Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PFDN4 Gene 0 68.65 417.69 120.45 182.24 163.97 219.95 124.35 129.82 81.27 126.96 110.11 120.71 87.00 54.32 92.05 37.46 89.67 32.74 118.69 94.56 26.50 131.01 33.59 2 371419 Transcript 1 19.05 88.39 28.36 40.30 32.39 48.98 27.27 35.70 22.61 36.46 10.20 26.28 28.07 9.29 10.31 3.85 6.67 5.32 16.51 16.58 4.62 25.31 5.26 3 441080 Transcript 0 0.04 3.34 0.24 0.36 1.16 0.72 2.83 0.33 3.08 1.36 0.26 2.29 0.98 0.51 0.28 0.00 0.42 0.46 0.41 2.47 0.00 0.27 0.00 4 493356 Transcript 0 0.00 3.19 0.61 0.87 0.00 0.00 0.00 0.00 0.19 0.22 0.97 0.00 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.42 0.00 0.00 5 487129 Transcript 0 0.44 3.03 0.39 1.35 0.00 0.38 1.33 0.06 0.67 0.70 1.22 5.45 0.81 1.87 0.48 1.21 0.01 0.04 2.02 0.45 2.19 1.35 0.00 6 474326 Transcript 0 0.00 3.35 0.00 1.40 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.31 9.51 0.00 6.12 3.00 0.00 7 ER1a ExonRegion 0 15.32 24.49 3.21 3.17 10.45 22.37 9.42 3.90 2.37 2.98 10.20 0.00 0.79 1.95 4.51 2.84 8.92 6.74 8.28 6.36 7.09 3.33 4.88 8 E1a_E4a KnownJunction 1 1258.59 7001.52 339.70 653.30 2440.66 3594.80 2053.12 371.39 279.80 395.14 904.39 12.60 13.47 516.87 1229.75 435.70 827.21 278.48 1177.16 912.29 336.38 839.45 421.69 9 E1a_E5a NovelJunction 0 0.00 3.09 0.00 0.00 4.33 0.00 4.50 0.00 0.00 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 13.46 0.00 0.00 2.94 0.00 10 ER1b ExonRegion 1 463.74 2923.66 182.07 338.14 979.32 1622.79 865.92 205.45 154.99 226.26 419.84 0.00 2.10 242.22 506.32 204.46 395.77 166.74 461.44 420.03 152.28 326.03 177.41 11 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.38 0.44 1.93 0.00 0.00 0.12 0.00 0.00 0.00 0.00 0.00 0.00 0.85 0.00 0.00 12 ER2b ExonRegion 0 0.49 0.33 1.26 1.77 0.00 1.61 0.60 1.00 2.39 1.75 1.35 0.00 0.00 5.35 2.70 3.28 4.35 4.67 7.00 1.91 5.32 3.77 1.75 13 E2_Ac KnownBoundary 0 3.78 0.00 2.72 3.53 0.00 0.00 0.00 2.42 0.00 0.00 0.00 0.00 0.00 9.42 0.00 4.36 0.00 1.82 0.00 3.20 9.39 8.39 0.00 14 E2_Da KnownBoundary 0 0.00 3.35 1.63 3.83 0.00 0.00 2.08 2.18 0.00 4.41 10.48 0.00 0.00 2.47 0.00 4.10 0.00 5.14 0.00 8.95 5.62 0.00 8.02 15 E2a_E4a KnownJunction 0 0.00 6.38 1.21 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2c ExonRegion 0 2.12 6.97 3.68 4.19 0.19 0.52 1.32 1.23 0.18 3.60 5.94 0.00 0.00 6.38 0.41 2.97 0.71 3.96 0.00 7.90 11.02 5.66 3.78 17 ER2d ExonRegion 0 0.20 5.31 2.96 4.52 1.18 4.38 0.97 3.35 1.61 2.33 3.73 0.22 0.16 1.65 0.90 3.05 2.90 6.01 2.28 3.71 8.21 2.32 2.99 18 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2b_E4a KnownJunction 0 0.00 3.35 0.00 1.40 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.31 9.51 0.00 6.12 3.00 0.00 20 E3_Aa NovelBoundary 0 0.00 6.71 18.60 3.40 0.00 2.78 4.28 4.93 4.60 1.42 4.47 0.00 0.00 4.94 0.00 21.79 8.42 7.21 18.54 9.65 2.84 3.12 8.71 21 ER3a ExonRegion 0 1.33 5.72 1.16 4.04 0.00 1.15 1.93 0.17 0.40 2.11 3.67 16.36 2.43 5.61 1.43 3.63 0.04 0.11 6.06 1.34 6.58 4.04 0.00 22 E3a_E4a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 2.08 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER4a ExonRegion 1 493.32 3036.07 361.12 678.74 1108.29 1510.90 854.11 345.06 281.69 366.55 565.70 29.80 56.75 203.26 438.19 240.59 493.21 245.63 689.90 471.59 162.56 566.27 261.56 24 E4_Da KnownBoundary 1 55.86 144.38 251.71 325.33 228.01 204.83 148.25 187.34 155.18 145.83 58.65 85.83 137.17 16.54 137.22 24.27 35.44 56.58 71.53 56.76 15.94 52.42 10.67 25 ER4b ExonRegion 1 65.88 145.40 197.41 245.15 175.65 172.68 109.50 191.10 158.48 210.98 167.20 114.10 124.77 37.96 106.14 22.35 196.13 35.68 88.79 110.64 58.63 69.97 24.47 26 E4b_E5a KnownJunction 1 109.20 182.34 286.30 345.88 127.67 159.28 106.52 290.06 226.88 355.46 381.36 151.55 252.42 51.92 177.89 39.05 535.20 21.18 134.31 216.42 138.01 129.94 50.96 27 ER5a ExonRegion 0 88.95 352.50 450.88 673.87 440.19 404.78 184.61 398.84 299.04 393.43 571.25 398.07 250.27 254.92 484.45 202.32 523.91 174.45 576.14 472.79 125.94 520.53 186.51 28 E5a_E6a KnownJunction 0 161.88 705.60 441.82 490.21 2661.55 2624.28 1128.80 420.43 250.17 369.43 455.06 454.05 350.14 125.14 272.45 70.07 334.36 28.56 240.57 241.61 91.31 424.78 46.01 29 ER6a ExonRegion 0 182.10 2310.29 408.97 559.09 692.96 1118.46 670.74 426.75 247.33 406.18 387.11 523.15 362.13 161.07 265.34 83.95 290.53 55.36 309.96 237.64 71.58 414.80 49.48 30 E6_Da KnownBoundary 0 403.26 1810.73 372.19 538.16 424.53 256.33 228.37 461.51 234.55 436.40 349.35 408.58 229.69 186.47 182.58 54.86 185.41 41.70 225.04 234.96 65.36 445.90 28.00 31 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER6b ExonRegion 1 247.92 1004.10 339.01 515.52 283.63 224.20 157.48 454.76 204.03 416.07 251.28 568.50 367.76 143.71 165.22 42.28 97.38 40.36 226.93 179.42 33.93 376.29 31.95 33 E6_Db KnownBoundary 1 175.14 640.28 370.95 595.23 141.34 139.35 132.05 477.12 191.29 368.76 129.40 673.27 411.01 139.97 165.40 37.85 49.28 32.13 303.63 166.50 22.86 317.01 36.71 34 ER6c ExonRegion 1 244.54 479.92 353.77 585.04 177.32 233.45 118.28 451.59 189.45 395.84 104.80 466.00 267.96 101.76 141.67 71.69 48.91 45.00 259.80 150.91 13.22 370.92 52.64 35 E6_Dc KnownBoundary 1 115.06 372.57 304.01 445.86 176.74 244.75 159.82 343.95 161.54 331.91 74.55 230.78 160.87 84.41 45.49 22.81 26.74 21.27 85.84 143.49 6.12 271.26 19.89 36 ER6d ExonRegion 1 22.79 152.29 53.52 77.43 54.34 75.58 45.12 67.49 42.85 69.94 10.20 52.56 55.35 16.64 16.10 4.85 4.41 3.90 24.74 26.79 2.14 47.30 5.63 37 ER7a ExonRegion 0 0.17 3.01 0.03 1.40 1.91 0.08 1.87 0.02 1.47 0.60 0.05 0.06 0.00 0.00 0.08 0.00 0.00 1.85 0.00 0.03 0.00 0.00 0.00 38 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.44 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER8a ExonRegion 0 0.00 10.37 0.93 0.04 2.73 2.81 9.45 1.31 7.39 2.20 0.99 9.09 3.94 2.05 1.04 0.00 1.68 0.00 1.62 9.85 0.00 1.06 0.00