Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HRH3 Gene 0 5.42 39.49 29.63 14.04 8.69 65.89 2.68 9.54 10.58 49.54 0.00 0.00 0.00 0.00 0.08 0.00 0.13 112.63 32.66 49.73 0.00 0.16 0.11 2 440622 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 370797 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 456442 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 317393 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 447971 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 340177 Transcript 0 8.09 59.73 33.72 16.17 12.70 80.52 3.65 9.81 12.94 52.35 0.00 0.00 0.00 0.00 0.21 0.00 0.41 118.16 34.51 54.71 0.00 0.25 0.12 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 1.17 5.40 3.62 2.11 0.84 9.17 0.46 1.29 0.24 9.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.65 10.12 10.09 0.00 0.00 0.00 10 E1a_E2a KnownJunction 0 6.45 21.64 25.40 7.09 3.57 54.74 5.92 4.89 1.65 42.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 133.69 28.05 43.14 0.00 0.00 0.00 11 ER2a ExonRegion 0 1.91 15.56 23.33 13.99 2.53 62.87 1.22 8.25 7.84 53.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 110.73 36.39 58.06 0.00 0.00 0.00 12 E2a_E3a KnownJunction 0 3.19 0.00 24.39 4.66 3.90 60.82 2.16 8.87 10.39 48.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 119.63 16.57 82.13 0.00 0.00 0.00 13 ER3a ExonRegion 0 0.28 8.18 21.76 8.54 4.06 47.88 2.55 17.95 16.56 52.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 124.41 34.58 69.67 0.00 0.00 0.00 14 E3_Da KnownBoundary 0 0.00 23.48 28.18 12.59 0.00 52.41 6.09 17.62 16.58 59.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 190.98 30.12 78.36 0.00 0.00 0.00 15 E3a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER3b ExonRegion 0 7.62 24.62 24.08 7.82 4.75 66.59 4.92 11.40 18.11 58.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 181.80 51.23 65.91 0.00 0.00 0.00 17 E3_Db KnownBoundary 0 0.00 6.12 14.52 3.53 0.00 63.15 2.25 2.55 6.45 24.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68.23 19.95 27.80 0.00 0.00 0.00 18 E3b_E3d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E3_Dc KnownBoundary 0 3.70 12.56 8.37 1.43 0.00 29.41 0.00 7.60 12.79 40.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 79.88 0.00 20.39 0.00 0.00 0.00 20 E3c_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER3c ExonRegion 0 1.91 8.33 12.25 2.01 0.00 44.45 1.32 4.86 10.00 34.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56.75 10.31 28.77 0.00 0.00 0.00 22 ER3d ExonRegion 0 2.02 15.46 13.16 2.35 3.00 62.83 0.83 4.05 4.02 31.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.87 25.10 31.82 0.00 0.00 0.00 23 E3_Ab KnownBoundary 0 0.00 9.93 6.59 3.90 8.23 20.44 0.00 4.68 1.74 21.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46.64 16.75 29.15 0.00 0.00 0.00 24 E3_Dd KnownBoundary 0 3.48 23.22 16.06 7.69 3.65 39.07 1.99 0.00 3.36 25.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66.95 41.32 18.22 0.00 0.00 0.00 25 E3d_E3e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER3e ExonRegion 0 2.12 9.18 10.32 6.37 7.51 29.99 0.60 1.73 2.47 26.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.57 23.43 27.38 0.00 0.00 0.00 27 ER3f ExonRegion 0 5.59 22.94 12.24 6.21 1.82 28.77 2.54 1.51 3.07 25.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.15 16.85 16.76 0.00 0.00 0.00 28 E3_Ac KnownBoundary 0 13.11 51.24 20.93 12.22 0.00 69.34 0.00 5.09 6.77 43.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 98.99 27.58 25.57 0.00 0.00 0.00 29 ER3g ExonRegion 0 4.62 54.71 34.06 16.91 10.08 84.24 1.99 14.09 9.49 51.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 139.56 41.24 52.08 0.00 0.00 0.00 30 E3_De KnownBoundary 0 10.30 58.21 45.74 15.28 15.79 91.03 6.76 15.81 8.56 43.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 169.75 30.78 59.95 0.00 0.00 0.00 31 E3_Ad KnownBoundary 0 0.00 86.63 32.79 26.04 19.35 60.53 1.99 11.01 8.30 90.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 149.15 40.28 52.28 0.00 0.00 0.00 32 ER3h ExonRegion 0 4.23 74.43 50.24 29.17 17.30 72.74 4.41 19.70 14.57 95.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 158.17 35.46 76.88 0.00 0.00 0.00 33 ER3i ExonRegion 0 6.21 59.60 73.91 35.79 14.98 102.67 3.27 24.05 17.33 110.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 202.52 54.32 91.88 0.00 0.47 0.66 34 E3_Ae KnownBoundary 0 17.71 77.55 75.43 33.26 32.85 194.83 7.86 33.31 18.06 130.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 229.44 66.26 100.22 0.00 0.00 0.00 35 ER3j ExonRegion 0 9.87 77.28 68.99 26.20 22.31 155.32 3.67 18.24 17.06 86.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 217.20 45.87 68.83 0.00 0.70 0.00 36 E3_Df KnownBoundary 0 6.67 37.36 53.72 14.85 13.58 76.60 0.00 5.71 14.15 27.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 158.81 9.04 28.19 0.00 0.00 0.00 37 E3_Dg KnownBoundary 0 9.93 40.91 34.03 6.73 7.81 65.02 0.00 8.54 10.16 47.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 113.71 36.14 26.01 0.00 0.00 0.00 38 ER3k ExonRegion 0 14.82 87.44 75.36 24.19 29.43 144.87 1.32 15.99 22.23 90.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 287.33 63.71 61.70 0.00 2.08 0.00 39 ER3l ExonRegion 0 9.43 73.19 44.67 22.98 16.67 108.15 4.57 10.68 17.67 69.60 0.00 0.00 0.00 0.00 0.17 0.00 0.00 184.18 47.72 75.23 0.00 0.25 0.25 40 ER3m ExonRegion 0 7.21 67.03 59.91 33.77 14.37 99.70 4.61 18.82 30.56 79.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 167.60 38.11 90.23 0.00 0.00 0.00 41 ER3n ExonRegion 0 6.74 46.27 22.77 9.36 8.73 52.89 2.73 8.95 8.20 35.09 0.00 0.00 0.00 0.00 0.26 0.00 0.82 52.14 21.31 34.19 0.00 0.26 0.00