Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP3-410C9.2 Gene 0 0.44 1.09 10.96 0.84 3.19 2.87 8.71 0.96 0.68 0.42 4.61 0.88 0.16 3.06 10.31 1.34 2.85 0.46 7.20 4.11 3.53 0.09 2.78 2 427348 Transcript 0 2.43 2.80 1.66 0.00 1.84 1.26 9.12 0.58 1.25 0.39 25.31 3.28 0.89 17.08 57.59 7.50 15.92 1.27 40.23 13.69 19.74 0.48 15.52 3 432499 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 4.86 5.61 3.32 0.00 3.69 2.53 18.25 1.17 2.50 0.77 50.62 6.55 1.77 34.15 115.19 14.99 31.85 2.55 80.47 27.37 39.49 0.96 31.03 5 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 I2 Intron 0 3.87 10.58 78.70 3.51 6.28 4.14 22.06 44.47 26.68 48.59 74.57 22.17 14.09 25.21 82.88 45.11 59.02 14.30 257.43 65.38 58.89 3.44 85.91 8 I2_SR1 SilentIntronRegion 0 8.78 13.48 36.98 2.51 6.46 2.65 9.85 9.58 8.38 13.23 49.95 19.87 14.34 19.15 62.78 22.10 30.02 6.66 192.49 50.62 47.45 3.01 44.93 9 I2_AR1 ActiveIntronRegion 0 0.00 0.00 14.70 0.00 10.70 0.00 0.00 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 I2_SR2 SilentIntronRegion 0 0.00 1.56 25.39 1.18 4.64 0.18 2.09 5.72 2.98 7.96 10.23 0.00 1.38 1.02 1.81 4.16 3.69 0.50 22.90 6.12 6.06 0.03 6.24 11 I2_AR2 ActiveIntronRegion 0 0.57 14.08 176.19 6.73 7.22 9.26 53.99 121.09 69.56 127.38 158.46 42.88 23.97 52.47 173.91 107.96 141.14 35.27 530.29 132.18 116.25 6.72 203.16 12 I2 Intron 0 0.06 0.54 15.89 0.12 11.25 0.43 5.96 0.49 0.05 0.78 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.09 0.00 0.03 0.00 13 I2_SR1 SilentIntronRegion 0 0.06 0.56 16.21 0.13 11.05 0.44 6.04 0.54 0.06 0.80 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.03 0.00 14 E3_Aa NovelBoundary 0 0.00 0.00 34.33 0.00 3.23 0.00 8.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 0.00 0.00 15 ER3a ExonRegion 0 0.00 0.00 3.63 0.82 3.67 0.15 4.48 0.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E3_Da NovelBoundary 0 0.00 0.00 50.03 0.00 4.07 0.00 4.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E3a_E4a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 I3 Intron 0 0.27 2.02 47.64 0.58 11.79 0.29 10.33 0.48 0.05 1.89 0.00 0.10 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.60 0.00 0.00 0.00 19 I3_SR1 SilentIntronRegion 0 0.27 2.02 47.65 0.58 11.79 0.29 10.33 0.48 0.05 1.89 0.00 0.10 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.60 0.00 0.00 0.00 20 E4_Aa NovelBoundary 0 0.00 13.02 16.47 8.22 7.98 5.68 5.96 0.00 6.89 1.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.40 0.00 0.00 0.00 21 ER4a ExonRegion 0 0.00 7.20 2.87 5.57 1.36 10.36 2.03 1.11 5.63 0.00 0.99 0.00 0.00 0.00 0.00 0.00 0.00 2.83 0.00 17.34 0.00 0.00 0.00 22 E4_Da NovelBoundary 0 0.00 11.97 28.15 22.71 16.13 19.14 18.46 1.93 16.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.90 8.09 14.96 0.00 0.00 0.00 23 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E5_Aa NovelBoundary 0 0.00 6.31 13.28 1.86 0.00 2.61 17.22 0.00 9.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.33 12.02 0.00 0.00 0.00 25 ER5a ExonRegion 0 0.00 0.06 0.91 1.86 2.53 6.76 3.10 0.86 0.00 0.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 26 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER6a ExonRegion 0 0.00 0.00 15.34 0.27 3.50 1.83 9.65 1.02 0.00 0.43 0.00 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 0.00 0.00 0.00