Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP4-724E16.1 Gene 0 9.64 2.81 1.29 1.43 8.26 3.07 7.20 3.77 2.31 1.39 11.58 11.69 13.63 10.91 16.37 11.97 10.97 6.10 1.92 2.95 4.78 4.30 19.74 2 424252 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 371487 Transcript 0 0.00 1.02 0.00 0.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 4 ER1a ExonRegion 0 0.34 0.00 0.00 0.00 1.29 0.00 0.64 0.00 0.00 0.00 0.00 0.57 2.12 0.00 0.99 0.00 0.00 0.44 0.00 0.00 0.02 0.00 2.37 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E2_Aa NovelBoundary 0 3.63 3.03 2.84 0.00 0.00 0.00 2.25 2.09 3.01 3.81 0.00 0.00 0.00 0.00 0.00 4.27 0.00 6.14 0.00 0.00 8.90 0.00 7.34 7 ER2a ExonRegion 0 0.91 0.03 0.00 0.01 0.00 0.00 1.14 1.11 0.00 0.00 0.00 1.54 0.00 1.16 1.77 0.00 0.00 0.00 0.00 0.92 0.90 0.00 2.49 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 0.00 2.03 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.20 11 ER3b ExonRegion 0 10.98 11.08 0.79 3.45 8.07 4.72 17.57 2.21 0.80 1.46 5.00 11.70 17.01 9.13 14.24 12.74 5.68 5.46 12.26 12.82 12.25 2.68 7.57 12 E3_Da NovelBoundary 0 24.60 2.43 20.55 31.23 7.64 11.07 8.21 29.57 22.80 23.10 5.05 0.00 0.00 2.88 10.01 4.36 17.95 43.53 7.91 9.20 8.83 14.88 24.16 13 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.52 0.00 0.00 0.00 0.00 0.00 2.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 Ix Intron 0 6.19 0.35 1.10 1.75 10.82 1.42 8.20 2.44 5.39 1.18 16.62 11.52 14.62 18.24 11.02 11.75 13.63 3.80 0.00 0.73 4.36 6.99 25.77 15 Ix_SR1 SilentIntronRegion 0 6.22 0.35 1.10 1.76 10.88 1.43 8.24 2.45 5.41 1.18 16.71 11.58 14.70 18.33 11.07 11.81 13.70 3.81 0.00 0.74 4.38 7.02 25.90 16 E4_Aa NovelBoundary 0 30.52 0.00 1.77 4.73 12.99 0.00 7.99 4.03 8.77 1.05 9.37 17.11 33.11 12.13 4.45 12.05 16.36 6.22 0.00 2.94 6.05 5.45 16.65 17 ER4a ExonRegion 0 10.76 0.57 0.80 1.34 14.72 4.05 7.36 5.10 2.02 1.89 14.46 17.86 22.82 21.28 9.94 8.54 12.35 8.74 0.07 0.96 5.37 7.80 24.49 18 E4_Da NovelBoundary 0 21.26 0.00 1.80 3.33 19.78 8.18 6.32 10.97 4.86 7.44 22.06 6.30 13.64 30.84 8.90 15.47 3.65 20.69 0.00 0.00 5.31 9.25 16.48 19 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 Ix Intron 0 22.60 0.54 0.81 1.61 12.51 2.75 10.98 2.95 2.76 0.90 11.77 2.54 11.27 14.95 12.07 6.56 13.40 4.38 0.00 1.50 3.11 7.17 15.55 21 Ix_AR1 ActiveIntronRegion 0 9.04 0.69 1.23 1.62 9.69 4.39 8.77 3.91 2.18 0.58 16.17 3.66 16.12 19.77 14.24 11.04 20.16 7.54 0.00 2.52 4.73 9.09 22.37 22 Ix_SR2 SilentIntronRegion 0 39.75 0.40 0.36 1.61 16.40 0.72 14.13 2.04 3.64 1.35 7.25 1.41 6.11 10.18 10.36 1.76 5.87 0.73 0.00 0.42 1.31 5.35 8.13 23 Ix Intron 0 18.41 0.58 0.87 0.97 7.17 1.05 10.51 3.20 2.29 0.65 6.83 6.21 12.35 5.18 6.48 3.98 9.78 1.06 0.91 0.20 2.32 5.58 8.43 24 Ix_SR1 SilentIntronRegion 0 18.51 0.59 0.88 0.98 7.21 1.06 10.57 3.22 2.30 0.66 6.87 6.25 12.42 5.21 6.52 4.00 9.83 1.06 0.92 0.20 2.33 5.61 8.48 25 E5_Aa NovelBoundary 0 12.15 3.16 0.00 0.00 20.71 0.00 5.65 12.08 7.78 2.74 37.11 19.96 6.17 4.71 14.59 3.42 23.19 3.86 0.00 3.26 0.00 5.63 7.60 26 ER5a ExonRegion 0 5.64 1.49 3.58 0.95 9.78 0.45 7.75 5.04 3.11 2.92 12.26 9.98 12.68 7.86 13.15 10.88 14.55 2.73 0.00 0.52 3.23 10.67 22.96 27 E5_Da NovelBoundary 0 6.89 0.00 0.00 3.00 0.00 0.00 1.68 5.09 1.42 2.85 29.43 6.30 6.82 4.59 5.93 0.00 17.11 0.00 0.00 0.00 2.59 2.33 32.78 28 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 Ix Intron 0 11.57 0.72 0.97 0.00 4.25 0.00 2.57 0.45 0.32 0.90 3.75 3.69 3.70 4.11 2.17 3.15 8.16 1.30 0.00 0.75 0.78 3.31 7.26 30 Ix_SR1 SilentIntronRegion 0 11.65 0.72 0.97 0.00 4.28 0.00 2.59 0.46 0.33 0.91 3.78 3.71 3.73 4.14 2.18 3.17 8.21 1.31 0.00 0.75 0.78 3.33 7.31 31 ER6a ExonRegion 0 14.31 3.92 1.56 1.97 9.77 4.62 8.73 4.97 3.46 1.56 16.90 15.58 16.77 14.17 25.93 18.49 15.58 8.96 2.39 4.00 6.15 4.25 27.41