Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C20orf111 Gene 0 165.35 143.25 118.73 142.58 135.12 235.32 67.25 108.98 73.82 128.48 164.18 113.90 66.13 145.64 137.14 140.78 164.02 113.21 91.90 75.32 99.24 131.07 84.98 2 255174 Transcript 1 134.80 105.55 49.30 71.07 65.86 313.66 62.88 55.66 46.98 82.96 102.05 2.84 5.98 63.12 62.11 116.69 99.49 162.02 76.21 56.71 55.07 39.34 81.87 3 372970 Transcript 0 0.00 0.26 0.00 0.57 1.03 2.22 1.82 0.00 0.00 0.00 0.75 3.67 4.01 6.82 2.55 1.26 3.41 0.63 0.41 0.27 1.70 1.61 1.52 4 ER1a ExonRegion 1 151.73 156.78 40.05 59.73 83.92 498.24 100.32 49.13 41.90 69.48 131.88 5.68 5.47 107.41 86.40 145.20 150.64 153.00 91.71 88.30 95.82 70.77 127.81 5 E1a_E5a KnownJunction 1 117.87 54.33 58.54 82.41 47.79 129.07 25.44 62.19 52.05 96.43 72.23 0.00 6.49 18.84 37.83 88.18 48.34 171.04 60.71 25.12 14.33 7.90 35.94 6 E1a_E7a NovelJunction 0 0.00 0.00 1.45 0.00 4.33 16.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E2_Aa NovelBoundary 1 0.00 3.29 15.02 2.06 11.63 4.43 4.06 4.68 19.70 10.77 23.16 31.51 26.30 78.87 19.16 17.09 49.84 18.86 22.31 3.26 28.73 5.20 24.07 8 ER2a ExonRegion 0 0.00 1.57 0.00 0.00 6.20 9.34 4.09 0.00 0.00 0.00 4.48 21.65 7.18 23.77 4.57 6.89 20.36 3.25 2.46 1.64 10.22 9.66 9.03 9 E2_Da NovelBoundary 1 14.22 3.22 28.74 6.03 7.47 0.00 8.08 15.94 20.66 14.16 31.11 12.30 25.97 68.34 4.45 35.97 107.81 25.70 9.13 14.06 77.22 28.04 20.15 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.95 0.00 0.00 0.00 0.00 0.00 0.00 7.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 I2 Intron 0 16.55 10.32 9.71 9.31 21.31 13.71 10.29 12.43 12.90 8.75 21.65 37.32 28.69 30.68 10.69 20.91 44.09 6.53 9.52 8.14 14.36 25.17 15.98 12 I2_SR1 SilentIntronRegion 1 5.75 10.43 9.43 2.96 5.26 0.38 7.94 4.98 14.15 8.02 18.05 19.34 23.40 33.93 7.13 16.15 38.79 10.77 14.40 2.57 32.29 13.86 19.22 13 I2_AR1 ActiveIntronRegion 1 19.79 18.96 25.24 3.51 12.84 8.44 5.96 11.23 17.48 12.24 32.76 32.58 36.46 59.77 20.16 21.55 89.29 22.22 19.43 8.72 64.90 32.29 28.12 14 I2_AR2 ActiveIntronRegion 1 8.92 15.65 11.92 9.08 10.70 10.65 13.98 8.15 15.65 7.16 29.33 45.28 39.00 42.11 12.61 30.84 54.06 19.08 6.73 8.84 35.35 25.13 25.77 15 I2_AR3 ActiveIntronRegion 1 12.63 9.40 15.68 14.85 40.41 31.68 9.72 10.01 22.66 8.38 34.19 30.46 41.40 39.09 9.80 22.24 49.17 15.29 19.44 12.40 32.98 24.36 19.95 16 I2_AR4 ActiveIntronRegion 1 9.35 11.86 11.95 12.04 44.60 17.42 11.69 9.65 21.10 10.80 41.07 37.16 50.42 36.27 8.22 32.45 52.26 17.09 22.03 11.52 30.12 38.02 23.98 17 I2_AR5 ActiveIntronRegion 1 4.48 14.86 7.35 8.49 34.37 8.60 14.51 14.36 17.58 12.00 46.84 29.14 64.04 47.54 19.08 34.07 49.64 17.41 16.17 13.26 24.83 49.44 23.38 18 I2_AR6 ActiveIntronRegion 1 3.09 18.46 3.35 15.67 30.26 8.89 13.44 13.03 14.77 11.16 38.73 36.13 61.87 42.35 10.82 38.07 51.54 12.65 14.82 11.29 20.09 44.48 19.88 19 I2_AR7 ActiveIntronRegion 0 6.91 13.00 5.68 14.49 19.36 14.53 10.07 16.15 9.36 6.46 25.59 74.85 54.55 25.60 10.84 35.04 36.48 9.29 8.55 18.20 20.18 22.70 16.92 20 I2_AR8 ActiveIntronRegion 0 11.35 12.94 6.13 9.79 5.84 12.34 5.18 14.93 6.85 6.46 34.09 78.32 43.49 23.62 8.70 18.10 12.30 10.25 3.19 18.76 8.21 22.92 3.20 21 I2_AR9 ActiveIntronRegion 0 19.55 15.93 4.26 8.76 6.94 12.49 10.88 15.60 9.62 10.73 28.12 47.21 51.37 20.69 5.94 21.30 27.74 11.48 5.61 9.68 2.20 19.69 9.58 22 I2_AR10 ActiveIntronRegion 1 17.96 17.78 4.57 6.63 20.25 35.11 15.17 12.26 12.65 10.15 23.82 37.68 30.80 33.36 9.72 24.38 54.78 5.14 21.22 9.80 12.39 33.56 13.53 23 I2_SR2 SilentIntronRegion 0 12.28 6.68 6.48 7.46 17.17 9.11 9.23 6.74 11.02 8.78 18.60 38.19 23.81 29.31 9.47 17.31 37.90 4.15 8.16 6.53 11.89 16.66 14.62 24 I2_AR11 ActiveIntronRegion 1 20.58 9.23 13.12 10.63 24.73 14.29 11.16 19.43 17.73 10.98 27.06 38.39 24.22 31.83 11.67 22.69 51.93 5.24 11.94 9.44 12.75 30.93 18.32 25 I2_AR12 ActiveIntronRegion 0 20.73 10.18 9.34 10.23 25.19 16.20 9.49 12.11 9.00 6.61 13.72 34.51 25.76 25.61 10.60 17.79 37.90 3.76 5.29 7.07 7.06 24.74 12.19 26 E3_Aa NovelBoundary 1 51.94 9.80 16.74 23.27 28.18 16.98 18.20 17.62 22.16 4.78 32.11 127.69 83.27 22.01 13.35 30.50 49.46 4.15 4.33 5.43 5.62 32.45 11.78 27 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.01 0.00 0.00 0.00 0.00 0.00 0.00 8.56 6.37 7.47 0.00 0.08 0.55 0.00 0.00 0.00 0.00 0.07 28 E3_Da NovelBoundary 1 28.89 17.30 12.95 11.35 75.38 6.81 18.02 20.95 16.75 24.15 27.16 80.43 41.23 29.84 22.99 20.17 54.51 4.56 27.39 10.74 8.59 27.07 0.00 29 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 I3 Intron 1 22.60 7.98 6.77 14.61 20.41 12.79 12.70 8.98 16.05 10.06 18.11 73.49 41.37 23.72 14.54 18.79 51.80 3.01 10.41 6.96 12.01 28.62 12.80 31 I3_AR1 ActiveIntronRegion 1 22.80 8.05 6.82 14.73 20.59 12.90 12.81 9.06 16.18 10.13 18.26 74.12 41.73 23.91 14.67 18.93 52.25 3.03 10.50 7.02 12.11 28.86 12.91 32 E4_Aa NovelBoundary 1 68.90 21.44 8.72 14.02 37.78 2.90 10.60 4.76 16.00 4.27 25.06 99.63 19.64 26.02 26.08 12.22 70.97 0.00 18.07 12.53 6.30 30.56 4.10 33 ER4a ExonRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.37 0.54 5.89 3.23 0.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 E4_Da NovelBoundary 1 37.41 21.58 16.23 10.09 32.00 27.88 27.16 14.21 19.56 12.28 17.27 68.57 13.64 15.66 8.90 4.02 25.25 0.00 0.00 11.31 0.00 26.02 19.63 35 E4a_E5a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 4.24 0.00 0.00 0.00 0.00 0.00 0.00 4.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 I4 Intron 0 61.57 11.61 7.40 8.60 39.90 14.18 9.02 12.33 8.13 6.92 10.68 46.37 20.93 10.87 11.37 15.32 11.55 1.87 7.62 6.27 0.81 31.07 8.11 37 I4_AR1 ActiveIntronRegion 0 62.02 11.69 7.44 8.66 40.19 14.28 9.08 12.42 8.19 6.97 10.75 46.71 21.08 10.95 11.46 15.42 11.62 1.88 7.68 6.31 0.82 31.29 8.17 38 E5_Aa NovelBoundary 0 80.16 16.05 29.36 17.51 59.68 48.38 24.25 28.26 19.85 9.37 31.48 36.16 19.48 9.54 18.54 28.28 28.61 0.00 21.18 9.40 8.59 25.60 7.51 39 ER5a ExonRegion 1 141.11 59.47 67.98 61.92 79.25 81.73 23.99 67.57 54.64 98.08 191.80 78.48 24.28 100.65 89.35 85.56 206.53 78.28 73.43 55.43 116.74 73.56 51.89 40 E5a_E6a KnownJunction 1 89.42 58.15 117.35 113.31 88.12 49.52 12.59 105.93 93.34 163.21 280.33 79.68 66.07 204.19 164.53 149.70 303.79 122.12 170.55 112.75 160.81 133.98 128.47 41 E5a_E7a NovelJunction 0 0.00 0.00 6.89 9.39 3.23 5.45 4.06 7.93 4.40 4.16 15.27 6.30 0.00 7.95 0.00 0.00 4.30 1.78 4.80 6.01 0.00 3.00 3.59 42 ER6a ExonRegion 1 164.18 104.64 135.34 158.87 161.98 223.63 45.20 106.24 89.43 151.88 233.41 185.71 42.46 199.77 187.92 247.47 251.45 189.70 137.47 109.61 144.52 155.15 153.27 43 E6a_E7a KnownJunction 0 187.59 156.55 141.21 122.03 294.14 583.36 126.97 118.91 69.73 138.20 231.22 174.51 53.24 159.75 223.25 135.35 154.37 145.42 84.90 71.33 171.19 114.45 85.88 44 ER7a ExonRegion 0 187.55 169.84 141.55 171.26 156.89 256.81 78.15 130.12 85.03 148.34 176.08 130.78 83.77 162.77 155.91 151.48 170.52 119.09 99.77 81.51 104.40 153.32 87.71