46	167.35	138.71	99.07	69.74	24.79	24.21	128.63	151.33	72.07	49.81	25.20	57.18	8.08	156.34	76.30	87.13
40	E9_Da	KnownBoundary	0	85.72	8.49	144.94	33.10	51.27	61.73	48.05	60.05	61.92	49.43	15.64	0.00	0.00	46.56	35.60	7.01	4.11	19.81	22.02	2.94	34.90	27.56	52.50
41	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	E9a_E10b	KnownJunction	0	107.06	8.55	120.69	16.58	14.60	55.76	36.30	113.20	91.09	55.17	45.54	31.51	12.99	104.83	154.77	49.30	35.25	6.96	48.57	5.75	94.64	56.70	68.21
43	ER9b	ExonRegion	0	28.81	3.48	84.23	21.10	27.84	20.30	19.24	55.33	39.24	37.47	13.63	1.60	5.55	33.84	31.15	11.31	15.75	13.31	24.17	5.43	41.43	25.66	25.09
44	E9_Db	NovelBoundary	0	57.79	11.91	134.21	34.43	33.36	33.84	41.12	89.79	74.94	63.39	12.69	0.00	6.33	52.39	70.21	38.96	20.66	19.98	34.17	9.33	35.71	39.62	32.01
45	Ix	Intron	0	36.43	3.89	63.64	13.38	20.47	19.87	20.26	38.31	34.81	22.88	9.04	3.19	2.46	25.64	36.30	10.74	18.24	5.66	14.89	5.43	27.61	21.69	27.46
46	Ix_AR1	ActiveIntronRegion	0	36.74	3.92	64.17	13.49	20.63	20.03	20.43	38.63	35.11	23.07	9.11	3.22	2.48	25.86	36.58	10.83	18.38	5.71	15.02	5.46	27.83	21.87	27.68
47	E10_Aa	NovelBoundary	0	20.97	5.79	36.75	13.12	8.15	12.49	14.66	32.65	38.51	13.94	4.79	0.00	0.00	18.54	19.90	15.72	15.43	8.00	17.60	3.07	25.14	2.39	12.72
48	E10_Ab	NovelBoundary	0	16.74	3.35	59.58	5.93	0.00	10.28	8.66	20.54	26.88	21.11	11.42	0.00	0.00	17.66	13.97	3.67	8.23	4.81	26.54	2.68	6.18	0.00	4.18
49	ER10a	ExonRegion	0	18.34	3.39	28.59	5.22	3.57	11.92	6.84	20.74	17.50	17.59	19.65	5.77	2.35	23.82	34.33	7.43	10.45	0.92	7.96	0.71	20.57	12.50	18.11
50	ER10b	ExonRegion	0	102.59	12.07	173.46	39.02	35.15	81.53	53.97	105.85	124.66	95.14	82.13	18.57	16.57	116.48	156.24	56.35	48.71	11.75	42.93	5.05	140.30	54.21	70.75
51	E10a_E11a	KnownJunction	0	204.11	15.85	221.10	51.04	69.78	94.72	85.06	147.41	171.93	101.75	72.86	6.30	13.15	86.23	146.12	49.73	50.68	25.29	65.51	0.00	161.36	79.54	70.51
52	E10a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.53	0.00	0.00	0.00	0.00	0.00
53	ER11a	ExonRegion	0	111.37	10.13	173.93	35.02	48.26	87.30	81.24	113.78	111.81	93.29	71.78	18.96	19.69	122.45	160.33	38.83	37.71	16.58	39.00	5.65	153.62	57.89	64.69
54	E11_Da	NovelBoundary	0	39.19	0.00	67.35	21.78	7.22	20.39	14.49	26.29	32.49	15.18	4.16	0.00	20.45	14.30	9.64	22.99	8.23	0.00	15.81	3.26	22.98	13.90	7.68
55	E11a_E12a	KnownJunction	0	84.31	2.96	121.11	26.67	45.84	85.18	96.80	119.03	97.45	89.56	60.80	11.10	0.00	107.54	110.27	35.97	21.32	19.40	30.97	2.81	115.40	22.41	36.45
56	Ix	Intron	0	14.55	1.88	35.98	6.88	10.98	13.17	10.73	15.86	12.84	11.40	5.55	4.63	6.34	13.58	17.95	13.11	6.77	4.05	6.54	2.18	15.15	8.55	9.34
57	Ix_AR1	ActiveIntronRegion	0	14.61	1.89	36.12	6.91	11.03	13.23	10.77	15.92	12.90	11.44	5.58	4.65	6.37	13.63	18.02	13.17	6.80	4.07	6.56	2.19	15.21	8.59	9.38
58	ER12a	ExonRegion	0	116.82	10.23	149.05	39.78	60.23	78.02	62.76	143.40	107.04	100.50	67.17	16.23	16.60	113.82	127.03	49.85	48.73	15.69	40.74	5.04	155.03	61.89	68.20
59	E12_Da	KnownBoundary	0	271.31	18.09	164.25	53.67	86.42	127.14	77.28	175.26	139.84	114.70	73.39	36.91	13.64	82.52	95.19	90.57	66.57	15.42	81.04	7.99	152.59	63.38	62.32
60	ER12b	ExonRegion	0	69.25	6.50	111.44	32.18	42.45	54.00	39.01	104.94	74.44	67.87	46.44	13.21	7.34	54.17	72.45	34.67	34.17	8.42	29.12	5.24	93.31	45.01	37.29