Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CASS4 Gene 0 8.49 2.04 0.74 3.32 6.37 2.62 4.29 3.19 5.57 1.86 0.71 1.71 1.52 1.33 2.76 1.62 1.13 0.37 1.25 1.21 2.54 2.06 1.00 2 360314 Transcript 0 0.55 1.51 0.45 3.88 0.00 1.37 0.98 0.00 0.00 1.69 0.00 0.00 0.00 1.01 0.51 0.00 0.00 0.00 0.79 1.58 0.55 1.68 0.00 3 371336 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 340974 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 434344 Transcript 0 20.02 12.75 0.83 6.94 17.67 4.90 12.35 6.92 12.03 3.71 2.64 10.09 12.38 7.70 16.88 5.41 5.26 2.10 6.89 7.51 4.48 6.52 4.68 6 497244 Transcript 0 1.27 0.00 0.24 0.41 0.89 0.12 2.06 0.51 1.95 0.00 0.00 1.19 0.00 0.55 1.09 0.59 0.22 0.00 0.00 0.00 0.00 0.14 0.00 7 414403 Transcript 0 0.76 0.00 0.00 1.04 0.57 0.00 2.29 0.12 0.26 0.00 0.00 0.00 0.00 0.00 0.21 0.00 0.00 0.00 0.00 0.00 0.31 0.00 0.21 8 IG34 Intergenic 0 9.53 25.11 6.62 17.29 13.87 5.38 11.94 7.22 5.66 10.77 2.26 5.15 5.60 3.20 5.48 3.25 2.72 4.72 7.78 6.30 1.87 3.89 3.10 9 IG34_SR1 SilentIntergenicRegion 0 12.25 30.83 9.14 19.69 17.15 10.61 17.17 12.88 12.09 17.91 6.35 18.17 15.67 13.59 15.26 13.95 7.75 12.53 13.45 14.30 7.24 15.31 16.08 10 IG34_AR1 ActiveIntergenicRegion 0 43.64 115.24 23.24 67.72 44.24 20.44 32.10 27.04 19.67 37.63 10.06 17.41 12.28 10.37 18.07 8.01 7.97 11.11 18.35 21.75 2.46 15.67 7.91 11 IG34_AR2 ActiveIntergenicRegion 0 25.31 87.99 19.27 35.00 16.94 3.22 12.58 8.15 6.47 14.43 4.08 5.02 6.79 2.76 7.62 7.32 0.00 2.59 5.60 9.73 0.78 7.33 4.13 12 ER1a ExonRegion 0 1.11 3.02 0.90 6.23 0.00 0.23 1.97 0.00 0.00 3.37 0.00 0.00 0.00 2.02 1.01 0.00 0.00 0.00 1.58 3.16 1.09 0.00 0.00 13 E1_Da NovelBoundary 0 13.71 6.18 5.88 10.99 8.66 2.78 6.18 2.26 4.11 4.49 0.00 5.85 6.66 0.00 0.00 0.00 4.77 4.85 3.95 2.88 0.00 0.00 0.00 14 E1a_E2d KnownJunction 0 0.00 0.00 0.00 1.53 0.00 2.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.37 0.00 15 E2_Ab NovelBoundary 0 9.71 0.00 0.00 0.00 20.80 0.00 6.05 2.55 0.00 6.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.98 9.04 0.00 2.41 0.00 0.00 16 ER2a ExonRegion 0 1.06 0.00 0.00 0.34 0.00 0.00 0.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.04 0.00 17 ER2b ExonRegion 0 43.14 3.03 4.15 7.19 8.65 3.43 14.17 1.03 3.73 1.46 1.60 0.00 0.00 1.04 0.31 0.00 0.14 0.00 2.51 2.76 1.59 3.19 2.25 18 E2_Ac KnownBoundary 0 143.36 5.72 1.74 15.25 29.46 5.68 27.91 4.52 9.43 3.22 2.68 0.00 0.00 3.00 5.81 0.00 0.00 2.28 8.85 6.39 3.03 3.12 7.85 19 E2_Ad KnownBoundary 0 51.27 19.08 17.00 11.85 4.33 13.34 15.28 14.91 12.12 1.24 5.11 0.00 0.00 2.12 0.00 0.00 4.77 0.00 4.80 6.07 0.00 0.00 0.00 20 ER2c ExonRegion 0 93.86 10.24 12.97 14.24 16.88 10.75 23.01 9.42 9.92 3.36 4.93 0.00 0.00 2.74 2.90 0.20 3.30 0.00 9.56 5.58 1.29 2.01 5.77 21 ER2d ExonRegion 0 10.93 5.13 5.83 7.86 5.35 2.79 7.24 6.63 10.30 4.50 1.75 2.32 0.00 1.49 4.23 0.93 0.42 0.89 4.73 2.29 3.86 1.35 1.76 22 E2_Da NovelBoundary 0 3.78 3.35 15.88 11.89 4.33 0.00 7.02 7.43 9.49 8.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 9.40 0.00 0.00 0.00 23 E2a_E3b KnownJunction 0 0.00 0.00 0.00 1.96 11.80 0.00 4.15 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.09 0.00 4.10 24 I2_AR1 ActiveIntronRegion 0 30.02 7.16 5.73 16.64 8.78 1.49 11.55 5.80 10.90 4.99 0.00 1.42 0.56 2.82 4.29 0.79 1.15 3.29 6.91 1.85 0.29 1.11 0.63 25 ER3a ExonRegion 0 1.51 0.00 0.00 0.58 1.15 0.00 0.57 0.25 0.53 0.00 0.00 0.00 0.00 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.63 0.00 0.42 26 ER3b ExonRegion 0 3.34 0.74 0.68 2.25 4.31 2.54 3.11 2.33 2.29 0.67 0.38 0.00 0.00 0.58 1.64 2.25 0.86 0.00 0.00 0.00 2.54 1.53 0.18 27 E3_Da KnownBoundary 0 16.82 0.00 1.15 1.37 0.00 0.00 0.00 0.00 5.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.49 0.00 0.00 0.00 11.43 2.57 0.00 28 E3a_E4a KnownJunction 0 0.00 0.00 0.00 1.50 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER3c ExonRegion 0 5.91 0.09 0.06 1.36 1.54 2.30 0.16 2.43 1.37 0.00 0.61 0.00 0.00 0.50 0.00 0.13 2.77 0.00 0.00 0.00 2.43 0.82 0.00 30 E3b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 7.56 0.00 2.25 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 31 ER4a ExonRegion 0 1.06 1.02 0.00 4.70 5.59 2.71 1.31 0.39 1.83 0.00 0.00 0.00 0.00 1.46 0.00 0.00 0.00 0.00 0.00 0.00 3.50 0.00 0.46 32 E4a_E5a KnownJunction 0 0.00 0.00 0.00 5.66 0.00 0.00 0.00 4.35 4.77 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.01 33 ER5a ExonRegion 0 9.54 0.00 0.00 2.51 3.20 2.35 1.67 2.41 3.45 2.95 1.22 0.00 0.00 0.70 1.29 0.00 0.00 0.00 0.00 0.00 2.31 2.62 1.27 34 E5a_E6a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 4.88 0.00 1.93 1.68 1.21 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 5.93 0.00 0.00 35 E5a_E7a KnownJunction 0 0.00 0.00 0.00 1.43 0.00 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER6a ExonRegion 0 7.87 0.40 0.43 3.31 8.76 2.76 4.13 3.85 6.28 2.46 0.38 0.64 0.30 0.23 0.70 1.62 0.90 0.32 0.25 0.33 3.67 2.27 0.91 37 E6_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 E6a_E7a KnownJunction 0 10.08 0.00 0.00 3.40 8.40 2.84 2.25 3.94 4.63 2.90 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 39 ER6b ExonRegion 0 1.27 0.00 0.24 0.41 0.89 0.12 2.06 0.51 1.95 0.00 0.00 1.19 0.00 0.55 1.09 0.59 0.22 0.00 0.00 0.00 0.00 0.14 0.00 40 ER7a ExonRegion 0 8.02 0.24 0.12 2.40 3.06 4.22 1.91 2.77 6.64 1.12 0.67 0.58 0.45 0.15 0.78 1.55 0.00 0.00 0.74 0.25 1.90 1.93 0.00 41 E7_Da KnownBoundary 0 21.78 0.00 1.83 4.06 0.00 2.78 0.00 2.55 7.96 2.93 0.00 0.00 0.00 0.00 4.45 7.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER7b ExonRegion 0 10.14 0.00 0.36 3.82 2.46 3.29 1.26 4.55 9.22 4.37 0.89 0.00 0.00 1.17 0.52 0.67 0.00 0.00 0.00 0.00 1.13 2.40 0.00 43 E7_Db KnownBoundary 0 13.34 0.00 0.00 6.83 0.00 2.73 0.00 4.27 11.86 7.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 3.12 0.00 44 ER7c ExonRegion 0 20.02 12.75 0.83 6.94 17.67 4.90 12.35 6.92 12.03 3.71 2.64 10.09 12.38 7.70 16.88 5.41 5.26 2.10 6.89 7.51 4.48 6.52 4.68