Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KCNG1 Gene 0 6.57 0.86 38.69 195.61 9.83 27.77 7.51 3.29 34.66 110.68 0.00 0.00 0.11 0.09 0.00 0.00 0.00 129.25 11.01 6.75 9.65 14.52 24.93 2 371571 Transcript 0 4.37 0.47 36.34 214.83 7.41 29.41 5.11 2.38 38.87 121.08 0.00 0.00 0.09 0.04 0.00 0.00 0.00 161.40 15.14 8.53 9.60 17.30 30.82 3 439216 Transcript 0 0.00 0.00 15.49 71.92 0.00 0.00 0.00 1.60 11.98 61.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67.07 12.80 0.00 5.37 8.82 12.04 4 424171 Transcript 0 0.00 0.00 15.82 34.99 0.00 0.00 0.00 0.00 5.67 46.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47.71 0.00 5.69 0.00 2.57 7.34 5 433903 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 396017 Transcript 0 4.16 0.35 4.59 88.07 7.95 5.72 4.48 1.04 9.51 27.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.50 4.96 1.35 2.14 4.09 10.80 7 447736 Transcript 0 10.06 0.39 2.77 70.24 6.92 6.08 7.43 0.00 7.56 21.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.87 5.81 1.69 0.28 3.24 9.13 8 ER1a ExonRegion 0 0.00 0.00 0.27 0.77 2.68 9.73 0.58 0.30 0.27 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.32 2.77 0.00 0.00 0.00 7.53 9 E1_Ac KnownBoundary 0 0.00 0.00 1.48 3.93 3.99 22.09 1.90 0.00 0.00 5.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.87 8.75 0.00 0.00 0.00 16.13 10 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ae KnownBoundary 0 0.00 0.00 10.41 2.96 0.00 4.71 0.00 2.51 3.88 11.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.00 0.00 0.00 2.78 2.57 0.00 12 ER1b ExonRegion 0 0.00 0.00 3.30 1.36 4.53 20.31 2.65 1.73 2.38 4.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.27 3.19 0.00 0.17 1.28 8.81 13 ER1c ExonRegion 0 0.81 0.00 3.68 2.20 7.82 24.40 3.16 1.73 3.33 11.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.06 4.17 0.65 2.20 3.85 9.94 14 ER1d ExonRegion 0 2.12 0.00 3.68 4.09 8.03 25.67 3.97 1.73 3.71 16.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.02 6.37 2.13 2.20 4.17 11.75 15 ER1e ExonRegion 0 1.48 0.49 9.46 32.01 2.05 5.30 3.44 1.00 8.49 47.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38.65 7.30 3.66 4.33 6.58 8.66 16 E1_Da KnownBoundary 0 0.00 0.00 6.36 16.22 7.98 0.00 2.25 0.00 1.59 20.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.16 0.00 3.26 0.00 3.12 4.35 17 E1a_E2b KnownJunction 0 0.00 0.00 15.82 34.99 0.00 0.00 0.00 0.00 5.67 46.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47.71 0.00 5.69 0.00 2.57 7.34 18 E1a_E3a KnownJunction 0 0.00 0.00 15.49 71.92 0.00 0.00 0.00 1.60 11.98 61.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67.07 12.80 0.00 5.37 8.82 12.04 19 E1a_E4a KnownJunction 0 0.00 0.00 7.13 70.59 0.00 2.33 4.24 0.00 18.40 33.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 104.38 9.22 3.26 2.53 12.12 25.61 20 ER1f ExonRegion 0 0.50 0.00 4.49 11.89 1.39 3.13 0.78 0.00 2.33 13.66 0.00 0.00 0.00 0.32 0.00 0.00 0.00 21.21 3.08 0.76 3.13 0.72 1.71 21 E1b_E3a KnownJunction 0 0.00 0.00 0.00 13.72 0.00 0.00 0.00 0.00 1.79 7.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.31 0.00 0.00 0.00 0.00 0.00 22 I1 Intron 0 3.44 0.21 2.84 20.74 3.62 6.02 3.56 0.47 7.07 16.35 0.00 0.00 0.00 0.04 0.00 0.03 0.00 33.48 4.60 2.47 1.27 3.48 8.85 23 I1_SR1 SilentIntronRegion 0 3.45 0.21 2.84 20.74 3.63 6.03 3.56 0.47 7.07 16.35 0.00 0.00 0.00 0.04 0.00 0.03 0.00 33.49 4.61 2.47 1.27 3.48 8.85 24 E2_Aa NovelBoundary 0 0.00 0.00 3.52 74.52 4.07 6.59 1.85 0.00 9.95 19.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71.18 4.33 6.01 0.00 2.94 7.85 25 ER2a ExonRegion 0 10.06 0.39 2.77 70.24 6.92 6.08 7.43 0.00 7.56 21.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.87 5.81 1.69 0.28 3.24 9.13 26 E2_Ab KnownBoundary 0 9.41 0.00 9.61 150.70 14.52 5.51 13.60 0.00 18.52 26.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.29 16.66 0.00 3.03 10.35 10.67 27 ER2b ExonRegion 0 6.85 0.00 34.17 142.14 16.73 8.69 8.43 2.28 25.06 81.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 111.68 20.77 5.42 8.03 11.25 21.14 28 E2_Da NovelBoundary 0 0.00 0.00 3.13 110.08 6.37 2.90 4.50 0.00 19.97 19.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.84 4.24 3.00 2.78 8.21 12.29 29 E2a_E3a KnownJunction 0 0.00 0.00 46.27 102.02 4.33 7.84 6.09 0.00 14.81 68.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58.24 3.76 0.00 5.44 0.00 4.35 30 E2a_E4a NovelJunction 0 0.00 0.00 13.63 8.36 0.00 8.29 0.00 0.00 3.94 5.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.55 0.00 3.26 2.72 0.00 0.00 31 I2_AR1 ActiveIntronRegion 0 3.74 0.53 1.39 66.46 5.19 4.75 4.61 0.00 13.15 18.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.54 8.09 3.52 1.04 5.61 11.28 32 E3_Aa NovelBoundary 0 11.34 0.00 4.64 65.99 21.65 5.62 5.83 0.00 5.03 25.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.11 0.00 0.00 0.00 5.51 16.39 33 ER3a ExonRegion 0 3.10 1.44 60.70 203.59 9.04 25.93 8.13 1.46 42.76 150.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 165.53 13.35 5.43 16.98 4.31 32.56 34 E3a_E4a KnownJunction 0 13.93 2.70 58.04 266.67 23.51 56.50 11.48 2.38 47.92 185.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 212.78 14.21 8.88 19.58 11.51 33.21 35 E4_Aa NovelBoundary 0 7.04 0.00 3.37 50.68 4.33 4.94 0.00 0.00 4.48 9.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.13 0.00 0.00 0.00 0.00 19.97 36 ER4a ExonRegion 0 9.94 0.12 67.42 268.68 15.72 64.74 13.76 7.53 59.18 193.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 271.36 20.41 9.99 16.07 30.66 42.51 37 E4_Da KnownBoundary 0 3.26 0.00 45.89 232.84 8.66 40.66 10.02 5.01 46.82 187.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 175.68 9.41 11.25 10.56 22.23 43.11 38 ER4b ExonRegion 0 5.73 0.71 70.05 263.12 10.02 37.83 8.14 5.68 51.64 205.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 255.53 12.44 8.98 19.26 27.09 29.19 39 E4_Db KnownBoundary 0 16.08 0.00 81.43 337.39 30.73 48.89 15.63 4.31 70.31 262.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 368.60 3.86 11.57 17.17 21.98 26.55 40 ER4c ExonRegion 0 7.80 0.82 45.44 177.60 10.50 40.77 10.75 1.29 36.27 128.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 162.22 7.72 7.97 9.63 20.38 21.36 41 E4_Dc KnownBoundary 0 9.78 0.00 23.24 162.28 15.53 55.48 18.33 3.74 24.42 37.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 157.07 0.00 2.94 0.00 2.69 4.35 42 ER4d ExonRegion 0 3.47 0.45 33.53 189.45 7.32 26.66 7.24 3.05 34.00 112.18 0.00 0.00 0.00 0.29 0.00 0.00 0.00 124.11 13.81 8.72 4.64 17.49 19.97 43 E4_Dd KnownBoundary 0 0.00 0.00 5.44 68.36 4.07 0.00 2.16 0.00 9.26 20.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58.70 3.95 0.00 2.53 0.00 12.80 44 E4d_E5a KnownJunction 0 7.41 0.00 60.82 417.46 12.99 54.06 5.30 2.55 69.76 247.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 318.69 31.72 18.09 17.05 32.39 44.05 45 ER4e ExonRegion 0 4.16 0.35 4.59 88.07 7.95 5.72 4.48 1.04 9.51 27.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.50 4.96 1.35 2.14 4.09 10.80 46 E4_De NovelBoundary 0 3.56 0.00 6.74 69.02 7.47 2.90 14.22 2.46 9.43 42.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 4.71 0.00 0.00 6.25 7.77 47 Ix Intron 0 4.32 0.13 4.47 64.59 8.81 4.37 5.40 0.24 6.41 21.71 0.00 0.00 0.29 0.00 0.00 0.00 0.00 12.31 2.10 0.73 0.76 2.74 5.16 48 Ix_AR2 ActiveIntronRegion 0 7.00 0.00 5.42 118.91 15.98 6.13 3.66 1.51 8.65 27.35 0.00 0.00 1.00 0.00 0.00 0.00 0.00 11.24 2.20 0.45 3.41 3.54 3.74 49 Ix_SR2 SilentIntronRegion 0 6.56 0.00 5.04 74.11 10.18 5.95 8.09 0.07 6.63 27.97 0.00 0.00 0.51 0.00 0.00 0.00 0.00 16.20 4.42 0.88 0.54 3.13 6.51 50 Ix_AR1 ActiveIntronRegion 0 5.22 0.56 7.87 98.33 12.47 5.80 8.34 0.00 9.01 32.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.54 2.62 1.88 0.28 3.56 8.59 51 ER5a ExonRegion 0 10.06 1.89 77.15 370.51 13.98 51.53 10.33 6.67 67.03 202.16 0.00 0.00 0.34 0.18 0.00 0.00 0.00 222.20 16.84 12.79 18.80 24.70 46.09