Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF840 Gene 0 0.55 5.69 3.89 7.37 5.96 1.35 7.57 4.58 4.19 3.93 0.00 0.25 0.92 0.24 0.49 0.14 0.00 1.37 0.68 3.53 0.21 0.20 1.04 2 442886 Transcript 0 0.30 1.89 1.36 3.40 4.20 0.43 2.83 3.01 2.13 2.07 0.00 0.23 1.01 0.10 0.11 0.28 0.00 0.82 0.34 1.80 0.12 0.12 1.04 3 328749 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 IG39_AR3 ActiveIntergenicRegion 0 0.57 1.20 4.63 11.66 14.43 5.84 7.80 5.87 16.81 8.42 0.00 0.97 0.00 1.04 2.15 0.00 0.00 9.05 5.18 5.44 0.60 0.00 3.08 5 ER1a ExonRegion 0 0.00 0.89 0.00 0.00 1.17 0.00 3.46 0.10 1.60 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.71 0.00 0.00 0.00 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 0.00 0.73 1.63 2.15 0.87 3.19 4.04 2.96 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.95 0.00 1.71 0.00 0.84 0.00 8 E2_Da NovelBoundary 0 0.00 9.67 2.75 8.99 3.57 2.90 17.40 7.48 10.24 9.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.65 0.00 2.81 3.09 0.00 0.00 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 0.00 0.02 0.00 0.06 1.42 2.75 0.06 1.46 0.00 0.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.69 1.13 0.00 0.00 1.56 11 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER4a ExonRegion 0 1.91 5.86 3.58 9.35 10.58 0.66 8.48 7.45 2.99 2.91 0.00 0.00 0.00 0.48 0.00 0.00 0.00 2.33 1.15 4.04 0.00 0.38 1.59 13 E4_Ab KnownBoundary 0 0.00 0.00 1.33 19.08 4.33 0.00 12.14 0.00 4.54 4.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.89 0.00 5.50 0.00 0.00 0.00 14 ER4b ExonRegion 0 2.06 4.62 1.85 12.73 4.69 2.38 8.49 5.02 3.84 2.18 0.00 0.00 2.51 0.96 0.67 0.97 0.00 3.70 2.07 4.49 0.72 0.68 2.94 15 E4_Da KnownBoundary 0 0.00 6.64 2.37 5.76 16.04 0.00 18.72 7.19 4.48 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 16 E4a_E4c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4c ExonRegion 0 0.00 4.40 2.25 12.42 15.68 0.00 6.40 6.55 5.17 2.08 0.00 0.00 0.00 0.53 0.00 2.76 0.00 2.62 0.52 1.39 0.51 0.00 3.07 18 E4_Ac KnownBoundary 0 0.00 8.55 5.26 13.95 17.66 0.00 3.36 4.72 4.51 1.67 0.00 0.00 0.00 2.59 0.00 3.67 0.00 2.07 0.00 3.26 2.47 0.00 0.00 19 ER4d ExonRegion 0 0.29 8.38 4.53 8.96 5.27 2.25 10.03 4.26 4.50 4.68 0.00 0.29 0.32 0.26 0.70 0.04 0.00 0.89 0.62 2.97 0.12 0.00 0.65 20 E4_Db KnownBoundary 0 0.00 8.88 4.44 6.33 16.81 0.00 7.33 9.12 4.57 2.77 0.00 5.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.34 21 E4b_E4d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER4e ExonRegion 0 0.00 7.21 4.37 8.13 6.61 0.00 1.88 7.56 6.19 5.93 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.32 0.00 4.45 0.72 0.00 4.18 23 E4_Ad KnownBoundary 0 0.00 9.47 8.81 10.29 7.05 0.00 8.70 11.17 11.05 9.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 11.38 2.90 0.00 0.00 24 ER4f ExonRegion 0 0.00 6.59 7.05 7.17 7.35 0.67 8.02 4.91 6.62 5.55 0.00 0.43 0.90 0.00 0.74 0.00 0.00 1.29 0.39 5.41 0.42 0.25 0.71 25 E4_Dc KnownBoundary 0 0.00 16.31 4.49 12.49 12.48 2.73 23.05 8.17 7.41 18.64 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.27 0.00 0.00 0.00 26 ER4g ExonRegion 0 1.12 0.53 2.63 2.36 4.43 0.00 4.80 2.92 2.39 7.51 0.00 0.00 10.11 0.00 1.09 0.00 0.00 0.00 0.00 1.55 0.00 0.02 0.00 27 IG40 Intergenic 0 9.26 37.54 11.55 28.83 19.64 12.65 14.48 13.84 13.20 22.46 0.00 3.58 6.05 0.90 2.22 0.58 0.18 4.68 7.06 11.87 1.34 3.55 1.79 28 IG40_AR1 ActiveIntergenicRegion 0 42.84 168.83 44.37 118.85 78.74 54.46 48.83 53.16 47.18 93.20 0.00 13.67 22.30 3.45 7.66 2.58 0.66 15.86 28.21 39.10 6.16 13.87 6.06