Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MMP24 Gene 0 9.74 82.77 165.67 107.43 35.26 295.18 62.58 110.88 148.74 165.16 1.97 1.56 1.67 2.88 3.45 3.40 1.68 306.31 105.02 134.53 6.39 2.87 5.53 2 246186 Transcript 0 7.98 81.18 137.26 80.70 37.39 297.33 63.30 108.94 149.60 175.19 1.11 1.06 1.02 2.78 2.92 2.97 1.27 324.26 140.39 168.17 4.75 2.77 4.27 3 ER1a ExonRegion 0 0.32 3.24 5.73 1.68 0.40 8.95 1.83 3.00 5.60 7.38 0.03 0.00 0.00 0.00 0.00 0.00 0.00 6.02 7.09 7.49 0.00 0.00 0.00 4 E1a_E2a KnownJunction 0 7.56 60.19 62.09 27.37 15.53 101.87 26.01 39.35 57.44 75.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 203.16 65.13 96.45 0.00 0.00 0.00 5 E2_Aa NovelBoundary 0 20.15 5.92 8.22 15.12 21.14 4.88 12.10 11.17 15.25 7.66 0.00 0.00 13.64 0.00 0.00 7.78 0.00 12.56 14.21 8.50 11.06 0.00 8.19 6 ER2a ExonRegion 0 4.46 56.08 121.11 71.14 18.84 132.86 41.03 97.72 147.75 153.64 0.60 0.00 0.00 0.00 0.70 0.00 0.00 334.99 154.42 147.52 2.26 0.00 0.00 7 E2_Da NovelBoundary 0 20.37 0.00 5.26 4.03 20.54 19.19 14.13 8.09 11.57 7.66 2.68 0.00 0.00 2.47 0.00 3.76 0.00 3.73 3.95 2.56 5.99 0.00 0.00 8 E2a_E3a KnownJunction 0 8.82 54.53 158.10 64.89 27.16 139.58 39.13 133.16 204.83 231.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 339.59 162.45 209.52 0.00 0.00 0.00 9 E3_Aa NovelBoundary 0 45.19 12.30 12.36 13.15 20.20 15.45 12.76 33.48 6.74 11.87 4.74 0.00 0.00 0.00 0.00 12.30 0.00 14.43 17.88 12.14 5.87 2.94 12.29 10 ER3a ExonRegion 0 7.36 85.86 172.99 108.26 33.98 234.82 65.94 171.50 220.27 223.58 0.00 0.00 0.00 1.35 3.57 1.30 1.44 509.17 220.55 218.02 4.54 0.62 5.12 11 E3_Da NovelBoundary 0 16.67 8.42 14.43 13.25 4.33 2.67 19.43 5.71 5.61 7.01 0.00 5.85 6.82 0.00 10.26 6.92 4.49 8.54 21.18 12.78 5.56 0.00 12.55 12 E3a_E4a KnownJunction 0 18.15 127.87 239.32 153.53 76.91 363.65 95.66 199.21 237.93 264.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 706.90 421.19 312.24 2.72 5.94 0.00 13 Ix Intron 0 13.30 3.14 4.23 5.63 7.61 5.02 7.48 5.15 4.46 4.86 1.09 1.79 3.51 1.71 2.19 3.65 0.58 4.80 3.24 2.76 3.40 1.61 3.20 14 Ix_SR1 SilentIntronRegion 0 10.81 2.11 5.67 7.57 4.99 4.05 6.30 4.44 4.70 5.43 1.20 0.00 2.04 2.39 2.43 3.49 0.68 6.15 5.06 3.82 4.26 1.29 3.24 15 Ix_AR1 ActiveIntronRegion 0 22.04 6.37 1.91 3.56 11.83 9.00 11.89 7.52 3.98 4.81 0.76 3.53 8.17 0.47 1.34 2.33 0.43 1.68 0.64 1.94 2.87 2.80 1.92 16 Ix_AR2 ActiveIntronRegion 0 36.24 0.00 0.00 1.33 19.71 0.76 6.62 4.93 0.93 2.91 0.00 2.96 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 1.78 0.00 17 ER4a ExonRegion 0 11.28 104.41 188.27 116.12 52.59 375.00 89.92 159.40 212.75 224.93 0.34 1.19 1.29 2.35 3.42 4.97 0.00 482.87 180.76 234.44 7.43 3.85 4.95 18 E4_Da NovelBoundary 0 9.48 17.23 18.30 20.81 27.33 64.51 58.12 31.38 15.45 15.77 0.00 0.00 6.33 0.00 0.00 3.33 0.00 44.36 17.88 29.02 10.75 0.00 0.00 19 E4a_E5a KnownJunction 0 0.00 72.55 163.65 82.17 19.69 328.22 46.06 87.61 197.31 217.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 386.93 120.10 252.09 0.00 2.76 0.00 20 E4a_E6a NovelJunction 0 0.00 6.31 9.05 3.60 4.24 19.65 12.59 3.66 10.10 20.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.14 16.38 3.26 0.00 0.00 0.00 21 Ix Intron 0 8.11 16.61 13.59 22.22 18.88 33.01 21.40 15.89 17.28 15.00 1.93 2.52 3.57 0.68 3.19 4.29 1.28 21.84 10.97 23.88 3.92 1.16 7.83 22 Ix_SR1 SilentIntronRegion 0 8.13 16.65 13.62 22.27 18.92 33.08 21.45 15.92 17.32 15.03 1.94 2.52 3.58 0.69 3.19 4.30 1.29 21.89 11.00 23.93 3.93 1.16 7.85 23 Ix_SR1 SilentIntronRegion 0 17.45 17.16 17.09 16.06 21.92 20.68 19.89 12.36 18.15 12.54 1.96 4.09 15.20 0.86 3.65 5.14 0.83 20.07 10.06 19.40 7.81 2.49 11.99 24 Ix_AR1 ActiveIntronRegion 0 19.31 21.61 22.98 35.78 29.10 16.27 26.15 18.80 22.70 25.09 1.93 0.00 16.42 0.00 5.80 5.94 3.30 28.64 7.96 39.36 4.41 4.17 7.71 25 Ix_AR2 ActiveIntronRegion 0 13.44 23.20 18.86 27.87 16.59 20.91 21.74 26.29 23.07 18.35 1.48 2.54 8.84 1.74 4.39 4.57 2.19 28.12 7.46 25.29 8.51 0.95 10.93 26 Ix_AR3 ActiveIntronRegion 0 8.74 5.05 0.00 0.00 4.40 4.53 8.78 0.00 0.00 0.00 3.18 0.00 0.00 8.33 9.41 7.33 0.00 0.00 2.62 14.04 16.39 3.43 2.42 27 E5_Aa NovelBoundary 0 9.78 6.45 38.32 46.85 12.14 26.01 21.73 63.83 38.22 36.88 6.58 0.00 0.00 4.94 20.89 16.15 0.00 59.94 13.55 16.55 22.12 3.00 20.06 28 ER5a ExonRegion 0 11.33 78.08 156.76 99.17 37.87 310.82 64.74 108.05 173.77 171.98 6.04 6.41 7.21 15.51 16.40 15.83 6.26 371.04 138.96 176.16 22.20 10.38 21.25 29 E5_Da NovelBoundary 0 6.96 21.71 23.45 40.22 38.71 84.38 20.76 44.89 30.99 25.25 6.90 0.00 6.33 2.41 13.35 8.72 4.77 33.87 8.94 53.05 36.33 3.06 16.13 30 E5a_E6a KnownJunction 0 0.00 106.43 110.20 67.82 25.64 416.07 100.38 101.00 154.28 188.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 319.94 177.42 149.57 0.00 5.57 0.00 31 Ix Intron 0 17.16 22.01 26.21 38.29 23.21 35.16 14.12 33.62 27.54 27.30 5.80 3.49 10.29 13.69 10.97 19.16 5.76 34.11 19.37 20.44 18.93 8.87 23.22 32 Ix_AR1 ActiveIntronRegion 0 25.99 14.63 39.62 40.85 15.15 31.03 12.69 33.52 27.49 23.74 3.78 1.55 6.61 13.07 13.96 20.46 5.74 44.98 18.59 26.62 21.39 11.92 27.41 33 Ix_SR1 SilentIntronRegion 0 15.10 22.61 21.43 29.56 26.84 33.94 14.50 24.55 22.15 20.69 4.56 3.40 9.44 11.66 8.62 15.60 4.27 25.82 16.60 15.82 14.69 6.54 17.05 34 Ix_AR2 ActiveIntronRegion 0 15.45 27.86 29.55 67.54 18.81 44.30 14.36 66.90 47.36 55.27 12.48 5.90 17.34 21.82 16.45 30.86 11.20 52.97 30.43 30.85 31.88 14.16 41.33 35 E6_Aa NovelBoundary 0 10.08 23.22 17.15 23.11 14.26 24.30 26.50 33.39 21.64 30.06 7.05 6.30 0.00 26.84 0.00 6.92 4.02 23.42 8.28 9.40 16.68 5.39 7.51 36 ER6a ExonRegion 0 21.92 89.88 105.98 68.08 29.71 293.31 67.40 95.43 133.36 175.27 4.12 4.31 3.66 18.45 11.56 19.80 3.90 216.50 100.70 128.67 16.34 10.11 20.05 37 E6_Da NovelBoundary 0 38.75 28.22 31.87 26.24 29.37 40.72 26.37 25.63 35.10 41.69 14.16 6.00 20.45 26.66 41.78 29.48 13.09 45.31 17.60 34.26 42.50 14.21 61.03 38 E6a_E7a KnownJunction 0 3.56 96.82 101.33 66.13 37.10 265.70 72.69 85.52 116.06 183.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 236.99 96.47 157.56 2.47 0.00 0.00 39 Ix Intron 0 16.78 10.48 11.58 19.32 10.61 11.87 10.85 25.18 18.97 27.33 5.62 1.88 17.70 16.28 15.67 24.35 6.54 14.07 20.20 16.87 31.43 10.46 23.28 40 Ix_AR1 ActiveIntronRegion 0 24.64 13.63 14.58 26.37 10.65 12.41 11.83 29.18 22.90 33.02 6.86 2.39 13.75 16.68 18.08 33.33 9.19 19.89 19.34 22.19 38.90 11.23 28.23 41 Ix_SR1 SilentIntronRegion 0 6.54 6.41 7.75 10.20 10.67 11.30 9.66 20.19 14.00 20.10 4.03 1.23 23.17 15.96 12.66 12.72 3.10 6.53 21.58 10.02 21.90 9.57 17.00 42 E7_Aa NovelBoundary 0 7.56 0.00 16.47 6.43 20.12 15.67 11.26 10.68 6.92 12.73 6.95 0.00 0.00 4.77 4.45 0.00 0.00 10.99 12.14 15.21 11.37 2.51 11.27 43 ER7a ExonRegion 0 5.76 68.42 134.12 76.08 37.50 333.90 68.46 90.53 126.26 163.48 1.46 2.77 1.42 4.55 3.82 2.18 3.63 234.29 83.42 147.79 7.90 1.53 4.54 44 E7_Da NovelBoundary 0 0.00 16.25 11.97 10.06 15.53 18.40 25.92 8.21 14.26 21.46 4.11 7.65 0.00 4.89 17.80 8.29 4.77 26.12 41.13 6.52 4.88 0.00 20.06 45 E7a_E8a KnownJunction 0 7.56 76.10 138.17 77.28 80.14 510.39 72.12 107.29 122.57 175.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 236.70 82.73 152.19 0.00 0.00 0.00 46 E7a_E9a NovelJunction 0 0.00 2.70 7.98 3.63 0.00 26.01 6.71 7.27 9.72 6.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.76 4.52 13.04 0.00 2.82 0.00 47 Ix Intron 0 8.16 4.52 11.44 11.97 8.93 14.61 8.15 14.13 16.99 16.15 2.94 5.03 9.98 7.17 10.49 8.15 3.67 20.19 12.87 14.19 13.80 4.71 12.19 48 Ix_SR1 SilentIntronRegion 0 8.18 4.53 11.46 11.99 8.95 14.65 8.16 14.16 17.02 16.19 2.94 5.04 10.00 7.19 10.52 8.17 3.68 20.23 12.90 14.23 13.83 4.72 12.21 49 E8_Aa NovelBoundary 0 0.00 2.76 12.83 13.02 4.33 5.51 12.41 17.91 9.23 8.52 0.00 0.00 6.17 7.06 0.00 10.77 0.00 14.59 13.27 18.47 12.36 0.00 8.02 50 ER8a ExonRegion 0 13.97 61.97 137.09 72.89 38.74 283.63 56.04 107.42 121.53 159.16 4.44 2.04 2.21 3.77 7.99 4.54 4.99 245.61 103.67 147.24 9.66 3.98 8.03 51 E8_Da NovelBoundary 0 13.11 18.62 7.78 14.05 8.66 14.03 11.92 24.48 18.49 17.46 2.32 0.00 6.82 6.95 15.20 11.71 4.77 36.60 9.13 11.63 11.86 5.69 3.93 52 E8a_E9a KnownJunction 0 3.78 143.79 144.14 89.50 65.53 625.09 100.96 146.39 152.08 186.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 356.13 171.30 191.43 0.00 0.00 4.27 53 E9_Aa NovelBoundary 0 7.11 2.70 11.09 9.96 0.00 10.90 6.14 13.10 10.36 11.93 0.00 0.00 0.00 4.53 14.83 0.00 0.00 36.81 12.89 15.02 19.52 2.57 7.51 54 ER9a ExonRegion 0 9.83 93.81 194.32 129.81 38.33 330.83 67.76 119.42 159.47 175.22 1.92 1.33 1.55 1.37 2.15 1.83 1.30 325.60 100.33 130.55 5.24 2.30 4.32