Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C20orf91 Gene 0 1.43 2.03 7.32 3.22 8.94 28.95 4.90 9.67 11.44 5.14 1.40 2.38 0.44 1.63 0.54 1.05 1.01 2.77 1.62 3.60 0.12 0.34 0.35 2 246000 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 376398 Transcript 0 0.82 3.32 8.11 4.77 12.71 34.41 7.88 14.27 18.29 4.97 1.46 3.25 0.00 1.73 0.29 0.67 0.72 1.55 1.01 2.64 0.03 0.37 0.16 4 389261 Transcript 0 0.00 0.00 0.23 0.00 0.67 0.46 0.00 0.00 0.00 0.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.34 0.40 1.59 0.00 0.00 0.00 5 415411 Transcript 0 0.00 0.06 0.93 0.02 0.16 0.45 0.38 0.17 0.00 0.10 0.07 0.00 0.00 0.00 0.00 0.00 0.00 0.30 0.00 0.13 0.00 0.00 0.00 6 439881 Transcript 0 1.06 1.94 5.70 1.95 29.46 60.25 15.53 11.17 2.05 1.75 0.82 4.42 1.20 1.28 1.59 1.98 0.81 4.46 6.25 3.63 0.14 0.79 1.28 7 471057 Transcript 0 0.50 0.48 1.77 0.03 1.91 2.63 1.90 0.00 2.63 0.81 1.35 2.55 0.00 0.71 0.00 0.71 0.00 0.00 0.00 0.51 0.00 0.00 0.00 8 482133 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 453613 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ER1a ExonRegion 0 9.59 2.65 7.78 7.56 7.29 27.31 9.12 9.75 3.93 9.10 1.60 8.28 4.11 1.74 0.73 4.57 3.12 5.43 2.58 9.08 0.00 0.49 0.69 11 E1_Da NovelBoundary 0 3.19 5.26 8.54 10.65 14.01 24.82 16.38 8.79 5.18 15.47 4.53 18.76 0.00 2.47 4.45 0.00 4.77 21.51 4.80 21.92 0.00 3.00 0.00 12 E1a_E7a KnownJunction 0 3.33 0.00 0.00 2.06 0.00 2.21 0.00 0.00 0.00 0.00 0.00 10.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.00 0.00 0.45 0.00 1.33 0.91 0.00 0.00 0.00 0.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.69 0.79 3.18 0.00 0.00 0.00 14 E2a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3a ExonRegion 0 0.00 0.00 3.74 0.17 0.00 3.14 0.68 0.66 0.00 0.00 0.50 0.00 0.00 0.00 0.00 0.00 0.00 2.10 0.00 0.00 0.00 0.00 0.00 16 E3a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E4_Aa NovelBoundary 0 3.78 0.00 17.00 7.76 58.74 40.77 12.85 23.17 4.92 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.08 4.61 2.68 0.00 0.00 4.01 18 ER4a ExonRegion 0 4.69 3.76 12.88 2.26 36.70 69.55 20.82 22.38 5.44 2.53 2.86 12.17 7.17 5.61 8.77 9.89 4.88 9.09 11.77 5.70 0.81 3.08 2.17 19 E4_Da NovelBoundary 0 0.00 6.31 27.08 14.25 19.69 41.34 26.81 14.62 32.29 22.67 0.00 21.01 0.00 4.89 0.00 7.86 4.77 9.41 0.00 2.56 0.00 0.00 0.00 20 E4a_E5a KnownJunction 0 0.00 0.00 1.24 0.00 67.57 147.47 22.83 21.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 5.94 0.00 0.00 0.00 21 E4a_E7a NovelJunction 0 0.00 0.00 5.03 0.00 12.90 11.30 5.96 16.68 1.45 1.64 0.00 0.00 0.00 0.00 0.00 7.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E5_Aa NovelBoundary 0 9.26 14.60 37.55 32.36 88.20 42.02 57.01 19.39 17.59 38.14 7.90 16.96 17.69 2.35 9.02 6.32 22.07 4.60 27.86 22.05 11.43 13.78 37.90 23 ER5a ExonRegion 0 0.00 4.09 5.92 3.98 55.42 117.97 38.53 12.90 0.00 1.12 0.00 9.57 0.00 0.00 0.00 1.99 0.00 6.30 9.30 3.92 0.00 0.00 1.43 24 E5_Da NovelBoundary 0 0.00 19.01 48.46 12.25 39.13 23.68 21.46 11.25 7.67 12.68 2.68 18.01 0.00 2.53 0.00 0.00 0.00 12.97 9.13 0.00 0.00 0.00 0.00 25 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 4.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.22 0.00 0.00 0.00 3.84 26 E5a_E7a NovelJunction 0 0.00 0.00 0.00 0.00 12.39 54.97 2.03 11.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.33 0.00 0.00 0.00 4.10 27 E5a_E8a NovelJunction 0 0.00 0.00 0.00 0.00 20.12 18.97 4.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E6_Aa NovelBoundary 0 6.22 2.89 10.79 18.45 16.64 30.61 10.78 34.50 17.10 12.06 2.63 6.30 0.00 2.30 0.00 4.36 0.00 15.30 13.37 6.14 0.00 0.00 8.11 29 ER6a ExonRegion 0 1.67 3.80 14.15 5.47 17.05 21.78 10.99 10.33 6.88 6.86 2.06 4.76 0.00 2.09 0.77 0.00 0.00 8.81 7.19 6.23 0.00 1.67 0.22 30 E6_Da NovelBoundary 0 0.00 0.00 20.73 15.25 45.08 31.63 20.93 12.08 20.28 22.89 0.00 7.35 13.31 0.00 0.00 8.20 0.00 15.84 12.33 17.96 0.00 0.00 0.00 31 E6a_E7a NovelJunction 0 0.00 0.00 1.27 1.23 4.24 15.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E6a_E7c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 E6a_E8a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 19.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 E7_Ab NovelBoundary 0 9.78 0.00 17.59 21.61 8.06 26.12 6.27 15.57 21.12 24.93 4.53 6.30 0.00 0.00 0.00 4.02 0.00 17.91 9.51 6.46 0.00 0.00 0.00 35 ER7a ExonRegion 0 2.12 0.00 0.23 2.79 0.00 12.75 0.00 2.14 0.88 0.38 0.00 7.01 0.67 0.00 0.00 0.00 0.00 2.20 1.21 0.00 0.00 0.00 0.00 36 ER7b ExonRegion 0 0.35 0.00 1.84 2.04 4.35 25.24 1.32 2.32 0.74 1.63 0.00 4.37 0.00 0.57 1.02 1.05 0.00 2.99 0.06 2.57 2.20 0.00 0.00 37 E7_Ac KnownBoundary 0 0.00 9.08 36.40 31.86 46.10 79.10 36.30 38.94 17.56 13.70 7.48 18.61 6.82 14.66 0.00 8.37 0.00 18.49 22.87 20.52 0.00 0.00 0.00 38 ER7c ExonRegion 0 1.43 0.00 3.30 4.98 4.04 12.95 0.00 8.01 0.08 5.24 1.07 0.00 0.00 0.00 0.00 0.91 0.00 2.19 0.52 4.95 0.00 0.00 2.16 39 E7_Ad KnownBoundary 0 3.78 0.00 6.95 10.26 20.37 70.64 4.06 43.91 11.66 17.22 4.69 0.00 0.00 0.00 4.45 0.00 0.00 11.28 0.00 6.26 0.00 0.00 3.84 40 ER7d ExonRegion 0 5.42 1.54 7.80 5.84 8.31 18.23 2.03 10.42 12.05 6.97 3.34 0.00 0.00 0.12 0.00 0.41 0.00 8.09 0.72 5.19 2.47 0.00 2.00 41 E7_Ae KnownBoundary 0 0.00 0.00 17.18 1.80 14.77 13.40 6.62 16.02 17.33 7.71 4.21 0.00 0.00 2.24 0.00 0.00 0.00 8.54 0.00 2.49 5.44 0.00 4.35 42 E7_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E7a_E10a NovelJunction 0 0.00 0.00 4.26 1.56 0.00 5.00 0.00 25.47 5.67 1.53 4.37 0.00 0.00 7.18 0.00 0.00 4.58 0.00 0.00 0.00 0.00 0.00 0.00 44 E7a_E10b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER7e ExonRegion 0 12.70 6.10 11.23 8.18 13.38 37.59 5.30 12.10 16.06 5.73 1.93 0.00 0.00 3.25 2.42 2.97 0.00 12.32 3.19 2.13 4.41 0.00 2.94 46 ER7f ExonRegion 0 8.23 3.93 7.85 4.86 5.11 34.55 2.38 8.09 8.53 3.70 1.49 2.07 0.00 2.25 2.04 4.46 0.00 8.94 2.17 2.08 0.80 0.00 1.00 47 E7b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E7b_E10b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER8a ExonRegion 0 0.00 0.00 3.16 2.63 9.52 25.97 1.32 1.45 0.00 4.16 3.64 2.11 0.00 0.00 0.00 1.45 0.00 4.51 0.00 7.67 0.00 0.00 1.30 50 E8_Da KnownBoundary 0 0.00 0.00 11.32 4.10 15.79 43.16 1.77 0.00 3.39 13.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.66 0.00 5.75 0.00 0.00 8.54 51 ER8b ExonRegion 0 0.00 0.00 3.21 3.91 7.91 42.80 6.56 1.73 0.00 4.37 1.81 0.00 0.00 3.01 0.00 0.00 0.00 2.87 0.00 4.89 0.00 0.00 2.00 52 E8_Db NovelBoundary 0 0.00 0.00 2.57 1.47 16.47 81.32 14.26 1.68 4.34 4.51 4.63 0.00 0.00 9.24 0.00 0.00 0.00 0.00 0.00 2.49 0.00 0.00 0.00 53 E8c_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 E8c_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 E8c_E10b NovelJunction 0 0.00 0.00 8.46 0.00 19.02 121.98 9.67 0.00 0.00 11.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 0.00 0.00 0.00 56 ER8c ExonRegion 0 1.69 0.00 2.21 2.04 3.75 35.76 3.84 1.90 0.00 1.49 0.58 0.00 0.00 4.87 0.58 0.00 0.00 0.55 0.00 0.85 0.00 0.00 0.00 57 E9_Aa NovelBoundary 0 3.70 16.44 12.12 1.63 11.12 8.01 4.50 9.36 3.12 7.12 0.00 12.45 6.82 2.47 5.93 0.00 0.00 0.00 0.00 5.62 0.00 0.00 0.00 58 ER9a ExonRegion 0 1.01 0.97 3.54 0.06 3.83 5.26 3.80 0.00 5.26 1.63 2.71 5.10 0.00 1.41 0.00 1.42 0.00 0.00 0.00 1.01 0.00 0.00 0.00 59 E10_Ab NovelBoundary 0 7.11 0.00 3.22 0.00 20.46 53.89 10.82 0.00 1.59 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.33 0.00 0.00 0.00 60 ER10a ExonRegion 0 4.23 0.00 3.97 3.38 4.17 13.57 1.22 5.25 3.11 1.65 1.70 7.10 0.00 2.47 5.22 2.73 0.00 3.25 0.00 4.26 0.00 0.00 0.00 61 ER10b ExonRegion 0 0.84 0.51 8.32 1.89 1.64 11.73 0.52 1.56 4.90 2.41 1.74 3.15 0.00 1.37 1.05 1.16 0.00 3.80 1.61 2.16 0.00 0.00 0.00 62 E10a_E11a KnownJunction 0 6.67 3.22 0.00 2.03 0.00 17.32 0.00 1.81 3.36 3.06 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 E10a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 E11_Aa NovelBoundary 0 0.00 5.72 23.24 7.46 22.92 19.25 8.30 19.26 11.57 10.61 0.00 14.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 ER11a ExonRegion 0 7.00 0.00 4.34 3.12 3.02 19.77 2.67 4.59 8.31 1.71 1.86 1.73 0.00 2.24 0.00 0.00 1.98 1.85 1.56 1.97 0.00 0.00 1.28 66 E11_Da KnownBoundary 0 6.82 0.00 10.50 7.42 24.28 43.55 4.28 14.75 12.85 0.00 7.69 0.00 0.00 0.00 0.00 0.00 4.58 2.07 4.80 0.00 0.00 0.00 4.35 67 ER11b ExonRegion 0 0.27 1.15 7.97 1.71 5.52 22.87 3.19 8.37 11.11 6.39 1.23 0.85 0.00 1.21 0.07 0.20 1.33 1.66 0.90 3.10 0.00 0.00 0.25 68 E11_Db KnownBoundary 0 2.96 0.00 8.28 2.06 12.05 36.17 1.81 12.98 18.03 16.01 5.21 0.00 0.00 0.00 0.00 0.00 4.11 4.64 0.00 0.00 0.00 0.00 0.00 69 E11b_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 ER11c ExonRegion 0 0.66 2.74 7.80 4.11 10.75 43.21 3.22 14.25 20.45 6.51 1.78 1.08 0.00 2.51 0.57 0.92 0.90 3.02 1.43 4.05 0.06 0.55 0.31 71 E11_Ab KnownBoundary 0 0.00 2.63 8.66 0.00 12.05 53.78 3.58 16.92 23.67 6.50 0.00 0.00 0.00 4.94 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72 ER11d ExonRegion 0 1.27 7.46 15.78 5.72 17.95 42.08 9.86 17.90 20.45 4.38 1.22 4.03 0.00 2.77 0.00 0.30 2.09 0.75 1.86 3.01 0.76 0.28 0.00 73 E11_Dc KnownBoundary 0 5.63 3.35 8.40 6.36 21.14 21.12 16.56 20.91 20.20 3.33 2.16 5.70 0.00 2.30 0.00 0.00 3.74 1.95 4.42 0.00 0.00 3.12 0.00 74 ER11e ExonRegion 0 0.98 3.89 8.42 5.43 14.68 25.60 12.53 14.29 16.14 3.43 1.15 5.42 0.00 0.96 0.00 0.42 0.55 0.08 0.59 1.23 0.00 0.18 0.00 75 E11_Dd NovelBoundary 0 0.00 0.00 10.61 2.06 0.00 0.00 21.11 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76 ER12a ExonRegion 0 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78 ER13a ExonRegion 0 0.00 0.43 2.71 0.00 1.14 0.00 1.98 0.55 0.00 0.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.91 0.00 0.00 0.00 79 IG10 Intergenic 0 0.05 0.53 26.21 1.07 13.82 1.20 7.20 2.35 1.10 2.06 0.02 0.08 0.04 0.07 0.11 0.07 0.04 0.11 0.21 0.29 0.02 0.00 0.00 80 IG10_SR1 SilentIntergenicRegion 0 0.05 0.53 26.22 1.07 13.82 1.20 7.20 2.35 1.10 2.06 0.02 0.08 0.04 0.07 0.11 0.07 0.04 0.11 0.21 0.29 0.02 0.00 0.00