Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PTPN1 Gene 0 164.41 120.91 113.50 106.95 169.57 139.50 110.73 148.08 161.65 185.62 378.42 303.45 394.94 466.29 484.33 303.63 391.89 118.70 118.45 112.50 169.47 165.46 134.41 2 371621 Transcript 0 148.84 99.58 69.24 79.24 133.57 127.09 99.62 141.47 181.30 202.49 479.84 463.20 744.88 593.26 597.67 412.70 513.99 144.47 161.84 151.94 210.83 198.03 153.29 3 ER1a ExonRegion 1 74.13 31.13 14.78 14.09 28.86 43.97 34.27 22.08 44.93 55.59 186.59 36.66 109.34 116.98 172.07 88.04 218.99 25.22 39.82 58.11 111.70 40.11 48.72 4 E1a_E2a KnownJunction 1 28.97 42.62 56.83 43.78 67.23 54.06 44.60 81.86 130.76 170.98 538.82 126.94 273.03 390.67 457.26 217.98 602.15 129.33 218.45 108.66 207.39 190.07 133.68 5 I1_SR5 SilentIntronRegion 0 16.16 14.97 7.89 7.09 12.02 7.04 47.30 16.62 29.19 5.94 3.62 10.71 19.53 0.00 18.15 16.64 17.40 0.00 10.25 7.93 3.97 1.02 22.75 6 I1_AR9 ActiveIntronRegion 0 43.80 14.75 12.17 11.13 15.89 4.56 16.94 36.15 32.08 16.94 1.20 15.81 44.35 2.28 28.62 27.97 21.43 10.04 6.02 10.39 14.26 2.80 42.00 7 I1_SR8 SilentIntronRegion 0 42.51 19.20 15.64 15.30 21.23 6.22 17.05 27.10 25.13 12.61 3.10 11.18 19.64 1.44 25.03 19.86 14.26 3.78 7.45 9.83 3.91 3.96 24.11 8 I1_AR10 ActiveIntronRegion 0 44.84 13.27 13.54 18.10 30.41 3.15 22.64 32.67 24.87 22.87 2.27 18.33 14.62 1.57 23.04 15.85 12.21 4.24 6.22 9.43 5.76 3.48 27.45 9 I1_AR11 ActiveIntronRegion 0 104.57 22.92 7.30 16.91 12.66 2.83 22.58 25.71 23.83 12.58 0.41 11.66 18.10 1.20 22.37 7.84 6.38 4.19 3.81 5.34 5.15 0.72 25.59 10 I1_SR10 SilentIntronRegion 0 15.39 6.24 7.56 6.06 14.47 1.24 10.47 10.83 15.86 7.59 1.34 3.32 7.77 0.60 14.51 13.18 6.80 4.10 2.16 7.52 5.46 0.54 29.84 11 I1_AR15 ActiveIntronRegion 0 20.24 14.95 8.10 12.77 18.90 3.24 20.37 18.92 25.25 12.03 2.79 14.74 14.89 1.61 20.04 12.54 15.58 2.78 2.90 14.19 1.42 0.84 27.29 12 ER2a ExonRegion 1 35.33 48.87 48.00 45.84 73.89 57.53 41.94 88.25 133.51 160.60 316.12 325.09 962.38 420.40 554.75 354.30 349.28 139.49 141.80 146.67 135.35 124.30 193.27 13 E2a_E3a KnownJunction 1 66.97 80.84 43.85 68.49 134.72 108.18 83.91 139.32 157.09 177.42 335.30 760.00 1461.27 553.89 885.97 396.65 360.45 146.70 144.38 165.16 154.51 175.86 169.53 14 I2_AR2 ActiveIntronRegion 0 41.33 7.05 0.94 5.48 11.34 0.71 8.16 5.96 5.20 1.76 0.99 4.68 8.08 1.22 6.56 7.64 4.66 2.60 4.50 2.73 4.25 1.34 5.28 15 ER3a ExonRegion 0 55.16 146.28 64.62 83.15 216.39 246.85 161.67 152.81 200.30 233.41 569.15 489.66 752.54 683.27 613.11 340.79 585.01 129.14 188.31 163.03 229.53 190.10 110.98 16 E3a_E4a KnownJunction 0 92.02 208.12 63.16 64.23 226.40 170.47 147.46 128.40 212.32 232.65 466.17 451.50 850.59 605.16 390.26 330.60 588.97 109.98 80.57 109.75 230.06 188.35 81.61 17 ER4a ExonRegion 0 192.97 132.14 87.79 95.94 145.79 122.27 113.93 175.34 258.48 273.55 581.16 660.35 1045.59 707.64 610.26 422.58 591.76 169.34 176.42 187.88 241.23 248.61 155.32 18 E4a_E5a KnownJunction 1 865.93 202.99 126.34 180.13 206.88 189.95 184.16 273.72 333.42 367.93 987.83 1304.38 3007.59 1230.74 1923.24 884.81 948.76 197.24 428.72 355.57 372.21 471.80 279.99 19 ER5a ExonRegion 0 211.96 102.86 95.25 104.67 167.33 126.84 141.01 201.21 266.89 271.25 717.76 854.22 1295.37 753.25 667.62 514.76 687.45 172.30 159.13 219.23 202.74 294.65 148.58 20 E5a_E6a KnownJunction 0 269.60 176.15 99.11 96.72 278.10 126.18 144.54 181.55 220.40 249.39 524.66 705.83 880.62 580.97 543.55 531.57 571.20 142.06 164.99 174.62 176.56 327.29 166.20 21 ER6a ExonRegion 1 86.26 132.52 64.58 67.24 138.32 133.44 110.66 141.33 178.19 205.85 507.69 745.72 795.36 594.31 491.25 412.04 545.25 145.90 117.84 159.12 249.71 226.96 153.10 22 E6a_E7a KnownJunction 1 101.57 87.62 59.25 64.63 144.31 133.62 108.46 148.11 164.52 192.79 374.41 569.74 507.27 726.77 687.93 587.97 426.09 195.62 243.87 183.19 248.04 218.48 167.48 23 ER7a ExonRegion 0 77.95 64.06 73.70 73.55 115.34 122.63 94.65 150.20 172.63 197.12 532.81 413.81 444.89 624.26 457.27 416.63 586.30 152.44 140.31 146.94 276.17 163.74 157.11 24 E7a_E8a KnownJunction 0 197.89 96.50 93.43 124.03 123.68 154.06 86.47 180.15 220.60 231.17 599.99 363.12 385.04 697.40 525.25 613.17 683.68 232.10 282.46 179.54 254.09 211.62 200.77 25 ER8a ExonRegion 0 133.45 67.60 50.25 60.55 107.26 140.24 80.31 125.90 145.20 166.67 447.54 245.54 368.54 584.46 486.30 401.38 512.17 153.97 146.20 118.60 220.02 138.00 157.63 26 E8a_E9a KnownJunction 0 42.97 45.45 49.41 79.91 61.80 156.90 99.19 140.23 150.29 199.32 388.84 190.56 284.72 617.46 470.73 396.31 472.00 174.97 106.64 150.27 204.73 115.61 169.62 27 ER9a ExonRegion 0 42.68 49.44 43.06 43.74 51.52 87.91 58.05 105.98 150.27 155.26 409.55 170.42 204.76 475.70 477.55 299.87 405.44 134.62 100.55 117.31 202.22 131.58 141.02 28 E9_Da NovelBoundary 0 55.94 62.82 24.30 36.13 48.13 85.97 63.02 45.43 55.76 81.77 52.33 51.32 47.72 174.82 94.94 125.52 140.07 79.18 85.46 116.07 40.77 25.04 49.60 29 E9a_E10a KnownJunction 0 41.41 27.23 28.03 55.14 35.82 82.34 30.16 84.61 141.90 115.08 306.60 151.70 253.39 480.67 447.00 357.34 300.98 83.32 79.91 47.62 145.55 137.59 143.92 30 I9 Intron 0 52.59 104.23 41.37 35.50 77.53 78.23 74.49 56.95 55.66 91.42 81.89 106.54 93.04 158.58 114.90 106.15 135.97 69.60 62.38 72.49 54.10 59.67 49.35 31 I9_AR1 ActiveIntronRegion 0 52.67 104.40 41.44 35.55 77.66 78.36 74.62 57.05 55.75 91.56 82.02 106.72 93.20 158.82 115.09 106.32 136.18 69.71 62.48 72.61 54.19 59.77 49.42 32 E10_Aa NovelBoundary 0 22.23 104.59 72.20 53.71 93.97 63.43 54.98 90.98 79.08 114.06 96.87 63.47 39.12 278.36 224.98 156.03 178.12 173.52 95.91 66.22 61.47 92.77 93.98 33 ER10a ExonRegion 0 210.76 149.57 154.08 139.74 214.20 157.21 127.38 166.95 163.03 191.33 325.90 235.56 270.50 428.03 494.30 274.47 329.83 111.27 114.57 95.51 143.96 167.90 134.02 34 IG43 Intergenic 0 32.08 16.70 5.33 5.77 19.65 2.75 6.69 11.59 15.26 4.99 1.83 11.66 9.10 3.35 10.98 7.51 8.60 2.54 8.30 4.37 4.87 11.68 28.75 35 IG43_AR1 ActiveIntergenicRegion 0 42.00 17.57 7.01 7.36 23.64 3.70 8.76 14.84 19.03 5.65 2.47 14.22 10.53 3.83 12.51 9.51 10.57 3.14 9.86 5.23 4.23 13.34 33.21 36 IG43_SR1 SilentIntergenicRegion 0 3.89 14.28 0.56 1.24 8.33 0.05 0.81 2.36 4.55 3.14 0.00 4.41 5.08 1.98 6.67 1.82 3.02 0.84 3.89 1.95 6.73 7.00 16.14