Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DDX27 Gene 0 82.46 93.64 91.89 110.57 65.95 117.66 51.95 72.21 63.63 114.16 164.96 90.60 70.93 173.91 180.56 147.49 133.96 72.13 87.58 62.61 85.96 72.76 61.93 2 371764 Transcript 1 86.90 72.29 108.53 119.67 77.25 153.55 59.02 54.44 68.46 152.23 268.88 98.36 70.53 280.36 359.23 172.01 276.02 77.77 81.70 69.73 146.60 92.19 102.73 3 484427 Transcript 0 13.13 23.14 36.69 39.87 9.27 37.37 9.64 28.62 46.80 60.85 23.10 9.80 18.69 24.65 27.42 36.49 20.68 54.62 38.15 26.55 29.02 19.74 14.55 4 462328 Transcript 0 2.41 2.93 2.93 5.79 2.67 3.78 2.72 4.21 2.75 2.59 3.57 4.99 1.82 1.80 2.69 2.75 8.22 1.86 3.25 3.30 2.29 1.30 5.11 5 493252 Transcript 0 5.05 4.10 6.91 16.88 4.44 10.15 4.78 1.87 8.56 12.85 24.36 5.52 15.64 12.12 8.31 11.25 14.47 3.39 5.30 5.60 5.73 4.26 5.48 6 471144 Transcript 0 15.39 20.47 13.13 38.49 17.83 21.27 8.93 17.94 9.48 18.86 8.58 5.70 8.38 11.91 16.97 8.85 11.15 8.39 11.97 5.90 10.21 12.78 12.53 7 ER1a ExonRegion 0 30.22 32.75 5.90 2.61 18.57 79.41 41.49 3.90 1.45 6.17 32.84 0.00 0.27 44.10 33.74 47.35 35.24 7.26 42.41 14.89 44.28 18.53 25.41 8 E1_Ab KnownBoundary 0 72.01 44.47 20.96 25.20 35.48 114.54 33.70 13.97 5.32 24.36 31.43 0.00 6.82 18.60 47.84 50.59 33.85 18.90 40.00 8.18 47.20 17.02 22.11 9 ER1b ExonRegion 1 179.46 147.87 60.01 67.31 154.53 309.53 104.56 38.55 56.48 90.33 266.49 25.82 35.76 171.52 204.95 250.78 225.61 98.35 150.76 80.69 153.96 63.75 121.35 10 E1a_E2a KnownJunction 0 20.37 30.13 42.90 51.68 3.23 7.50 17.75 19.96 25.06 60.82 100.55 31.66 49.19 60.04 70.21 33.75 77.61 30.01 18.17 22.88 91.31 5.20 3.33 11 ER2a ExonRegion 1 20.34 40.27 96.67 120.20 26.25 58.84 24.80 75.10 83.59 138.85 315.44 56.70 52.74 297.18 286.85 334.68 272.72 130.98 198.94 120.73 176.75 102.69 142.02 12 E2a_E3a KnownJunction 0 37.78 54.27 103.78 191.88 71.14 131.12 65.71 86.13 93.89 172.35 211.47 117.04 109.25 270.47 263.43 290.52 134.74 130.21 217.79 112.17 105.89 123.08 143.92 13 ER3a ExonRegion 0 53.41 87.85 132.93 181.74 206.12 395.40 126.68 124.28 90.08 173.72 338.74 162.21 181.43 345.59 268.61 212.36 259.56 96.54 187.99 127.16 148.53 126.75 73.61 14 E3a_E4a KnownJunction 0 148.03 141.82 198.96 221.52 337.01 713.06 231.94 178.34 105.47 229.43 432.64 269.94 276.61 427.22 357.38 233.36 364.09 87.55 206.12 151.04 196.45 115.18 89.03 15 ER4a ExonRegion 0 132.65 223.14 191.49 230.14 118.14 328.78 137.75 160.64 146.79 258.52 524.96 305.46 216.76 434.05 309.70 349.24 368.29 167.17 226.53 153.92 206.67 206.56 120.83 16 E4a_E5a KnownJunction 0 0.00 0.00 0.00 3.46 3.74 0.00 1.72 1.73 0.00 0.00 2.16 6.30 0.00 0.00 0.00 0.00 9.07 0.00 0.00 0.00 0.00 0.00 0.00 17 E4a_E5b KnownJunction 0 180.25 146.62 189.88 166.68 87.01 186.60 40.63 108.93 118.66 254.01 533.92 367.62 228.56 503.56 347.61 245.23 372.60 139.86 151.25 136.65 193.61 111.14 70.60 18 ER5a ExonRegion 0 4.81 5.85 5.87 8.12 1.61 7.56 3.72 6.70 5.50 5.18 4.98 3.67 3.65 3.60 5.38 5.49 7.37 3.73 6.50 6.61 4.57 2.60 10.22 19 E5_Ab KnownBoundary 0 3.04 6.51 6.03 6.66 0.00 2.61 0.00 0.00 1.79 3.89 5.16 0.00 0.00 7.06 0.00 3.33 8.23 6.09 13.37 2.36 0.00 0.00 8.71 20 E5_Ac KnownBoundary 0 99.87 50.45 113.39 130.35 73.51 78.53 22.83 89.83 92.22 142.34 209.21 167.45 89.93 150.57 88.88 159.10 124.17 82.74 120.10 67.94 79.75 54.31 35.08 21 ER5b ExonRegion 0 179.20 131.50 188.98 191.41 97.52 181.34 37.51 137.70 149.86 269.90 533.69 405.53 232.42 450.60 298.18 300.18 351.00 187.85 212.00 142.55 198.33 118.30 89.40 22 ER5c ExonRegion 0 176.53 122.56 217.95 236.99 107.17 160.33 64.91 151.03 160.60 275.66 508.51 562.36 295.09 506.07 333.72 405.33 415.20 212.49 253.28 151.52 190.83 173.21 118.81 23 E5a_E6a KnownJunction 0 177.96 126.16 231.16 279.55 101.53 180.80 118.27 161.63 168.14 279.87 508.76 632.31 291.21 565.78 381.24 487.31 497.43 222.65 285.75 169.96 210.60 272.61 179.60 24 ER6a ExonRegion 0 112.35 117.67 218.07 283.23 104.72 187.68 98.95 145.53 175.06 326.84 536.90 508.04 304.85 556.05 467.70 506.66 435.76 233.54 317.00 168.30 224.88 313.34 199.08 25 E6a_E7a KnownJunction 0 92.98 87.94 195.56 194.21 59.85 157.58 74.63 142.36 150.23 302.33 386.57 334.91 214.43 306.20 358.00 291.72 274.99 160.01 114.54 164.08 219.74 216.58 111.06 26 ER7a ExonRegion 0 56.00 89.81 146.71 153.09 65.16 126.28 72.93 128.75 116.47 249.19 400.89 403.93 184.56 333.91 281.66 253.51 307.25 121.25 116.31 116.68 195.36 164.82 95.56 27 E7_Da KnownBoundary 0 58.83 118.99 147.22 167.94 68.08 154.74 111.33 136.37 110.59 237.24 453.96 405.13 217.03 382.31 280.98 281.72 329.13 140.73 159.53 83.99 201.76 132.88 106.70 28 ER7b ExonRegion 0 52.91 99.44 152.50 170.42 68.10 178.28 82.62 114.05 106.49 265.52 402.16 421.34 185.36 389.88 298.62 319.31 325.31 129.13 121.51 119.06 203.67 184.53 88.27 29 E7b_E8a KnownJunction 0 76.24 162.14 225.86 230.37 89.05 228.11 119.68 142.81 139.15 346.06 335.87 377.52 154.54 350.76 306.32 358.37 376.81 212.32 131.30 131.35 219.00 245.79 95.44 30 ER8a ExonRegion 0 77.95 129.70 149.98 144.18 67.48 224.07 79.06 106.23 98.33 209.68 332.75 231.90 136.47 382.78 334.59 325.36 230.87 154.40 151.12 104.29 195.18 139.62 127.90 31 E8a_E9a KnownJunction 0 49.71 84.46 140.44 144.07 30.39 152.47 78.74 62.31 58.07 182.18 217.27 139.40 113.30 346.81 338.22 200.55 159.70 143.22 138.36 68.97 150.74 138.02 79.13 32 ER9a ExonRegion 1 53.50 83.52 158.84 142.76 39.62 155.56 65.87 93.55 93.82 211.48 344.47 79.94 82.93 372.10 328.34 266.05 258.56 140.76 102.46 103.68 166.77 108.36 91.31 33 E9a_E10a KnownJunction 0 3.56 6.45 7.48 20.34 8.49 16.64 3.89 0.00 10.19 11.34 34.48 6.75 20.29 9.18 6.30 8.20 11.41 0.00 3.95 2.43 5.62 5.88 3.24 34 E9a_E11a KnownJunction 0 70.16 77.68 170.40 177.47 59.25 166.21 43.10 102.81 84.11 198.46 361.51 109.39 83.11 385.90 287.66 305.73 309.49 185.59 123.11 115.43 158.95 90.20 126.34 35 ER10a ExonRegion 0 4.32 3.24 7.67 8.43 4.83 6.15 6.08 1.06 7.98 11.42 25.34 9.82 7.16 14.81 14.16 9.40 24.42 5.82 7.98 8.67 8.67 4.03 8.84 36 E10a_E11a KnownJunction 0 7.26 2.63 5.59 21.88 0.00 7.67 4.37 4.56 7.52 15.79 13.27 0.00 19.48 12.36 4.45 16.15 7.57 4.35 3.95 5.69 2.90 2.88 4.35 37 ER11a ExonRegion 0 101.89 89.34 191.56 191.05 42.12 185.31 60.07 93.94 112.40 246.02 398.22 135.77 145.63 377.09 356.07 321.14 292.76 157.87 180.23 129.98 162.24 118.61 109.42 38 E11a_E12a KnownJunction 0 115.72 103.99 206.97 203.60 76.06 176.38 82.19 105.11 134.84 221.93 356.72 136.99 215.73 361.94 428.21 374.43 341.19 174.68 169.23 143.30 198.74 121.73 102.01 39 ER12a ExonRegion 0 89.14 112.19 156.78 163.44 68.37 187.26 71.16 100.84 120.03 192.86 399.19 144.41 135.46 358.40 374.91 269.06 337.78 141.30 140.16 115.99 194.10 116.13 89.80 40 E12_Da KnownBoundary 0 92.68 90.05 143.46 133.92 62.65 180.69 53.92 102.69 92.62 188.14 280.44 86.88 159.24 223.26 274.18 182.35 234.22 152.42 112.76 84.31 149.56 108.44 116.09 41 ER12b ExonRegion 0 81.84 84.82 123.60 121.44 49.18 155.85 68.02 72.10 101.90 200.26 314.95 149.69 132.81 326.30 329.86 250.11 263.27 138.13 108.88 104.90 181.87 107.77 131.53 42 E12_Db KnownBoundary 0 0.00 14.14 39.09 35.86 4.33 29.24 21.68 26.94 58.36 57.94 18.00 12.00 12.34 11.54 58.35 23.93 22.72 49.87 31.53 32.34 26.32 11.57 20.06 43 E12b_E12c KnownJunction 0 92.39 74.59 134.29 145.40 64.69 159.85 54.19 59.11 89.38 184.27 334.14 121.54 87.82 285.48 372.95 222.51 330.62 100.94 94.40 97.73 172.42 116.89 125.23 44 ER12c ExonRegion 0 13.13 23.14 36.69 39.87 9.27 37.37 9.64 28.62 46.80 60.85 23.10 9.80 18.69 24.65 27.42 36.49 20.68 54.62 38.15 26.55 29.02 19.74 14.55 45 E12_Ab KnownBoundary 0 12.22 40.45 35.04 41.59 16.38 53.21 17.36 22.10 37.38 56.30 18.90 12.30 12.99 25.31 33.01 36.23 20.01 35.61 33.22 58.87 19.27 18.13 7.68 46 ER12d ExonRegion 0 22.66 29.08 26.87 36.84 26.36 47.82 17.03 28.85 30.14 39.47 15.39 12.91 16.13 25.40 31.25 33.73 23.87 35.43 31.76 25.84 21.37 16.98 18.90 47 E12_Ac KnownBoundary 0 22.60 23.88 22.44 31.20 24.11 42.13 18.02 21.81 23.38 14.24 9.27 6.15 0.00 34.73 8.90 29.74 13.37 20.15 27.29 21.35 9.33 16.96 10.84 48 ER12e ExonRegion 0 103.03 100.97 128.90 142.16 61.16 196.00 63.24 98.19 93.17 177.93 278.51 94.85 80.44 313.81 364.74 216.85 234.17 119.17 119.02 107.72 149.46 93.06 88.66 49 E12_Dc KnownBoundary 0 6.74 19.14 35.07 39.29 12.14 45.60 11.70 29.86 41.43 28.37 13.79 7.65 0.00 15.01 4.45 20.59 27.49 28.06 16.28 28.83 16.00 17.51 11.95 50 E12c_E12d KnownJunction 0 81.42 69.99 82.76 93.93 89.81 147.24 63.86 49.78 47.54 120.18 203.63 75.17 53.24 275.24 345.51 121.51 221.41 54.59 68.99 41.74 120.77 67.48 80.24 51 ER12f ExonRegion 0 39.61 45.43 34.56 57.83 39.74 50.20 23.71 36.84 40.73 43.20 21.36 12.96 12.93 28.25 32.94 36.65 29.58 35.88 31.82 34.67 23.41 22.94 27.29 52 E12_Ad KnownBoundary 0 108.76 85.91 66.05 120.36 97.03 80.07 35.99 41.20 56.25 30.35 17.85 5.85 13.96 41.44 90.86 34.78 23.00 30.84 35.95 31.96 29.71 22.47 19.04 53 ER12g ExonRegion 0 108.49 149.93 127.85 170.66 114.59 183.20 97.63 69.97 69.79 147.88 230.06 60.99 73.42 317.04 406.78 215.31 210.28 81.23 119.12 83.85 133.99 97.44 96.15 54 E12_Dd KnownBoundary 0 19.48 17.17 12.45 23.04 20.37 22.83 5.70 13.39 4.43 20.50 2.53 0.00 6.82 6.53 4.45 0.00 0.00 10.40 9.13 8.12 11.61 8.82 8.45 55 E12d_E12e KnownJunction 0 164.10 209.83 144.52 161.05 114.26 159.34 81.48 95.62 69.94 146.88 312.39 74.42 108.11 420.45 385.32 290.01 266.95 115.74 189.28 110.45 131.28 116.96 106.79 56 ER12h ExonRegion 0 12.64 25.02 16.33 42.98 12.12 23.98 11.47 14.29 8.27 21.50 7.83 4.58 10.16 8.38 9.56 4.55 8.90 10.05 9.06 6.09 15.27 9.72 14.71 57 E12_Ae KnownBoundary 0 13.04 26.31 27.14 50.78 15.53 30.38 23.67 18.61 6.66 23.24 5.05 0.00 0.00 7.06 4.33 3.25 0.00 13.06 7.91 6.52 7.66 12.98 12.38 58 ER12i ExonRegion 0 238.54 209.95 189.12 174.12 114.98 226.48 95.86 120.60 95.38 184.38 295.94 126.78 91.10 342.40 401.29 259.10 253.50 116.36 134.27 86.89 149.72 100.97 110.95 59 E12e_E13a KnownJunction 0 460.45 382.43 255.93 197.28 257.98 354.74 151.88 145.90 75.98 247.94 313.82 215.02 80.51 418.39 505.72 255.57 263.77 105.08 109.84 116.33 127.14 73.97 101.58 60 ER13a ExonRegion 0 356.76 315.83 247.56 216.23 147.97 259.73 140.66 175.37 95.21 221.68 302.11 182.16 160.56 389.86 385.98 286.77 248.46 110.14 123.04 98.97 152.45 121.86 126.74 61 E13a_E14a KnownJunction 0 460.45 447.75 278.82 313.65 230.05 297.84 176.61 204.71 109.81 221.91 351.72 231.23 229.04 429.75 419.80 283.43 330.43 94.31 202.26 132.95 195.59 139.61 143.15 62 ER14a ExonRegion 0 239.33 306.62 260.11 282.18 198.19 263.00 147.73 187.38 119.42 234.67 291.21 235.35 213.10 333.95 406.96 291.04 239.40 107.44 135.76 105.08 150.07 131.02 108.80 63 E14a_E15a KnownJunction 0 231.82 372.04 294.96 384.33 301.10 340.43 191.09 277.37 131.51 282.29 419.11 355.32 209.73 425.81 556.65 385.37 288.83 94.68 199.16 120.74 195.22 195.52 128.90 64 E15_Aa NovelBoundary 0 25.63 19.73 10.73 4.06 3.82 8.12 12.54 23.21 0.00 3.89 5.37 12.15 13.15 9.89 19.66 0.00 12.44 14.09 0.00 10.55 2.47 3.12 4.10 65 ER15a ExonRegion 0 253.45 286.71 270.30 352.03 278.08 354.33 172.39 205.16 138.83 272.94 355.80 252.02 285.20 481.34 541.53 392.01 269.42 103.05 245.14 126.29 178.76 210.83 165.90 66 E15a_E16a KnownJunction 0 378.59 336.06 226.46 374.78 222.84 254.34 161.02 194.69 157.78 249.92 319.40 136.24 160.54 380.54 483.47 280.95 322.67 126.31 195.77 111.02 173.90 192.70 144.86 67 E16_Aa NovelBoundary 0 9.71 9.67 4.88 3.06 30.05 2.67 3.97 8.79 6.05 0.00 2.68 6.30 0.00 2.47 0.00 0.00 4.58 3.90 0.00 5.24 5.25 2.39 0.00 68 ER16a ExonRegion 0 270.73 329.18 235.88 304.43 184.43 194.19 124.71 188.57 109.58 228.09 350.23 185.61 195.96 337.52 446.16 261.31 289.95 95.87 144.21 85.21 157.57 133.95 100.44 69 E16a_E17a KnownJunction 0 355.84 239.23 262.65 345.88 211.12 171.72 156.16 232.93 129.89 246.32 317.08 159.50 197.23 327.21 431.80 231.48 255.82 77.85 137.79 66.35 136.59 143.29 88.69 70 ER17a ExonRegion 0 341.07 339.03 229.88 306.56 242.09 205.93 133.61 202.25 126.81 224.19 390.93 225.58 148.70 417.14 550.91 325.72 276.41 102.07 245.96 109.57 189.99 219.03 129.98 71 E17_Da NovelBoundary 0 16.67 32.76 18.92 15.35 32.60 13.23 11.08 17.99 7.58 19.15 2.58 12.00 27.27 4.94 16.07 19.57 4.77 7.38 18.35 0.00 12.29 14.14 4.35 72 E17a_E18a KnownJunction 0 173.07 192.93 239.23 315.51 166.55 192.79 84.53 174.56 111.17 257.12 264.59 116.59 71.59 327.04 318.07 254.21 201.40 113.00 121.04 78.43 137.58 154.80 86.22 73 Ix Intron 0 21.99 15.48 12.75 19.65 14.85 18.62 8.93 11.44 4.53 8.27 5.67 9.62 5.95 6.43 13.10 9.90 5.24 4.16 9.35 6.08 7.17 6.61 10.95 74 Ix_SR1 SilentIntronRegion 0 18.05 12.53 8.29 17.91 15.85 21.56 9.99 4.81 2.97 9.42 4.52 5.64 4.39 6.06 9.67 10.91 2.66 4.95 9.23 7.07 4.01 9.52 10.65 75 Ix_AR1 ActiveIntronRegion 0 24.33 17.24 15.34 20.74 14.36 17.04 8.36 15.26 5.43 7.66 6.36 11.92 6.87 6.67 15.12 9.37 6.72 3.72 9.46 5.54 8.99 4.99 11.17 76 E18_Aa NovelBoundary 0 53.86 15.00 9.40 36.46 24.28 21.18 6.58 16.88 1.65 15.63 0.00 0.00 6.82 11.95 37.09 16.15 4.77 4.68 14.40 6.01 9.39 2.82 4.35 77 ER18a ExonRegion 0 159.25 180.09 199.07 236.38 142.99 171.99 90.54 152.80 98.76 215.62 310.40 137.85 90.30 333.38 419.48 243.36 202.90 82.73 114.72 77.90 129.96 144.68 109.60 78 E18_Da KnownBoundary 0 35.64 12.17 7.98 16.68 16.72 10.56 0.00 13.55 15.16 16.55 2.05 18.91 0.00 7.53 22.25 8.20 12.90 6.96 4.52 5.62 7.97 10.65 7.26 79 E18a_E18b KnownJunction 0 129.95 176.61 164.99 206.27 116.98 96.36 61.56 152.51 84.37 175.81 340.14 81.03 87.66 296.25 324.74 211.82 196.45 47.42 86.50 53.18 95.32 114.94 73.67 80 ER18b ExonRegion 0 18.15 15.93 9.93 34.00 23.54 18.57 6.39 21.60 10.69 16.22 9.34 6.82 6.60 15.45 24.39 13.15 13.41 6.72 14.88 5.71 5.15 15.84 10.34 81 E18_Ab KnownBoundary 0 17.19 22.63 4.61 28.93 47.79 25.78 3.58 13.31 6.25 14.51 10.53 6.30 13.47 4.71 51.55 3.50 12.62 5.84 0.00 2.88 0.00 12.31 10.59 82 ER18c ExonRegion 0 96.85 92.98 73.98 125.30 66.12 63.22 34.35 85.09 47.29 117.10 129.00 91.42 54.16 137.99 199.58 110.00 82.69 25.21 68.17 41.84 46.88 89.18 34.08