Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SALL4 Gene 0 1.12 3.30 5.52 10.23 11.12 7.69 3.13 10.51 22.39 8.69 0.02 0.00 0.10 0.00 0.00 0.00 0.12 81.71 4.05 5.68 18.50 2.07 7.95 2 371539 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.87 0.00 0.00 0.00 0.00 0.00 3 395997 Transcript 0 3.19 0.00 3.61 0.00 0.00 7.67 0.00 1.68 1.59 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.16 0.00 0.00 2.53 0.00 6.66 4 217086 Transcript 0 2.92 2.66 3.80 9.23 10.46 4.99 2.13 7.74 15.45 8.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70.19 1.61 3.21 15.39 1.56 5.89 5 483130 Transcript 0 0.00 0.00 0.00 0.35 0.47 0.16 0.75 0.89 1.31 0.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.10 1.25 0.37 4.47 0.17 0.51 6 481363 Transcript 0 0.15 1.70 5.42 5.00 18.03 9.06 0.44 6.43 18.43 4.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.43 0.71 4.96 6.80 0.71 8.96 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 0.00 0.00 0.00 8 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.84 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.24 1.03 0.00 0.63 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.53 0.60 1.06 0.57 0.54 0.00 10 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.19 4.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 4.24 2.81 0.00 0.00 0.00 11 E1a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.70 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.56 1.69 0.00 1.22 0.00 0.00 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 I2 Intron 0 0.15 0.55 0.59 1.95 2.23 2.31 1.14 1.68 5.99 1.09 0.00 0.00 0.00 0.00 0.00 0.08 0.00 21.41 2.62 2.20 7.55 0.68 4.12 15 I2_SR1 SilentIntronRegion 0 0.15 0.55 0.59 1.96 2.24 2.31 1.14 1.68 6.00 1.09 0.00 0.00 0.00 0.00 0.00 0.08 0.00 21.42 2.62 2.20 7.55 0.68 4.12 16 E3_Aa NovelBoundary 0 2.74 0.00 0.00 3.33 0.00 0.00 0.00 6.98 12.33 3.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38.01 0.00 0.00 8.96 2.27 4.10 17 ER3a ExonRegion 0 0.00 0.00 0.00 1.40 1.88 0.63 2.28 3.55 3.45 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.27 3.29 1.47 16.68 0.69 2.02 18 E3_Da NovelBoundary 0 0.00 0.00 0.00 1.43 22.33 5.00 2.12 0.00 11.55 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.77 0.00 0.00 14.21 3.12 3.16 19 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 20 I3 Intron 0 0.79 1.66 1.74 4.07 6.37 2.93 1.67 3.50 6.76 1.98 0.00 0.15 0.00 0.00 0.00 0.00 0.00 27.27 2.71 2.46 9.21 0.92 5.20 21 I3_SR1 SilentIntronRegion 0 0.31 1.67 0.70 2.84 5.79 2.92 1.60 2.86 6.31 1.32 0.00 0.21 0.00 0.00 0.00 0.00 0.00 18.44 1.38 2.46 8.08 1.01 4.11 22 I3_AR1 ActiveIntronRegion 0 2.33 1.12 5.03 8.30 9.28 3.54 2.19 5.95 9.36 4.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57.54 7.03 2.64 13.65 0.87 8.80 23 E4_Aa NovelBoundary 0 0.00 0.00 6.74 10.06 27.93 24.59 4.50 12.94 12.79 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47.17 13.84 3.26 2.35 0.00 11.69 24 ER4a ExonRegion 0 0.15 1.70 5.42 5.00 18.03 9.06 0.44 6.43 18.43 4.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.43 0.71 4.96 6.80 0.71 8.96 25 E4_Ab KnownBoundary 0 3.04 3.35 7.01 2.66 0.00 2.21 0.00 13.68 21.01 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63.63 4.61 0.00 8.09 0.00 14.77 26 ER4b ExonRegion 0 1.88 3.41 3.34 7.43 13.68 4.05 1.82 8.62 20.98 5.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78.71 2.57 3.68 17.99 0.65 8.39 27 E4_Da NovelBoundary 0 12.08 2.89 2.48 0.00 10.95 31.52 9.80 9.36 10.97 2.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.30 4.42 5.69 20.76 0.00 3.33 28 E4a_E5a KnownJunction 0 0.00 0.00 6.80 2.83 0.00 0.00 2.25 4.19 6.48 2.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72.96 4.42 6.14 0.00 0.00 13.06 29 E5_Aa NovelBoundary 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 2.46 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 14.70 3.12 7.94 30 ER5a ExonRegion 0 0.71 1.85 2.89 8.99 9.22 6.00 2.65 10.49 20.60 7.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 97.30 3.40 6.14 20.03 2.24 8.74 31 E5_Da KnownBoundary 0 0.00 0.00 6.86 1.27 7.64 2.90 2.08 6.61 24.22 8.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56.63 0.00 2.94 14.58 0.00 3.24 32 ER5b ExonRegion 0 3.16 4.40 5.52 12.46 10.14 5.87 2.01 14.68 26.87 9.26 0.00 0.00 2.32 0.00 0.00 0.00 0.00 121.49 3.37 11.04 30.23 1.05 10.71 33 E5_Db KnownBoundary 0 3.41 6.05 8.49 10.72 7.56 2.16 1.85 9.61 19.50 4.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 83.94 4.05 5.88 21.75 2.39 3.59 34 ER5c ExonRegion 0 1.29 1.65 4.71 6.37 10.41 7.16 2.80 12.48 23.70 7.34 0.15 0.00 0.30 0.00 0.00 0.00 0.52 93.02 2.56 7.93 19.91 2.78 7.94 35 E5_Dc KnownBoundary 0 0.00 0.00 8.90 12.72 15.11 12.38 4.37 6.41 15.83 14.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 150.72 0.00 8.56 21.99 8.21 10.59 36 E5c_E6a KnownJunction 0 3.19 0.00 3.61 0.00 0.00 7.67 0.00 1.68 1.59 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.16 0.00 0.00 2.53 0.00 6.66 37 ER5d ExonRegion 0 1.50 5.16 5.57 13.41 12.53 9.40 4.46 10.86 26.99 12.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 99.51 4.84 6.50 22.64 2.10 9.20 38 E5d_E6a KnownJunction 0 7.26 2.83 5.82 14.28 18.85 5.56 1.94 12.36 19.36 12.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 111.05 0.00 3.13 23.54 2.57 8.45 39 ER6a ExonRegion 0 0.60 1.44 8.38 12.10 16.27 10.02 1.85 11.59 28.65 13.44 0.00 0.00 0.00 0.00 0.00 0.00 0.60 110.12 9.60 5.07 19.10 3.13 11.39 40 E6a_E7a KnownJunction 0 0.00 2.63 6.89 7.42 22.24 26.06 4.06 9.61 23.35 12.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 103.51 17.60 3.26 16.56 0.00 20.49 41 ER7a ExonRegion 0 1.27 4.18 10.82 16.59 14.65 9.27 4.09 16.52 29.43 11.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 85.15 5.17 7.21 20.69 2.87 11.17 42 E7_Da KnownBoundary 0 2.89 0.00 14.61 16.78 11.80 9.54 1.63 29.74 25.72 9.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 83.45 0.00 3.26 16.49 3.06 0.00 43 ER7b ExonRegion 0 1.01 7.53 10.98 16.04 10.56 13.62 4.04 12.94 19.92 6.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.49 4.45 1.79 14.80 2.73 2.76 44 ER7c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 IG4_AR2 ActiveIntergenicRegion 0 6.92 9.71 5.26 14.65 34.08 17.00 8.11 12.54 15.92 6.62 0.00 0.00 0.00 0.00 0.11 0.00 0.00 26.13 4.85 3.29 9.65 3.63 6.44 46 IG4_SR2 SilentIntergenicRegion 0 14.57 16.39 12.25 31.83 39.51 16.07 6.46 13.93 25.14 6.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.74 1.69 3.63 22.81 0.00 6.91 47 IG4_AR1 ActiveIntergenicRegion 0 5.06 9.53 6.41 13.30 32.43 14.33 3.28 5.47 12.17 3.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.40 3.38 2.94 4.87 0.95 6.08