Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	SS18L1	Gene	0	72.32	216.77	58.83	94.38	98.14	202.74	93.89	92.20	90.19	100.19	48.59	63.42	37.92	54.74	41.18	52.97	40.04	94.84	63.20	95.12	26.19	46.52	46.74
2	421564	Transcript	0	9.67	9.56	9.23	6.45	17.30	121.89	36.10	4.90	9.35	12.27	20.49	0.00	0.00	14.89	27.37	44.28	28.39	48.23	71.78	47.73	9.33	10.28	53.84
3	450482	Transcript	0	0.81	0.89	4.92	4.37	5.62	3.80	5.96	5.13	4.24	10.71	16.96	6.29	8.25	18.29	9.78	10.73	16.29	14.83	8.87	9.60	5.51	4.33	12.54
4	331758	Transcript	0	29.02	105.97	16.57	33.36	39.37	113.73	49.92	32.08	34.26	36.82	26.87	13.38	15.21	27.53	12.57	33.77	20.14	71.17	39.34	48.75	17.17	19.51	37.28
5	370848	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	491916	Transcript	0	5.58	18.55	5.99	12.20	6.07	14.85	10.68	10.06	13.48	12.57	9.27	10.37	11.35	11.20	16.23	11.95	12.37	23.96	16.95	14.78	16.58	8.49	27.03
7	492466	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1a	ExonRegion	0	9.67	9.56	9.23	6.45	17.30	121.89	36.10	4.90	9.35	12.27	20.49	0.00	0.00	14.89	27.37	44.28	28.39	48.23	71.78	47.73	9.33	10.28	53.84
9	ER1b	ExonRegion	1	14.14	25.68	19.66	15.86	24.65	202.13	53.62	17.49	43.29	48.24	35.74	1.15	1.60	36.47	25.40	80.44	49.34	101.23	121.52	85.29	15.24	20.02	74.95
10	E1a_E2a	KnownJunction	0	0.00	0.00	1.71	0.00	0.00	2.61	0.00	0.00	0.00	1.18	12.00	0.00	0.00	14.24	0.00	0.00	4.11	4.35	0.00	2.62	0.00	0.00	0.00
11	E1a_E3a	KnownJunction	0	0.00	6.58	8.69	11.29	8.66	7.55	3.93	24.15	37.93	46.34	32.43	6.30	6.66	7.06	4.45	12.73	27.58	68.94	13.74	11.95	13.59	5.57	12.46
12	I1_AR4	ActiveIntronRegion	0	4.46	2.12	7.01	4.09	3.15	1.10	5.05	11.91	8.24	14.38	3.56	2.99	2.94	4.72	9.71	19.49	10.53	11.20	5.01	8.19	4.77	2.32	5.05
13	I1_AR5	ActiveIntronRegion	0	13.15	6.25	12.08	1.36	3.63	0.00	6.43	12.84	6.97	6.39	2.62	4.33	4.69	2.78	12.02	18.68	16.27	8.18	8.42	8.51	0.47	4.17	7.76
14	I1_AR6	ActiveIntronRegion	0	13.91	8.13	9.28	2.73	2.68	0.00	5.77	13.83	7.23	6.88	3.31	4.95	1.34	4.52	15.96	16.35	7.07	9.50	9.56	6.38	3.62	2.23	8.81
15	E2_Aa	NovelBoundary	0	10.22	18.15	3.61	12.62	8.06	11.07	36.08	14.79	14.00	23.13	12.48	6.30	0.00	7.42	21.39	7.18	23.56	28.23	13.18	23.59	9.14	2.27	16.56
16	ER2a	ExonRegion	0	2.92	1.69	6.95	5.29	7.10	5.22	9.64	8.87	8.98	18.77	24.20	11.49	11.74	26.41	20.70	25.29	30.35	26.02	14.72	17.09	7.11	11.01	28.57
17	E2a_E3a	KnownJunction	0	0.00	0.00	4.91	5.46	15.37	2.78	8.26	4.15	2.26	10.10	22.11	11.70	21.26	28.67	15.08	12.22	27.49	9.91	4.05	6.52	2.66	2.51	11.44
18	E3_Aa	NovelBoundary	0	3.33	2.70	8.07	5.76	7.98	2.90	2.08	2.34	7.32	11.60	9.48	6.30	0.00	2.41	5.19	4.27	13.28	37.76	8.19	18.22	5.93	0.00	0.00
19	ER3a	ExonRegion	1	0.66	14.74	19.38	15.19	7.89	15.79	15.66	26.62	50.13	65.72	56.10	13.78	12.18	39.65	28.60	25.09	58.82	117.58	41.45	63.72	37.43	19.89	28.30
20	E3_Da	KnownBoundary	0	0.00	2.63	3.49	1.56	0.00	0.00	3.89	6.86	4.98	3.98	5.05	7.50	0.00	4.53	0.00	0.00	3.65	16.75	13.46	14.19	13.71	5.57	3.93
21	E3a_E4a	KnownJunction	0	3.78	10.85	37.31	28.07	3.31	16.30	8.17	37.50	82.93	98.21	41.27	6.60	12.82	53.56	71.08	64.09	52.73	259.79	106.54	133.97	51.15	43.35	61.29
22	ER3b	ExonRegion	0	0.32	1.88	6.10	6.75	0.00	4.58	5.96	7.52	5.71	12.79	9.52	1.95	0.00	3.86	3.34	5.42	3.22	19.03	16.72	12.18	12.29	3.80	10.13
23	E3_Ab	KnownBoundary	0	0.00	2.70	7.33	9.56	4.33	18.57	6.71	8.26	3.21	17.38	11.53	5.70	0.00	4.94	10.38	7.26	4.77	29.39	15.91	6.20	2.47	0.00	16.82
24	ER3c	ExonRegion	0	2.72	4.34	1.29	2.85	0.89	5.49	5.68	5.53	3.01	8.65	6.33	1.88	1.28	2.92	6.48	7.33	3.79	20.58	15.45	4.70	6.55	1.38	4.60
25	E3_Db	NovelBoundary	0	7.41	6.71	5.14	4.96	0.00	5.74	12.01	18.81	9.32	30.09	5.32	12.60	0.00	7.65	14.71	19.91	17.39	54.01	16.85	18.73	14.21	6.06	7.17
26	E3b_E4a	KnownJunction	0	0.00	0.00	0.00	1.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER4a	ExonRegion	0	6.52	19.59	24.09	27.40	3.24	36.81	11.26	36.66	72.33	86.17	55.08	15.54	10.98	82.94	51.78	126.23	79.38	338.62	154.51	133.34	34.04	43.36	133.57
28	E4_Da	NovelBoundary	0	0.00	3.22	11.53	16.75	11.80	13.34	3.84	13.31	17.91	10.72	11.27	0.00	0.00	7.42	19.78	11.02	8.60	32.00	17.88	8.88	13.16	2.57	27.15
29	E4a_E5a	KnownJunction	0	3.04	22.30	12.54	16.25	3.14	70.58	10.78	39.43	39.03	54.45	25.48	12.60	6.82	41.09	25.47	47.42	38.90	206.19	40.75	82.33	7.97	16.78	29.28
30	I4	Intron	0	3.90	7.17	9.80	10.42	7.18	24.10	11.67	8.98	16.81	17.12	12.62	5.76	6.10	17.07	11.58	23.70	19.44	37.49	15.31	18.58	20.92	6.93	22.12
31	I4_SR1	SilentIntronRegion	1	3.98	7.31	9.96	10.61	7.22	24.41	11.84	9.03	17.02	17.34	12.84	5.88	6.10	17.19	11.70	24.05	19.76	38.11	15.58	18.82	21.22	6.99	22.44
32	E5_Aa	NovelBoundary	0	6.74	22.36	29.42	14.55	22.92	40.54	18.59	13.27	29.54	20.93	14.58	25.06	6.82	16.78	27.44	30.25	44.79	57.37	16.66	33.94	26.13	21.06	38.84
33	I4_AR1	ActiveIntronRegion	0	0.00	0.00	2.29	0.95	5.82	9.57	3.45	6.76	6.93	6.48	1.93	0.00	6.93	12.07	6.18	6.59	4.02	7.31	2.22	7.12	6.52	4.44	6.64
34	ER5a	ExonRegion	0	4.29	20.25	24.13	21.07	15.30	107.79	29.25	33.59	54.47	56.12	37.50	16.12	11.35	65.49	40.16	49.87	49.97	181.09	29.90	83.04	37.66	24.89	28.82
35	E5a_E6b	KnownJunction	0	3.33	24.27	24.13	13.29	3.57	63.15	16.03	34.67	65.33	69.60	31.06	24.46	6.01	69.99	32.26	32.81	54.89	209.34	37.74	68.65	37.62	14.14	15.71
36	I5	Intron	0	2.75	6.07	9.24	7.64	3.47	11.18	7.73	7.35	10.27	8.21	4.52	1.49	5.26	8.55	8.66	8.49	6.43	16.32	12.40	14.36	15.73	4.33	15.24
37	I5_AR1	ActiveIntronRegion	0	3.03	6.70	10.20	8.44	3.83	12.35	8.54	8.12	11.34	9.06	4.98	1.64	5.81	9.44	9.56	9.37	7.09	18.02	13.69	15.85	17.36	4.78	16.83
38	E6_Aa	NovelBoundary	0	316.28	263.97	257.38	250.92	237.44	153.89	320.27	277.74	243.95	187.09	57.59	49.52	40.09	29.61	57.11	256.34	161.20	359.15	246.12	323.61	121.45	77.83	212.21
39	ER6a	ExonRegion	0	5.58	18.55	5.99	12.20	6.07	14.85	10.68	10.06	13.48	12.57	9.27	10.37	11.35	11.20	16.23	11.95	12.37	23.96	16.95	14.78	16.58	8.49	27.03
40	E6_Ab	KnownBoundary	0	3.78	11.12	6.24	14.08	0.00	8.18	1.63	11.54	13.60	14.80	4.69	0.00	6.82	2.41	9.27	3.42	12.06	31.63	3.86	14.64	28.85	6.06	19.63
41	ER6b	ExonRegion	0	10.58	27.85	28.38	25.95	16.56	71.68	24.19	44.50	66.17	68.67	43.16	13.21	14.91	71.69	46.10	39.12	42.64	177.65	50.66	91.91	63.56	21.84	37.08
42	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.43	11.18	0.00	3.84
43	E6a_E7a	KnownJunction	0	17.48	50.39	23.80	43.08	24.62	168.48	38.64	51.79	68.17	66.99	67.28	18.61	12.66	92.06	77.14	51.01	30.29	259.95	76.90	90.06	57.08	13.59	43.88
44	ER7a	ExonRegion	0	4.41	36.75	25.92	23.26	13.38	81.94	19.86	41.94	49.13	55.56	34.55	13.29	5.21	59.21	37.96	38.43	32.46	204.72	45.08	70.66	44.59	13.98	30.06
45	E7_Da	KnownBoundary	0	6.96	38.28	35.10	33.63	0.00	46.22	15.63	46.45	49.48	68.18	31.85	0.00	6.01	43.15	20.15	52.81	45.44	182.93	55.81	66.15	31.26	15.92	24.41
46	ER7b	ExonRegion	1	3.64	23.05	20.20	19.12	6.62	60.85	12.90	34.27	46.36	59.37	45.12	5.21	4.54	67.64	36.22	48.83	38.23	100.75	37.98	83.37	42.46	22.92	36.25
47	E7b_E8a	KnownJunction	0	10.30	18.75	23.65	27.04	15.03	85.24	11.88	33.80	59.35	62.56	59.65	23.41	12.66	84.70	42.65	35.55	39.93	136.88	38.50	109.81	46.33	29.21	67.86
48	ER8a	ExonRegion	0	6.62	25.66	23.11	30.20	8.55	90.56	13.08	42.40	68.34	71.06	41.73	13.96	6.67	67.08	35.84	34.79	39.48	122.15	45.00	92.51	37.31	16.59	35.79
49	E8a_E9a	KnownJunction	0	14.60	23.75	29.18	37.59	13.92	103.12	23.98	55.45	73.76	86.23	29.59	6.30	6.49	52.92	31.15	52.55	45.44	219.95	47.25	88.33	42.13	19.53	40.63
50	ER9a	ExonRegion	1	6.71	21.12	26.76	30.06	17.75	108.94	35.33	47.15	74.58	89.50	46.29	4.79	3.68	92.05	46.58	59.25	48.77	170.57	54.05	105.06	47.23	21.48	43.32
51	E9_Da	NovelBoundary	0	0.00	0.00	8.84	10.32	0.00	5.79	4.24	0.00	5.76	10.74	5.37	0.00	0.00	2.41	0.00	8.63	4.30	39.96	0.00	16.17	17.24	8.82	23.22
52	E9a_E10a	KnownJunction	1	3.63	23.42	16.08	27.00	12.14	164.28	22.88	37.09	69.10	86.25	52.33	25.06	6.49	91.71	19.66	26.40	64.80	136.22	35.20	102.91	34.60	18.55	47.63
53	I9	Intron	0	4.45	5.52	7.11	7.45	6.07	9.96	11.83	4.88	6.29	7.63	8.54	7.55	6.87	7.16	8.21	13.04	9.75	23.27	10.79	15.81	11.28	5.63	13.41
54	I9_SR1	SilentIntronRegion	0	4.45	5.52	7.12	7.46	6.07	9.97	11.84	4.88	6.29	7.63	8.54	7.55	6.88	7.17	8.22	13.04	9.76	23.29	10.79	15.82	11.28	5.63	13.42
55	E10_Aa	NovelBoundary	0	3.33	15.00	10.41	14.28	7.05	0.00	12.72	14.46	4.11	25.41	10.21	5.85	21.59	7.83	10.75	12.39	9.16	22.68	4.52	13.04	19.21	6.25	7.77
56	ER10a	ExonRegion	0	14.04	31.79	33.64	25.82	10.52	94.18	15.03	31.01	62.37	75.52	46.10	19.88	9.07	65.59	37.33	58.87	50.59	168.56	38.28	78.01	41.37	19.24	44.20
57	E10a_E11a	KnownJunction	0	33.78	50.71	28.36	23.61	8.40	142.13	8.48	23.95	57.87	77.04	34.38	0.00	6.82	54.45	18.42	51.87	42.64	211.16	62.78	88.72	45.28	18.92	33.29
58	ER11a	ExonRegion	0	12.07	40.66	24.47	24.47	13.59	116.09	28.35	31.09	47.58	59.34	45.98	9.20	8.06	66.54	34.04	40.03	37.34	122.73	36.03	64.83	41.58	20.70	27.88
59	E11_Da	NovelBoundary	0	3.41	17.23	6.33	9.02	3.74	18.57	13.78	16.84	12.47	7.33	5.37	0.00	0.00	4.94	0.00	12.39	13.00	29.10	12.99	2.88	2.97	0.00	4.35
60	E11a_E12a	KnownJunction	0	21.34	70.71	30.69	33.60	69.69	181.20	52.86	55.33	57.64	87.38	38.38	18.91	0.00	76.99	44.26	48.71	31.14	183.64	56.47	95.94	51.09	17.94	35.17
61	E11a_E12b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
62	E12_Ab	NovelBoundary	0	12.30	13.68	6.80	20.04	15.62	17.49	4.15	21.11	19.10	35.14	10.00	0.00	5.68	13.13	13.97	20.59	25.25	67.24	21.74	33.49	11.86	0.00	17.41
63	ER12a	ExonRegion	1	14.21	45.32	27.83	34.66	38.61	125.75	33.29	40.50	48.17	70.94	34.52	14.23	0.00	71.46	45.59	42.03	41.03	149.40	30.49	68.69	44.07	13.10	32.30
64	ER12b	ExonRegion	0	10.76	39.05	30.15	42.28	22.58	88.92	22.46	34.87	56.21	68.60	48.29	13.50	8.46	62.56	29.88	65.28	46.37	172.03	82.50	63.55	31.11	26.39	51.46
65	E12_Da	KnownBoundary	0	0.00	34.01	35.75	46.45	18.25	146.45	20.40	22.55	46.76	54.69	36.54	0.00	6.17	16.83	5.69	56.65	36.19	101.64	49.13	50.24	20.20	12.25	31.67
66	E12a_E12c	KnownJunction	0	3.11	9.74	0.00	5.29	8.66	2.90	11.84	2.55	4.63	6.42	19.43	13.95	6.82	12.71	6.30	4.10	3.93	1.66	3.67	3.07	2.97	0.00	4.10
67	ER12c	ExonRegion	0	38.39	178.82	30.00	55.63	61.53	212.52	88.12	54.28	65.17	66.11	49.05	22.44	27.07	54.13	20.99	65.85	40.28	142.35	77.31	95.37	34.33	37.24	74.57
68	E12_Ac	KnownBoundary	0	230.26	635.74	48.99	71.09	265.87	325.95	298.72	78.20	82.61	120.13	49.54	132.04	80.68	58.69	29.92	52.21	35.16	39.75	46.59	116.39	3.09	60.01	41.32
69	ER12d	ExonRegion	1	85.03	410.09	76.15	150.51	155.52	268.52	159.89	137.04	150.73	164.39	50.56	105.07	84.46	77.72	48.14	41.25	28.04	43.04	35.81	126.59	10.69	76.93	44.41
70	E12_Db	KnownBoundary	1	84.76	353.23	84.00	173.10	232.43	399.15	372.78	150.17	175.78	180.78	52.59	118.54	144.47	61.33	59.58	35.55	39.36	19.69	15.06	153.91	8.28	108.44	29.54
71	ER12e	ExonRegion	0	143.23	396.84	104.40	172.94	187.05	318.19	159.85	162.94	139.42	154.76	60.84	124.18	66.32	58.85	57.98	58.40	43.10	56.84	74.51	123.60	19.54	74.32	44.21
72	ER12f	ExonRegion	0	19.65	33.12	3.15	11.10	17.20	14.93	11.73	9.88	3.35	7.54	4.69	4.33	3.35	0.93	4.14	1.70	0.00	0.00	1.37	2.13	0.00	1.79	0.00