Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NFATC2 Gene 0 49.24 0.14 3.10 4.27 16.00 5.41 6.89 9.73 14.89 2.52 55.94 9.40 40.18 8.42 39.86 36.08 73.61 0.49 0.00 0.11 1.44 8.33 5.84 2 414705 Transcript 0 3.93 0.00 2.60 0.00 0.00 0.00 0.00 0.00 2.42 0.00 0.00 0.00 0.13 0.00 0.00 0.00 0.12 0.00 0.00 0.00 4.05 3.39 3.21 3 371567 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 4 396009 Transcript 0 3.78 0.00 0.00 0.00 0.00 0.00 2.25 0.00 6.63 0.00 19.22 0.00 35.06 4.94 6.06 25.29 33.01 0.00 0.00 0.00 0.00 2.57 7.34 5 371564 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 496054 Transcript 0 10.75 0.00 0.38 1.14 3.65 0.40 2.73 1.62 6.25 0.64 1.18 0.46 8.06 0.30 2.77 4.41 2.55 0.47 0.00 0.00 0.00 2.42 3.40 7 IG3_SR4 SilentIntergenicRegion 0 0.00 28.00 0.00 0.00 1.04 11.77 0.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.70 0.00 4.57 1.09 1.10 1.24 8 IG3_AR4 ActiveIntergenicRegion 0 0.00 53.55 0.00 0.00 2.68 22.01 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 8.87 1.47 0.00 2.94 9 IG3_SR3 SilentIntergenicRegion 0 3.76 70.42 19.90 35.50 12.08 40.17 9.30 28.45 72.47 12.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.16 9.04 26.83 2.93 2.31 5.93 10 IG3_AR3 ActiveIntergenicRegion 0 0.07 39.04 23.08 19.45 11.27 57.37 8.70 35.25 106.09 17.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47.10 13.52 27.17 3.55 3.58 4.79 11 IG3_SR2 SilentIntergenicRegion 0 0.67 56.71 17.91 16.64 20.75 52.05 10.17 34.69 103.54 16.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.35 2.99 21.98 4.23 0.98 9.02 12 IG3_AR2 ActiveIntergenicRegion 0 0.00 52.18 15.41 14.55 13.87 52.02 9.11 36.38 85.37 12.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.35 2.96 22.13 2.46 1.00 6.14 13 ER1a ExonRegion 0 1.12 0.00 1.54 0.00 0.00 0.00 0.00 0.00 2.10 0.00 0.00 0.00 0.27 0.00 0.00 0.00 0.24 0.00 0.00 0.00 3.21 3.66 6.42 14 E1a_E3a KnownJunction 0 6.74 0.00 3.67 0.00 0.00 0.00 0.00 0.00 2.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.88 3.12 0.00 15 I1 Intron 0 4.04 0.04 10.96 0.32 0.70 0.07 2.16 7.11 11.84 1.25 0.04 0.02 0.00 0.00 0.00 0.00 0.00 0.09 0.00 0.04 3.82 3.73 13.68 16 I1_SR1 SilentIntronRegion 0 2.31 0.00 3.97 0.35 1.20 0.00 1.68 3.96 8.16 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 3.65 1.34 10.46 17 I1_AR2 ActiveIntronRegion 0 4.15 0.00 10.62 0.00 0.35 0.00 4.20 9.56 19.96 1.34 0.00 0.68 0.00 0.00 0.00 0.00 0.00 0.71 0.00 0.51 9.23 1.81 13.79 18 I1_SR2 SilentIntronRegion 0 5.04 0.06 13.25 0.37 0.69 0.10 2.39 7.92 12.94 1.22 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.02 3.98 3.83 14.82 19 I1_AR3 ActiveIntronRegion 0 8.25 0.00 21.05 0.00 0.46 0.31 3.21 17.06 23.81 2.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.27 9.07 21.11 20 I1_SR3 SilentIntronRegion 0 1.91 0.00 11.91 0.24 0.00 0.07 1.61 6.58 9.62 1.34 0.30 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.00 0.00 1.65 6.39 13.73 21 ER2a ExonRegion 0 0.49 0.00 1.33 0.00 0.39 0.00 1.28 1.56 3.31 0.17 16.29 0.61 5.74 2.47 9.17 3.74 23.96 0.00 0.00 0.00 0.32 0.32 2.14 22 E2a_E3a KnownJunction 1 3.70 0.00 0.00 0.00 0.00 0.00 2.21 4.23 5.44 1.48 50.91 0.00 6.82 9.54 9.64 7.69 79.66 0.00 0.00 0.00 0.00 0.00 0.00 23 I2_AR2 ActiveIntronRegion 0 22.95 0.35 23.66 1.22 14.91 0.16 6.64 16.11 16.43 1.58 5.36 1.70 6.03 0.23 13.35 4.84 7.07 0.00 0.00 0.00 1.57 4.64 12.73 24 ER3a ExonRegion 0 8.95 0.00 8.63 0.80 1.73 2.80 2.79 11.51 16.57 1.72 58.23 7.60 31.16 9.77 37.91 31.80 98.96 0.50 0.00 0.00 3.16 5.40 8.27 25 E3_Da NovelBoundary 0 3.70 0.00 7.81 1.70 4.33 0.00 0.00 8.17 3.96 0.00 4.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 12.55 26 E3a_E4a KnownJunction 0 16.89 0.00 8.28 1.27 0.00 5.79 1.90 10.64 23.99 0.00 68.81 0.00 33.60 7.18 44.75 39.31 145.96 0.00 0.00 0.00 0.00 4.53 16.99 27 ER4a ExonRegion 0 14.08 0.00 4.32 2.16 6.30 1.43 6.58 14.76 22.80 1.29 73.97 7.70 36.84 9.66 47.09 37.89 105.03 0.82 0.00 0.00 3.31 12.05 8.35 28 E4a_E5a KnownJunction 0 17.04 0.00 5.29 2.06 0.00 5.34 0.00 6.24 23.21 1.67 79.81 0.00 80.19 14.30 35.48 38.71 112.86 0.00 0.00 0.00 0.00 7.96 7.60 29 ER5a ExonRegion 0 10.20 0.00 1.56 2.07 0.36 3.02 5.80 8.91 13.37 4.05 75.25 8.00 41.52 14.39 49.75 52.99 105.12 0.00 0.00 0.00 1.66 13.34 5.03 30 E5a_E6a KnownJunction 0 23.12 0.00 0.00 4.53 8.32 0.00 2.25 2.55 9.61 6.42 128.24 12.60 55.03 24.60 62.67 81.52 156.43 0.00 0.00 0.00 0.00 13.10 3.84 31 ER6a ExonRegion 0 32.40 0.00 1.34 4.20 12.54 7.57 12.47 15.09 17.32 5.95 134.24 24.78 96.51 20.70 65.35 67.47 171.99 0.50 0.00 0.00 5.57 17.10 7.15 32 E6a_E7a KnownJunction 0 12.52 0.00 2.99 7.89 18.42 2.90 16.83 5.59 25.35 6.90 128.24 12.30 101.45 20.13 67.74 67.16 170.55 2.49 0.00 0.00 5.19 25.60 16.99 33 ER7a ExonRegion 0 10.48 0.00 2.75 3.62 22.11 8.93 7.83 9.62 25.95 2.67 130.56 29.23 162.65 25.99 67.53 100.50 191.48 0.38 0.00 0.00 5.50 23.27 14.56 34 E7a_E8a KnownJunction 1 14.08 0.00 1.69 6.06 12.99 7.38 12.01 8.58 16.84 4.46 167.62 29.86 250.96 29.43 37.46 186.02 194.02 0.00 0.00 0.00 3.15 7.96 27.91 35 ER8a ExonRegion 0 14.14 0.00 4.29 4.62 4.68 7.70 8.04 10.53 23.89 4.57 175.24 27.29 205.94 18.27 45.02 113.63 251.28 0.00 0.00 0.00 6.34 12.35 15.63 36 E8_Da NovelBoundary 0 26.08 0.00 0.00 0.00 7.64 2.78 6.67 2.18 12.62 0.00 0.00 0.00 0.00 0.00 10.26 15.47 4.11 0.00 0.00 0.00 0.00 5.63 0.00 37 E8a_E9a KnownJunction 0 10.74 0.00 8.75 3.86 0.00 10.11 2.25 18.20 20.08 3.04 123.50 18.91 161.52 19.25 46.48 88.52 234.88 0.00 0.00 0.00 2.90 20.39 23.47 38 E9_Aa NovelBoundary 0 11.34 0.00 0.00 3.86 0.00 0.00 2.25 7.02 13.89 2.63 0.00 0.00 6.82 0.00 0.00 3.25 27.49 0.00 0.00 0.00 0.00 0.00 8.11 39 ER9a ExonRegion 0 28.68 0.00 4.93 4.45 16.45 8.45 10.45 16.84 28.13 4.01 186.65 31.81 188.78 22.30 69.13 128.60 252.14 1.85 0.00 0.00 3.42 22.43 17.60 40 E9a_E10a KnownJunction 1 28.97 0.00 2.57 2.06 7.47 16.41 4.42 16.59 26.39 5.59 115.77 35.41 231.97 17.36 41.91 101.77 172.70 0.00 0.00 0.00 3.15 13.90 3.24 41 ER10a ExonRegion 0 10.07 0.00 0.55 2.08 4.13 4.69 3.40 6.85 16.25 3.32 76.37 14.32 99.72 13.56 41.81 48.22 119.70 0.95 0.00 0.88 0.90 11.98 7.92 42 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E10a_E13b KnownJunction 0 0.00 0.00 0.00 3.53 7.13 7.78 4.37 4.07 14.26 1.18 76.91 7.20 47.24 16.95 23.98 51.44 122.02 0.00 0.00 3.20 0.00 20.45 19.63 44 E10a_E14a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 2.25 0.00 6.63 0.00 19.22 0.00 35.06 4.94 6.06 25.29 33.01 0.00 0.00 0.00 0.00 2.57 7.34 45 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.09 46 ER12a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 I12_AR2 ActiveIntronRegion 0 4.23 0.00 1.23 0.00 2.68 0.00 2.65 3.46 2.47 1.15 3.87 0.00 3.84 0.00 12.66 0.00 4.80 0.00 0.00 0.00 0.00 0.00 4.81 48 ER13a ExonRegion 0 10.75 0.00 0.38 1.14 3.65 0.40 2.73 1.62 6.25 0.64 1.18 0.46 8.06 0.30 2.77 4.41 2.55 0.47 0.00 0.00 0.00 2.42 3.40 49 E13_Ab KnownBoundary 0 3.11 0.00 0.00 1.93 0.00 0.00 1.85 0.00 6.63 1.67 0.00 5.85 0.00 0.00 0.00 3.25 4.39 2.45 0.00 0.00 0.00 0.00 0.00 50 ER13b ExonRegion 0 6.35 0.00 0.00 3.90 10.70 7.31 4.76 7.21 16.24 3.26 96.44 16.17 47.44 10.81 18.11 40.04 96.26 0.57 0.00 0.44 0.00 15.28 10.94 51 E13a_E14a KnownJunction 0 12.82 0.00 0.00 1.43 18.51 0.00 2.08 3.82 11.08 2.87 81.65 25.06 48.05 4.83 31.52 32.13 71.81 0.00 0.00 0.00 0.00 16.29 4.35 52 I13_SR2 SilentIntronRegion 0 10.58 0.00 0.00 0.00 1.34 2.75 0.66 0.00 1.84 0.00 3.87 0.00 3.59 0.67 3.50 7.43 1.65 0.00 0.00 0.00 0.00 0.00 0.00 53 ER14a ExonRegion 0 10.04 0.00 0.00 3.74 14.75 10.75 7.64 8.24 20.19 2.61 110.94 18.43 76.02 11.56 38.39 67.32 109.08 0.00 0.00 0.00 0.00 19.19 19.26 54 E14_Da KnownBoundary 0 14.22 0.00 0.00 8.69 19.19 25.50 9.72 14.62 25.84 2.71 124.29 13.20 74.83 14.48 61.69 62.97 126.32 0.00 0.00 0.00 0.00 13.90 26.12 55 ER14b ExonRegion 0 20.21 0.00 1.08 7.30 16.02 8.60 9.55 17.91 28.64 2.74 97.42 15.07 116.76 18.82 52.41 55.81 120.51 1.11 0.00 0.00 0.40 19.98 11.96 56 E14_Db KnownBoundary 0 9.56 0.00 3.34 7.46 44.65 9.99 4.33 18.85 31.39 0.00 81.18 25.81 101.62 16.78 29.17 35.38 138.76 2.57 0.00 0.00 3.03 12.25 10.41 57 ER14c ExonRegion 0 83.76 0.27 2.90 6.37 25.81 7.03 9.17 10.74 14.68 2.80 47.21 8.51 23.68 6.42 44.10 33.10 53.10 0.42 0.00 0.05 0.93 7.49 4.17 58 IG2_AR5 ActiveIntergenicRegion 0 0.00 0.00 0.00 3.44 0.00 0.00 0.14 0.61 0.44 0.83 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 0.00 0.00 0.53 9.57 7.45 59 IG2_AR1 ActiveIntergenicRegion 0 1.79 0.95 18.47 140.54 22.91 25.05 3.22 13.28 49.05 121.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62.57 17.11 13.87 0.00 0.00 0.00 60 IG2_SR1 SilentIntergenicRegion 0 3.79 3.31 7.70 94.03 16.54 10.34 1.77 5.41 27.36 64.30 0.05 0.08 0.00 0.02 0.00 0.00 0.00 26.35 8.61 5.24 0.00 0.00 0.00