Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RPN2 Gene 0 425.43 358.32 480.67 476.87 394.71 517.51 323.25 467.70 321.45 514.81 850.98 954.85 960.89 1008.37 1113.52 857.44 699.25 763.92 384.77 572.43 967.50 1036.53 709.46 2 456102 Transcript 0 1.60 0.34 0.68 0.96 1.75 0.02 1.29 1.22 0.01 1.32 2.20 2.31 0.76 5.73 3.25 4.21 1.05 2.23 2.59 2.08 1.06 0.04 3.74 3 237530 Transcript 1 15.00 23.81 5.01 2.74 22.86 68.39 31.78 8.31 7.27 13.47 55.32 5.79 8.81 39.15 37.32 30.23 45.10 35.20 17.71 22.16 55.21 30.07 43.37 4 373622 Transcript 0 20.60 78.29 38.39 205.13 42.17 147.00 33.51 154.26 107.99 66.70 34.86 28.65 40.16 38.90 57.94 10.93 12.54 56.38 19.82 198.57 17.08 35.60 18.35 5 373632 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 397161 Transcript 0 0.00 0.00 0.98 0.27 0.00 1.10 0.40 0.35 0.74 0.00 0.58 0.00 1.88 3.57 0.00 2.08 0.00 0.00 0.00 3.83 0.00 0.00 4.70 7 338768 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 373628 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 373623 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 462163 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 437329 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 456400 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 470352 Transcript 0 133.56 23.86 16.83 27.97 43.17 38.37 40.92 26.87 19.25 28.09 87.28 68.52 45.46 65.45 66.14 76.08 61.13 41.08 27.57 25.63 32.06 27.39 39.67 14 ER1a ExonRegion 0 1.03 1.03 2.05 0.99 5.25 0.07 3.87 1.25 0.04 0.04 6.61 6.93 2.28 3.37 0.86 4.50 3.14 0.18 7.77 3.18 0.04 0.12 0.20 15 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2a ExonRegion 0 15.00 23.81 5.01 2.74 22.86 68.39 31.78 8.31 7.27 13.47 55.32 5.79 8.81 39.15 37.32 30.23 45.10 35.20 17.71 22.16 55.21 30.07 43.37 17 E2_Ab KnownBoundary 0 82.09 122.74 27.08 14.78 88.54 264.28 142.42 47.36 41.09 66.78 108.71 22.66 14.45 107.19 58.59 92.45 97.71 291.46 75.48 90.44 187.86 109.49 163.47 18 ER2b ExonRegion 0 12.03 28.98 16.07 15.01 11.90 50.94 31.00 23.23 24.73 43.81 87.57 12.44 6.18 60.07 46.96 42.12 59.96 133.30 37.33 57.96 132.95 61.11 48.52 19 E2_Ac KnownBoundary 0 0.00 18.09 10.73 13.72 4.16 5.00 2.16 18.57 27.20 47.89 35.96 0.00 0.00 18.95 19.28 10.08 27.40 30.26 0.00 37.65 78.15 22.35 10.59 20 E2_Ad KnownBoundary 0 0.00 0.00 3.55 2.00 0.00 0.00 0.00 7.39 6.94 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.45 0.00 0.00 0.00 0.00 0.00 21 E2_Ae KnownBoundary 0 3.78 0.00 13.84 7.69 0.00 0.00 2.25 5.01 7.15 17.62 5.37 0.00 0.00 8.95 0.00 17.43 0.00 34.24 13.93 16.04 37.81 9.37 21.77 22 ER2c ExonRegion 0 6.35 30.50 14.70 26.58 5.35 25.67 9.27 31.11 35.20 52.18 100.51 8.66 4.69 121.81 108.80 92.14 77.57 131.19 47.78 90.43 193.93 116.68 93.97 23 ER2d ExonRegion 0 18.84 36.20 20.46 27.53 13.38 35.21 16.42 30.42 41.50 59.29 101.86 12.12 6.57 127.49 133.46 99.86 78.23 175.54 49.37 102.98 194.37 124.80 115.41 24 ER2e ExonRegion 1 216.70 164.67 70.63 80.38 148.81 383.08 189.02 84.52 90.10 142.57 401.20 21.98 33.07 518.43 534.05 626.20 344.39 607.44 281.54 303.82 557.14 502.45 652.39 25 E2a_E3a KnownJunction 1 699.90 444.72 158.07 180.06 424.96 1058.08 534.55 160.15 176.01 266.34 926.97 45.76 78.08 1351.47 1284.38 1640.42 787.56 1151.24 756.35 710.25 1132.19 1181.32 1591.51 26 ER3a ExonRegion 1 162.25 190.93 202.98 205.34 192.39 434.90 212.02 248.48 219.78 357.73 807.99 160.12 194.52 723.55 607.21 751.81 675.54 829.84 414.84 584.60 998.39 671.56 664.73 27 E3a_E4a KnownJunction 1 174.48 223.25 356.32 446.93 126.83 180.35 136.37 465.08 356.01 541.48 874.33 345.41 397.05 1708.29 1693.31 2075.01 689.01 1319.13 1195.05 987.52 982.32 1862.42 1826.60 28 E3a_E5a KnownJunction 0 0.00 0.00 1.51 1.40 0.00 0.00 3.97 0.00 0.00 0.00 2.68 0.00 0.00 4.94 11.37 0.00 0.00 2.32 3.86 2.56 0.00 3.12 0.00 29 E3a_E7a KnownJunction 0 3.78 0.00 0.00 1.90 0.00 0.00 0.00 2.42 0.00 3.92 0.00 0.00 0.00 13.83 4.45 8.12 0.00 6.51 0.00 3.07 3.15 0.00 11.01 30 ER4a ExonRegion 0 122.29 165.84 340.54 362.67 254.45 405.33 174.31 359.10 322.70 488.52 830.02 625.65 547.95 1088.65 974.55 1230.18 633.81 1250.62 565.73 728.41 1014.72 1036.62 1039.17 31 E4a_E5a KnownJunction 0 148.17 206.67 400.75 414.07 635.91 886.36 364.96 396.53 319.21 525.85 886.80 906.75 790.53 1104.60 825.64 737.41 810.56 842.75 366.60 788.29 1210.16 1077.53 580.21 32 E4a_E7a KnownJunction 0 3.78 0.00 1.83 2.00 0.00 0.00 0.00 0.00 1.62 1.67 2.42 0.00 14.77 9.54 4.94 0.00 4.77 4.64 4.33 0.00 2.59 0.00 0.00 33 ER5a ExonRegion 0 220.14 319.88 428.46 410.21 289.22 592.06 307.94 431.27 354.61 549.39 1170.92 846.83 633.50 1237.93 1015.50 837.28 885.28 992.37 400.79 758.08 1409.52 1054.33 677.50 34 E5a_E6a KnownJunction 0 0.00 6.58 10.97 9.02 0.00 15.73 4.33 20.50 23.29 10.74 30.69 18.01 0.00 9.48 8.90 28.37 16.74 42.90 11.86 26.21 20.63 18.19 8.71 35 E5a_E7a KnownJunction 0 430.08 351.52 438.19 445.10 159.85 466.95 205.71 498.72 349.94 575.52 1250.90 891.74 537.14 1318.39 1192.41 1098.26 1048.62 1121.98 502.70 780.11 1551.72 1317.19 853.55 36 ER6a ExonRegion 0 0.00 4.49 15.60 8.60 3.51 13.18 7.61 19.88 16.11 13.72 38.70 11.36 4.10 21.86 5.80 32.57 33.83 43.31 6.97 27.44 14.37 13.59 7.04 37 E6a_E7a KnownJunction 0 3.11 0.00 21.17 12.49 3.31 11.02 14.04 15.28 10.30 18.59 41.85 6.30 0.00 41.03 9.52 41.10 29.73 36.31 12.80 22.12 11.92 13.59 12.12 38 ER7a ExonRegion 0 245.66 232.93 427.20 404.87 185.47 452.27 225.40 444.17 375.23 539.32 1036.54 968.55 628.16 1371.48 1128.82 1032.58 867.70 1198.75 418.96 729.14 1401.68 1128.50 787.83 39 E7a_E8a KnownJunction 0 314.20 290.61 526.92 471.07 293.04 568.25 366.06 474.65 369.44 524.02 1154.08 1201.44 912.28 1636.48 1522.47 1145.51 939.97 1267.89 449.42 854.25 1448.80 1187.68 936.86 40 ER8a ExonRegion 0 266.74 278.15 482.33 451.94 286.62 547.48 333.13 419.30 349.67 564.64 1042.26 1036.73 850.91 1338.25 1247.09 1091.89 999.88 1045.29 426.89 704.93 1532.97 1130.09 852.02 41 E8a_E9a KnownJunction 0 491.27 412.36 506.81 470.14 361.97 668.25 357.10 510.71 342.13 618.66 1175.88 988.22 749.46 1365.66 1509.37 1294.02 1053.01 1137.11 527.17 797.69 1532.76 1180.34 988.68 42 ER9a ExonRegion 0 424.71 500.99 577.64 591.46 343.07 544.81 344.62 574.30 425.58 695.39 1251.24 1248.38 1054.71 1480.95 1451.37 1120.44 1142.19 1144.57 516.49 816.81 1650.72 1315.35 945.26 43 E9_Da NovelBoundary 0 185.96 180.43 237.57 224.65 78.44 148.61 92.17 235.68 159.58 253.12 221.48 329.21 305.01 247.87 190.87 228.91 216.74 317.08 118.50 212.27 404.64 372.18 113.87 44 E9b_E10a KnownJunction 0 420.07 705.93 643.27 626.76 591.00 767.91 534.77 633.03 454.60 723.39 1240.47 1071.50 1045.87 1320.33 1532.24 1215.75 1076.20 1078.74 580.44 736.13 1768.32 1529.25 855.68 45 ER9b ExonRegion 0 382.74 576.18 555.09 549.70 423.21 639.08 397.41 596.03 424.67 679.16 1198.72 1187.00 1241.29 1304.17 1362.62 1063.53 985.87 982.69 473.03 691.49 1626.34 1370.26 811.49 46 ER10a ExonRegion 0 512.05 648.22 701.65 701.87 672.33 875.62 600.56 688.59 503.48 765.42 1250.77 1402.66 1543.20 1609.05 1554.93 1261.55 1128.97 1068.87 563.87 814.60 1492.97 1550.22 1021.39 47 E10_Da NovelBoundary 0 328.13 477.35 555.07 551.68 429.29 573.53 436.95 576.52 381.51 570.57 724.08 840.57 1246.51 1042.62 1090.68 848.50 653.86 673.20 313.51 627.16 788.71 964.00 820.00 48 E10b_E11a KnownJunction 1 723.24 748.16 972.70 941.74 1062.56 957.06 822.93 916.28 597.77 872.02 1201.41 1961.74 2823.03 1805.12 1691.70 1667.34 1040.77 1158.87 616.58 909.41 1160.55 1719.87 1406.27 49 ER10b ExonRegion 1 530.82 658.88 850.41 829.54 824.31 866.29 665.33 853.86 551.11 823.25 1204.20 1743.91 2512.61 1753.94 1757.00 1532.43 1071.25 1046.20 549.58 912.48 1238.93 1557.36 1343.22 50 ER11a ExonRegion 0 749.75 563.61 941.77 895.96 761.17 777.25 626.78 848.18 600.46 943.02 1347.32 2056.99 2110.87 1613.38 1739.38 1541.75 1213.23 1071.42 584.21 959.75 1387.90 1826.05 1186.35 51 E11a_E12a KnownJunction 0 1023.89 646.27 910.11 945.37 583.11 797.84 568.42 871.34 626.87 915.62 1423.20 2360.12 2424.35 1633.54 1710.86 1543.87 1210.00 1079.32 672.87 953.77 1442.44 1913.55 1128.33 52 ER12a ExonRegion 0 920.27 787.64 955.19 938.02 839.81 963.84 631.04 899.02 616.95 967.81 1598.09 2410.85 2688.51 1766.87 1865.95 1567.31 1324.77 1237.83 735.65 988.80 1597.16 1850.32 1277.85 53 E12a_E13a KnownJunction 0 1515.08 1183.67 1091.77 1017.79 976.91 1164.90 852.87 901.78 650.05 1055.27 1665.47 2632.76 3187.29 1963.63 2450.96 1728.35 1465.92 1314.24 669.85 1129.80 1934.87 1962.41 1432.91 54 ER13a ExonRegion 0 807.66 904.47 908.72 915.20 788.14 885.41 685.11 821.39 581.96 939.55 1548.81 2235.81 2048.89 1684.56 1911.19 1459.80 1241.22 1279.12 693.38 965.53 1806.49 1811.79 1154.53 55 E13a_E14a KnownJunction 0 1026.85 906.15 877.50 994.38 1081.83 999.48 812.37 835.04 612.99 972.30 1629.15 2437.24 2285.24 1606.16 1806.30 1641.79 1355.12 1293.26 822.14 884.55 1714.14 1751.46 1294.10 56 ER14a ExonRegion 0 815.38 637.30 899.00 861.55 926.56 921.88 604.68 815.50 531.62 919.21 1416.70 2218.01 2294.14 1776.52 1987.60 1654.08 1217.72 1455.72 604.99 903.03 1622.94 1678.43 1304.04 57 E14_Ab KnownBoundary 0 942.39 673.37 959.78 943.80 919.10 943.49 738.62 859.60 515.56 861.54 1579.24 2562.08 2604.37 1932.20 2071.46 2336.14 1397.19 1566.81 870.43 1055.66 1773.32 1873.01 2006.63 58 ER14b ExonRegion 0 836.07 586.78 1020.37 1121.65 824.74 940.95 627.17 930.26 586.34 1002.39 1477.26 2254.77 2350.45 2003.54 2235.74 2442.82 1311.88 1651.93 1149.55 987.04 1535.03 3117.61 2077.47 59 E14_Ac KnownBoundary 0 1078.41 721.45 975.36 1171.68 1006.45 1190.17 716.50 839.14 535.96 883.22 1271.95 1923.48 2028.93 2074.76 2431.18 2469.01 1267.04 1254.75 1277.02 1065.44 1345.33 3918.70 2013.03 60 ER14c ExonRegion 0 825.89 550.76 907.89 976.73 693.34 844.69 513.78 844.51 522.66 915.84 1496.09 1622.96 1859.81 1594.98 1917.20 1500.88 1287.00 1182.84 732.15 860.83 1449.44 1862.13 1198.06 61 E14a_E15b KnownJunction 0 1194.21 626.34 956.23 903.08 752.12 883.87 545.06 915.95 526.59 949.57 1335.18 1349.39 1540.32 1264.53 1863.90 1145.51 1076.58 1152.65 499.03 884.29 1571.92 1314.68 1004.72 62 E15_Aa NovelBoundary 0 217.52 4.93 10.82 34.49 23.17 19.25 48.36 39.97 17.62 35.67 64.12 97.53 111.36 69.63 75.53 130.82 58.44 31.26 16.47 17.32 7.41 48.80 36.45 63 ER15a ExonRegion 0 133.56 23.86 16.83 27.97 43.17 38.37 40.92 26.87 19.25 28.09 87.28 68.52 45.46 65.45 66.14 76.08 61.13 41.08 27.57 25.63 32.06 27.39 39.67 64 E15_Ab KnownBoundary 0 146.40 32.30 22.91 33.80 32.09 42.48 24.02 35.69 27.26 42.15 71.39 68.72 25.97 66.28 54.27 45.89 68.82 56.50 16.09 31.51 11.37 15.55 59.92 65 ER15b ExonRegion 0 1098.35 635.68 875.48 923.20 798.83 922.66 550.81 856.53 530.60 902.36 1333.68 1693.22 1679.09 1706.76 2138.32 1489.42 1141.50 1387.81 677.78 850.96 1568.94 1875.89 1257.12 66 E15a_E16a KnownJunction 0 2427.17 1087.24 1031.34 1152.93 1239.64 1526.79 967.03 955.88 609.77 996.90 1583.40 2073.68 2119.67 1834.78 2172.33 3036.38 1442.82 1959.09 1363.71 993.34 1924.18 3957.46 2642.33 67 E15a_E17a KnownJunction 1 33.41 33.28 31.84 61.03 28.61 32.54 21.29 9.32 8.65 29.55 8.27 38.71 87.01 36.02 97.41 26.75 45.63 32.00 37.84 48.00 3.09 25.72 32.61 68 ER16a ExonRegion 0 952.39 641.47 749.49 762.46 704.11 986.89 602.13 718.98 456.56 739.35 1054.24 1446.85 1817.58 1397.50 2032.60 1511.23 886.19 1129.80 687.61 776.84 1318.53 1709.72 1263.55 69 E16a_E17a KnownJunction 0 908.53 592.20 838.20 684.66 885.06 999.94 699.01 713.29 460.64 680.66 872.96 1065.65 1191.97 1340.93 2007.67 828.59 760.63 805.85 442.37 682.83 1111.87 765.97 714.92 70 ER17a ExonRegion 0 714.74 493.84 711.70 662.13 842.09 913.55 565.47 614.74 404.44 634.18 913.19 980.79 1308.52 1406.27 1857.57 832.08 742.40 821.13 386.14 667.52 1221.55 909.29 767.62 71 E17a_E18a KnownJunction 0 920.39 519.32 701.07 782.65 825.64 777.68 524.87 639.93 404.25 687.61 798.89 686.32 984.03 1518.05 1832.50 679.82 517.25 885.03 303.35 683.66 976.21 869.82 667.11 72 E17a_E21a KnownJunction 0 0.00 0.00 0.00 1.80 0.00 0.00 0.00 4.97 0.00 0.00 2.68 5.55 0.00 0.00 0.00 0.00 0.00 2.03 0.00 0.00 2.41 0.00 4.27 73 ER18a ExonRegion 0 919.87 491.34 847.33 701.60 524.90 600.29 351.23 755.03 433.24 684.48 943.85 997.54 1308.66 1314.11 1798.91 945.80 663.78 785.42 384.50 706.53 957.04 1049.47 776.65 74 E18a_E19a KnownJunction 0 49.12 126.10 59.16 292.10 64.18 192.39 49.51 230.43 164.26 97.94 39.27 44.41 38.47 44.32 78.00 14.27 13.93 68.40 31.06 315.94 23.35 30.74 23.13 75 E18a_E21a KnownJunction 0 530.32 228.05 852.87 455.12 330.90 425.95 303.00 521.27 239.55 585.54 781.15 912.60 1205.44 901.41 1605.67 506.36 501.54 335.03 240.29 257.20 700.62 853.90 492.12 76 ER19a ExonRegion 0 30.25 107.48 50.37 280.04 57.92 206.00 43.86 209.97 149.68 90.10 43.53 44.38 63.90 63.37 74.04 18.02 18.84 83.73 22.16 257.58 29.11 51.05 26.12 77 E19a_E21a KnownJunction 0 3.04 79.59 42.52 246.95 46.60 189.61 36.70 176.66 118.00 78.76 53.96 25.81 58.28 42.97 68.36 11.45 17.39 71.09 22.21 218.21 15.88 57.50 24.16 78 ER20a ExonRegion 0 0.00 0.00 0.98 0.27 0.00 1.10 0.40 0.35 0.74 0.00 0.58 0.00 1.88 3.57 0.00 2.08 0.00 0.00 0.00 3.83 0.00 0.00 4.70 79 ER21a ExonRegion 0 476.27 335.22 716.35 667.98 635.83 728.84 428.05 719.39 372.72 635.77 799.59 1007.72 967.73 1018.83 1523.16 512.39 507.50 333.04 214.38 489.39 543.15 1050.34 534.86 80 E21_Da KnownBoundary 0 696.35 412.43 418.08 399.02 693.46 676.83 480.98 496.17 228.64 392.37 660.64 1031.89 974.77 974.64 1822.00 489.87 319.49 140.07 177.70 540.42 414.03 1080.04 490.58 81 ER21b ExonRegion 0 297.64 187.92 257.52 248.47 315.74 341.72 211.17 301.02 139.76 244.58 382.96 743.18 544.92 571.99 957.14 262.48 185.16 83.90 97.35 275.00 214.04 680.33 274.39 82 E21_Db KnownBoundary 0 7.26 0.00 0.00 1.80 7.98 5.17 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 83 E21_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 84 E21_Dd KnownBoundary 0 626.33 431.70 252.92 295.90 430.82 406.36 286.88 273.43 112.44 232.28 546.09 745.29 477.57 424.28 836.52 601.21 313.88 78.60 303.91 335.76 153.21 1793.65 476.67 85 ER21c ExonRegion 1 215.88 156.59 188.71 227.60 163.22 218.22 135.04 228.16 87.69 194.97 299.60 723.02 365.82 485.61 803.65 213.99 138.64 57.28 111.49 185.11 114.59 829.24 217.31 86 ER21d ExonRegion 0 416.57 308.92 212.43 246.43 326.20 303.91 193.54 269.64 109.70 216.66 459.33 685.63 419.97 521.64 907.83 474.73 255.07 75.25 244.69 257.25 125.41 1405.81 369.22 87 ER21e ExonRegion 0 368.82 271.51 308.45 324.29 226.92 181.06 144.61 372.17 187.69 304.93 409.87 740.52 701.97 314.81 634.50 252.57 197.13 42.12 118.66 224.14 119.67 976.45 208.84