Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DNTTIP1 Gene 0 49.00 63.08 94.48 48.52 51.07 59.79 44.39 57.12 48.00 92.94 104.09 36.77 31.39 122.26 160.46 107.72 94.02 72.93 68.19 50.10 95.84 60.28 59.07 2 372622 Transcript 1 35.53 38.35 14.40 6.81 28.91 57.47 35.30 9.69 4.79 21.63 71.00 0.00 0.17 36.48 60.62 85.77 45.56 48.44 56.09 14.10 58.16 25.78 33.67 3 439990 Transcript 0 2.77 2.18 3.74 1.54 1.58 2.46 3.88 3.96 3.92 3.53 3.87 2.42 0.38 3.39 5.37 2.91 5.22 2.01 2.52 4.98 5.91 2.19 2.23 4 372614 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 372605 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 449078 Transcript 0 3.21 0.91 1.61 0.68 2.94 2.59 2.00 0.57 2.68 1.51 1.13 0.00 0.85 3.67 4.76 3.20 1.47 1.65 0.70 2.79 0.97 2.58 4.58 7 456939 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 415790 Transcript 0 1.55 2.45 2.75 0.64 0.17 5.44 0.18 2.73 2.08 0.81 2.01 0.09 0.13 0.81 1.35 1.32 2.05 0.04 3.52 0.87 0.79 0.04 1.24 9 435014 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 467701 Transcript 0 11.34 11.69 6.41 10.97 3.99 6.60 11.35 9.29 11.01 8.98 3.46 2.03 3.63 3.79 6.94 12.86 8.64 7.97 5.00 9.29 9.66 8.26 4.66 11 ER1a ExonRegion 1 35.53 38.35 14.40 6.81 28.91 57.47 35.30 9.69 4.79 21.63 71.00 0.00 0.17 36.48 60.62 85.77 45.56 48.44 56.09 14.10 58.16 25.78 33.67 12 E1_Ab KnownBoundary 1 122.17 141.16 33.80 14.25 121.39 206.98 136.86 16.10 15.42 51.33 202.37 0.00 0.00 60.69 53.90 313.76 154.46 108.82 187.68 53.50 171.37 91.67 119.94 13 E1_Ac KnownBoundary 1 127.87 106.03 69.42 21.58 82.26 85.69 54.14 37.62 42.16 93.16 147.72 0.00 13.64 68.28 81.83 354.18 230.01 214.69 243.58 67.75 179.96 67.66 224.59 14 ER1b ExonRegion 1 120.19 115.70 56.67 24.09 92.60 133.61 88.94 31.54 29.33 91.51 224.42 0.46 9.38 95.30 200.19 331.60 214.79 156.73 206.93 67.70 208.41 90.48 152.92 15 ER1c ExonRegion 1 47.71 51.48 53.46 23.05 27.45 33.43 22.20 27.21 30.45 86.48 74.72 6.93 3.48 31.32 51.39 119.90 89.22 122.11 68.62 33.68 84.18 35.30 77.95 16 E1_Ad KnownBoundary 0 13.34 17.63 10.70 7.82 0.00 19.25 6.45 8.63 5.73 16.68 14.16 5.70 0.00 12.66 4.70 0.00 4.68 21.85 4.42 6.14 8.53 5.69 8.11 17 ER1d ExonRegion 0 7.45 7.53 21.06 8.38 2.43 9.47 5.93 7.30 13.47 26.61 38.30 10.26 6.25 22.05 30.46 15.03 24.39 20.53 11.86 8.39 36.08 7.06 10.50 18 E1a_E2b KnownJunction 1 14.52 6.71 43.14 21.14 3.82 9.77 11.92 11.21 19.56 38.84 98.08 6.30 27.92 42.56 44.38 17.26 45.54 10.36 18.26 12.14 85.81 8.94 15.62 19 ER2a ExonRegion 0 1.55 2.45 2.75 0.64 0.17 5.44 0.18 2.73 2.08 0.81 2.01 0.09 0.13 0.81 1.35 1.32 2.05 0.04 3.52 0.87 0.79 0.04 1.24 20 E2_Ab KnownBoundary 0 0.00 2.70 1.09 1.50 0.00 0.00 1.90 1.73 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER2b ExonRegion 0 23.25 31.96 50.75 19.63 23.93 12.31 14.37 26.54 27.24 69.75 128.98 36.55 36.18 109.81 157.46 116.89 176.65 63.83 63.21 34.26 130.65 64.35 43.04 22 E2a_E3a KnownJunction 1 44.53 51.24 141.45 64.19 31.07 28.96 31.80 77.30 72.31 172.80 160.57 43.51 83.60 277.95 422.40 384.00 139.88 293.20 200.95 118.37 139.56 210.40 176.27 23 ER3a ExonRegion 1 31.61 48.31 125.48 67.78 26.88 33.09 27.10 62.03 63.70 131.33 157.77 59.94 58.89 230.26 352.08 478.38 101.67 232.24 254.83 107.00 140.01 145.61 197.54 24 E3_Ab KnownBoundary 1 55.71 67.29 153.28 93.16 45.25 24.93 37.49 72.13 74.97 134.79 174.99 85.83 54.70 196.89 323.38 373.41 96.21 203.78 249.61 82.33 153.76 86.16 169.53 25 ER3b ExonRegion 0 38.59 88.97 179.61 76.71 74.92 84.39 46.75 73.99 69.40 123.36 197.19 59.20 58.08 173.97 210.34 164.32 154.32 131.19 88.58 85.64 157.52 64.67 69.91 26 E3a_E4a KnownJunction 0 56.23 151.55 195.59 74.35 194.31 191.65 103.16 80.63 75.06 145.91 212.90 68.72 90.58 179.71 218.06 103.56 177.47 111.47 87.91 76.70 181.32 60.56 69.14 27 E3a_E6a KnownJunction 0 0.00 0.00 1.36 4.03 7.30 10.51 3.75 9.53 0.00 1.32 7.69 6.15 0.00 4.71 6.30 0.00 0.00 0.00 0.00 3.26 6.05 2.27 0.00 28 ER4a ExonRegion 0 68.54 145.31 162.69 75.67 86.33 158.87 124.33 77.20 75.88 148.14 186.89 86.68 66.18 182.44 222.08 93.79 165.64 94.94 68.08 80.36 166.57 80.60 65.23 29 E4a_E5a KnownJunction 0 0.00 0.00 0.00 1.37 0.00 2.50 0.00 0.00 1.79 0.00 2.11 0.00 0.00 4.77 4.45 0.00 0.00 0.00 0.00 0.00 0.00 3.00 0.00 30 E4a_E6a KnownJunction 0 108.54 209.44 262.38 141.61 71.99 165.76 98.62 114.68 96.87 205.84 219.63 84.48 112.33 296.19 335.74 158.42 180.27 148.69 102.12 103.99 202.63 170.66 81.78 31 ER5a ExonRegion 0 6.42 1.82 3.21 0.00 5.88 2.67 4.01 1.13 3.56 3.02 0.15 0.00 1.70 2.58 5.08 6.41 2.93 3.30 1.40 5.58 1.94 2.16 9.16 32 ER6a ExonRegion 0 148.68 135.34 232.34 112.98 159.23 124.14 89.43 121.22 80.60 214.59 215.22 113.88 89.11 327.74 303.03 215.29 222.93 152.08 129.17 111.19 218.68 132.47 115.12 33 E6a_E7a KnownJunction 0 181.22 119.06 237.66 111.51 152.29 81.43 85.19 122.24 72.11 229.03 155.25 105.33 109.73 265.82 285.43 265.74 165.50 181.28 116.80 95.49 158.15 97.73 131.80 34 ER7a ExonRegion 0 138.17 110.81 200.14 94.92 82.71 87.44 71.01 109.77 81.28 184.61 149.34 98.51 85.49 253.68 301.88 256.49 144.66 168.66 149.27 93.65 149.04 93.10 157.65 35 E7a_E8a KnownJunction 0 117.80 109.91 157.86 99.99 67.57 109.14 82.05 117.10 87.27 150.51 124.98 68.27 33.60 275.65 400.64 243.10 119.12 118.60 169.42 94.92 148.39 134.35 161.85 36 ER8a ExonRegion 0 69.59 100.86 146.66 84.47 53.14 105.94 70.15 108.50 83.55 174.09 146.15 72.54 45.67 229.80 246.35 158.36 167.07 94.17 147.03 73.57 178.19 131.23 111.23 37 E8b_E9b KnownJunction 0 76.53 151.03 144.55 73.38 83.96 99.37 93.09 102.77 65.65 185.97 174.73 71.87 59.41 198.78 184.81 120.05 205.70 109.89 80.76 67.75 211.90 84.69 80.24 38 ER8b ExonRegion 0 45.51 108.80 155.01 70.19 66.89 112.78 82.75 104.57 70.40 194.40 164.30 82.26 65.66 194.08 195.83 112.94 199.70 87.77 82.82 70.21 204.94 79.17 80.76 39 E9_Aa NovelBoundary 0 28.82 8.55 14.19 12.39 20.29 0.00 18.68 6.86 8.51 11.58 6.48 5.25 12.50 7.59 0.00 15.72 13.56 8.54 0.00 5.69 5.68 3.12 3.84 40 ER9a ExonRegion 0 11.34 11.69 6.41 10.97 3.99 6.60 11.35 9.29 11.01 8.98 3.46 2.03 3.63 3.79 6.94 12.86 8.64 7.97 5.00 9.29 9.66 8.26 4.66 41 E9_Ab KnownBoundary 0 19.11 12.83 7.54 9.89 4.07 12.72 10.29 8.30 12.96 10.29 4.42 13.65 0.00 2.47 9.15 7.52 23.09 10.16 9.41 5.05 17.42 3.12 0.00 42 ER9b ExonRegion 0 86.78 161.10 181.16 72.20 98.23 152.00 138.78 112.58 71.77 197.22 180.45 79.85 62.33 260.44 236.68 155.41 210.89 129.14 108.44 67.09 192.46 97.05 91.62 43 E9a_E10a KnownJunction 0 140.91 192.86 191.51 70.65 140.07 183.42 179.83 108.44 67.04 154.46 192.05 91.68 85.06 249.46 306.94 165.00 195.51 140.69 105.13 58.16 149.13 109.73 129.07 44 ER10a ExonRegion 0 85.45 181.75 201.09 86.90 137.14 140.49 123.85 108.86 72.31 174.76 164.49 57.82 67.17 227.05 273.36 184.67 131.59 167.64 113.97 97.04 150.30 90.44 116.42 45 E10a_E11a KnownJunction 0 114.32 217.66 214.84 111.21 203.23 140.66 95.61 139.36 92.24 195.64 179.78 55.07 71.59 196.07 333.15 261.30 159.79 211.04 172.33 109.87 173.66 130.06 105.76 46 ER11a ExonRegion 0 149.23 201.99 190.74 96.61 183.40 164.05 105.37 134.03 83.38 203.36 256.82 80.70 80.04 300.70 402.85 338.34 233.39 184.71 195.40 90.41 225.83 172.42 183.56 47 E11a_E12a KnownJunction 0 110.02 111.95 206.50 101.12 133.79 160.53 82.45 142.69 87.67 195.23 281.81 55.67 81.49 339.04 412.26 226.61 231.79 144.22 148.05 102.40 198.12 123.69 168.93 48 E11a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER12a ExonRegion 0 74.02 91.85 192.13 93.93 71.61 84.28 64.19 107.57 81.91 174.35 200.70 47.62 71.85 281.81 371.12 184.89 156.20 119.13 122.46 87.71 167.73 108.49 101.84 50 E12_Da NovelBoundary 0 14.00 21.77 6.71 6.56 11.12 14.42 3.97 18.03 6.77 15.10 0.00 0.00 0.00 9.89 0.00 31.02 4.58 5.80 9.60 0.00 11.86 8.02 16.39 51 E12a_E13a KnownJunction 0 70.83 89.26 185.83 106.05 51.70 40.49 63.33 106.38 78.24 177.05 173.62 75.17 34.09 261.52 294.95 163.72 162.13 99.70 101.84 100.54 175.82 76.66 95.95 52 I12 Intron 0 24.46 26.85 6.70 7.79 15.98 15.77 11.02 13.97 10.69 10.86 3.60 3.47 9.84 5.32 8.04 7.81 6.15 4.68 5.76 8.39 4.34 5.71 4.18 53 I12_SR1 SilentIntronRegion 0 24.62 27.01 6.75 7.84 16.08 15.88 11.10 14.06 10.75 10.92 3.63 3.49 9.88 5.35 8.09 7.87 6.19 4.71 5.80 8.45 4.37 5.74 4.21 54 E13_Aa NovelBoundary 0 32.30 6.58 9.79 3.20 15.96 14.99 8.48 13.72 7.90 9.89 14.42 0.00 6.82 2.71 10.26 11.28 0.00 4.56 0.00 13.68 3.03 2.51 0.00 55 ER13a ExonRegion 0 34.50 78.22 180.98 103.58 54.82 83.59 59.02 116.09 91.03 180.06 175.71 61.22 30.87 236.10 351.25 167.75 151.53 106.01 94.01 102.13 186.80 103.84 100.60 56 E13_Da NovelBoundary 0 6.00 60.52 113.80 70.75 38.46 70.87 40.59 88.27 67.91 105.49 90.44 34.81 19.15 111.54 118.92 93.05 64.24 67.49 37.18 63.15 110.27 62.52 95.95 57 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 E13b_E14b KnownJunction 0 64.68 96.82 160.43 133.22 102.63 141.28 77.64 141.29 126.68 192.14 268.75 69.47 32.79 198.60 392.11 136.89 155.21 150.14 72.85 140.62 169.21 110.53 67.35 59 ER13b ExonRegion 0 42.33 90.73 158.17 114.48 81.71 124.84 61.21 127.51 119.90 187.65 229.72 66.94 36.80 217.13 315.57 139.00 138.64 133.32 67.14 125.70 177.82 110.59 92.17 60 ER14a ExonRegion 0 5.55 4.35 7.47 3.08 3.16 4.91 7.76 7.92 7.83 7.06 7.73 4.85 0.75 6.79 10.73 5.83 10.43 4.03 5.03 9.96 11.81 4.38 4.46 61 E14_Ab KnownBoundary 0 13.78 8.29 10.61 3.70 4.33 5.68 12.94 9.41 13.19 9.16 5.37 0.00 0.00 8.95 0.00 7.52 16.92 2.57 0.00 14.00 16.99 5.33 8.11 62 ER14b ExonRegion 0 95.70 99.04 202.78 113.79 115.17 106.00 80.63 140.74 126.49 191.11 231.00 58.35 50.77 241.25 378.47 181.00 164.52 126.62 125.15 108.17 174.88 113.85 97.70 63 E14_Da KnownBoundary 0 162.55 145.04 208.39 139.48 134.47 119.31 32.11 140.84 129.98 197.35 143.93 94.38 38.80 150.86 284.44 133.30 182.89 139.20 104.47 111.98 140.91 108.63 93.30 64 ER14c ExonRegion 0 42.84 42.11 88.97 48.28 39.36 44.93 22.70 58.12 56.92 86.76 76.72 34.67 19.33 96.51 144.25 51.17 71.47 40.66 42.53 43.16 66.76 60.69 34.55 65 ER14d ExonRegion 0 1.69 4.47 3.06 2.59 5.62 1.10 3.71 0.00 1.36 0.92 0.97 0.00 0.00 1.30 3.19 0.00 3.30 1.66 0.00 0.21 3.53 0.63 0.00