Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-425M5.2 Gene 0 15.83 3.84 4.75 6.48 12.88 3.70 6.72 8.88 8.62 4.00 5.28 2.78 4.41 3.98 5.17 5.80 3.65 2.15 2.90 1.94 2.72 1.63 0.96 2 411780 Transcript 0 4.75 0.57 1.42 2.28 4.42 1.33 3.26 1.82 2.29 0.67 2.76 0.00 2.40 2.73 2.16 3.50 1.01 2.08 2.97 1.39 2.05 1.35 0.00 3 447625 Transcript 0 2.18 0.00 0.00 2.86 5.77 0.67 3.62 2.90 0.85 3.97 2.61 1.46 0.00 2.13 0.00 4.35 1.49 2.55 1.57 0.18 1.61 0.03 1.16 4 ER1a ExonRegion 0 4.22 0.81 0.73 2.43 3.20 2.19 5.28 0.00 1.47 0.62 1.54 0.00 1.54 3.02 2.92 7.11 1.32 5.49 6.35 2.49 5.22 0.63 0.00 5 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.27 0.00 6 Ix Intron 0 26.16 9.52 9.69 10.68 22.30 7.62 17.68 8.80 12.29 11.82 13.40 13.49 23.11 15.36 12.81 20.65 12.61 15.98 9.80 11.73 21.05 7.72 9.73 7 Ix_AR1 ActiveIntronRegion 0 30.82 9.60 11.87 12.78 24.42 3.98 21.46 12.78 18.52 15.70 13.43 15.99 43.40 16.83 22.55 27.50 20.79 26.75 13.82 23.90 30.81 9.83 17.10 8 Ix_SR1 SilentIntronRegion 0 25.47 9.52 9.37 10.37 21.99 8.17 17.12 8.20 11.36 11.24 13.40 13.11 20.07 15.14 11.35 19.63 11.38 14.37 9.20 9.90 19.58 7.40 8.63 9 I1 Intron 0 13.39 4.49 2.61 4.10 9.08 3.11 7.17 4.02 5.40 3.68 4.22 4.78 6.92 4.07 4.78 6.24 3.11 2.35 2.91 2.01 3.68 1.74 3.16 10 I1_SR1 SilentIntronRegion 0 20.18 13.49 9.09 7.58 17.20 4.93 8.50 11.75 10.30 5.67 14.83 11.62 6.41 12.26 16.31 17.87 10.95 15.04 3.30 3.97 19.18 8.21 7.31 11 I1_AR1 ActiveIntronRegion 0 12.88 5.70 1.94 5.49 6.98 2.66 7.80 2.24 3.02 3.13 2.99 4.11 10.95 2.73 2.42 3.73 2.87 0.44 2.46 2.67 1.49 1.41 4.54 12 I1_AR2 ActiveIntronRegion 0 22.74 3.91 2.34 2.93 12.02 6.18 7.64 4.13 11.22 5.49 2.79 3.39 2.30 4.04 3.91 6.67 1.59 0.59 6.64 2.05 1.77 0.33 1.88 13 E2_Aa NovelBoundary 0 11.04 0.00 4.55 7.09 15.45 10.56 6.76 9.94 13.74 2.95 4.32 17.26 6.66 7.42 4.45 7.60 0.00 0.00 0.00 0.00 3.15 2.39 4.27 14 ER2a ExonRegion 0 2.18 0.00 0.00 2.86 5.77 0.67 3.62 2.90 0.85 3.97 2.61 1.46 0.00 2.13 0.00 4.35 1.49 2.55 1.57 0.18 1.61 0.03 1.16 15 E2_Ab KnownBoundary 0 3.78 0.00 0.00 7.92 7.56 2.84 4.33 6.65 2.92 7.01 4.63 17.11 0.00 7.42 0.00 8.72 4.77 4.89 4.52 0.00 0.00 0.00 4.35 16 ER2b ExonRegion 0 2.65 0.00 1.74 4.34 6.38 2.18 4.01 5.31 8.00 4.97 2.98 9.23 3.68 3.45 2.11 6.17 3.73 0.97 0.51 0.95 0.04 2.01 0.63 17 E2_Da NovelBoundary 0 10.45 0.00 1.83 1.50 0.00 2.67 6.27 8.34 6.94 4.59 2.21 0.00 13.47 0.00 0.00 11.19 4.77 1.99 0.00 0.00 0.00 0.00 8.54 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 1.89 7.78 0.00 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 2.51 0.00 19 I2_AR2 ActiveIntronRegion 0 20.89 6.69 1.00 2.60 6.85 6.37 5.08 4.71 8.75 2.81 2.47 1.30 2.82 3.21 4.27 2.17 2.41 1.34 1.16 1.17 2.42 1.90 2.15 20 E3_Aa NovelBoundary 0 20.89 16.25 6.27 9.06 23.26 2.61 17.36 17.00 6.66 2.42 2.32 0.00 6.82 2.24 0.00 12.39 0.00 0.00 4.71 5.43 0.00 3.12 0.00 21 ER3a ExonRegion 0 25.99 6.85 7.76 9.19 19.17 5.35 8.72 14.06 12.79 5.19 7.26 2.62 6.05 4.92 7.78 5.91 5.01 1.57 2.73 2.36 3.10 2.18 1.44 22 E3_Da KnownBoundary 0 7.33 3.35 6.98 11.52 29.71 5.05 4.50 10.72 15.54 6.98 12.74 0.00 0.00 7.06 14.09 4.36 4.77 4.10 0.00 0.00 3.15 2.94 0.00 23 ER3b ExonRegion 0 10.04 0.89 3.52 4.42 10.06 1.80 4.51 5.46 5.40 1.39 6.73 0.00 5.67 2.70 3.56 3.40 1.70 0.75 2.57 1.68 0.92 1.14 0.00 24 IG50_AR14 ActiveIntergenicRegion 0 9.71 1.74 2.24 3.14 13.44 0.00 8.15 6.11 6.60 6.78 5.45 14.84 2.06 8.99 4.63 4.02 5.27 13.34 6.72 4.31 21.02 4.65 4.87