Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C20orf3 Gene 0 175.07 155.87 240.53 203.15 150.15 357.27 137.83 200.80 259.50 234.54 272.72 92.04 81.84 309.73 277.98 193.46 195.73 238.58 186.69 171.17 368.63 209.36 173.70 2 217456 Transcript 0 163.59 127.51 161.85 132.74 104.66 304.07 107.76 107.38 140.12 146.70 157.15 49.14 34.24 225.31 160.86 124.76 131.35 148.61 147.49 106.05 234.40 158.01 121.53 3 447138 Transcript 0 10.15 2.76 6.24 4.53 0.00 0.00 0.00 9.94 22.83 2.42 19.85 12.30 0.00 9.12 15.20 20.59 8.13 15.05 0.00 9.14 25.70 12.12 3.76 4 451442 Transcript 0 0.00 0.21 3.47 1.39 0.06 5.10 0.95 0.58 3.39 3.11 3.45 0.45 0.00 3.81 0.00 3.85 0.07 1.57 0.40 1.02 0.05 0.95 6.86 5 ER1a ExonRegion 0 5.80 7.96 4.28 4.21 7.71 31.37 8.45 3.61 8.22 3.69 11.70 0.00 0.79 9.52 10.46 9.16 12.21 7.72 16.20 9.17 35.68 12.18 16.60 6 E1_Ab KnownBoundary 1 101.65 108.40 60.49 66.26 116.72 483.81 123.61 63.42 118.72 48.81 136.46 0.00 6.82 95.71 60.82 146.71 131.00 242.05 205.28 125.15 376.53 154.37 286.14 7 ER1b ExonRegion 1 113.52 117.45 79.47 84.62 107.10 461.38 140.11 58.43 94.53 103.68 184.64 1.16 8.01 112.48 146.83 308.05 158.68 191.42 273.75 109.34 309.41 154.05 371.49 8 E1_Ac KnownBoundary 0 19.48 16.64 56.68 52.67 8.66 57.41 24.42 37.46 72.77 82.22 30.22 6.30 0.00 33.43 36.34 25.63 16.83 124.57 20.05 23.52 76.73 18.31 32.86 9 ER1c ExonRegion 1 8.20 19.57 51.77 39.32 10.37 30.60 12.83 36.15 72.90 73.74 103.57 28.68 14.95 43.65 49.50 17.34 69.39 48.97 18.51 50.22 279.14 25.22 14.74 10 E1a_E2a KnownJunction 1 3.41 24.86 72.65 53.84 17.57 47.87 6.27 58.04 114.50 89.64 198.42 47.42 14.28 77.05 50.56 27.86 129.03 50.66 34.17 119.14 512.26 38.39 29.36 11 ER2a ExonRegion 1 14.16 24.80 160.40 134.49 19.44 56.83 16.11 143.90 218.60 211.64 326.46 37.82 55.44 236.70 195.62 142.59 201.04 134.55 213.61 191.29 422.66 198.70 189.80 12 E2a_E3a KnownJunction 1 43.34 78.34 238.79 165.01 61.12 189.10 32.19 177.40 246.58 245.84 197.10 81.63 92.04 288.07 230.05 388.62 152.69 300.70 268.81 220.58 362.32 211.68 371.50 13 ER3a ExonRegion 0 51.49 120.65 193.31 139.25 134.27 598.07 171.33 160.70 237.59 236.79 239.95 84.16 91.58 299.52 193.51 145.76 170.91 218.35 138.48 196.73 404.95 182.99 143.74 14 E3a_E4a KnownJunction 0 74.46 299.55 227.49 169.24 96.52 867.00 308.03 215.23 293.46 285.92 287.60 80.28 78.73 482.02 259.60 98.52 195.70 255.64 209.61 220.90 420.83 204.58 156.90 15 ER4a ExonRegion 0 128.47 199.95 233.12 162.93 120.18 433.90 147.64 194.55 276.05 263.63 312.19 87.47 98.14 414.83 233.66 139.18 232.27 269.53 199.44 194.10 490.74 257.35 173.36 16 E4a_E5a KnownJunction 0 202.33 152.14 270.19 172.07 89.73 320.44 119.81 182.29 260.24 240.12 246.27 164.15 154.86 432.46 292.36 206.53 249.93 322.22 193.32 204.15 472.84 241.93 181.74 17 ER5a ExonRegion 0 112.21 118.63 288.15 217.68 98.68 274.22 98.80 211.79 306.65 248.74 311.03 129.77 122.26 443.66 293.05 222.53 263.90 365.87 252.54 196.73 455.85 278.80 218.09 18 E5a_E6a KnownJunction 0 150.69 160.50 310.60 291.64 186.42 448.78 237.51 266.78 376.10 288.63 402.00 192.81 100.16 460.83 293.96 318.29 342.96 311.73 307.21 243.33 598.75 430.78 285.37 19 ER6a ExonRegion 0 147.32 185.99 284.38 245.92 149.96 472.21 173.23 239.65 340.12 285.47 380.28 183.54 129.20 453.24 292.50 250.92 305.98 290.97 244.62 234.37 507.95 292.17 237.57 20 E6a_E7a KnownJunction 0 147.21 184.11 257.97 225.05 112.39 438.21 165.12 189.72 326.33 283.15 328.50 129.19 73.53 375.19 264.79 216.78 220.48 273.55 214.41 239.69 471.55 260.73 220.32 21 ER7a ExonRegion 1 135.99 187.00 268.66 224.95 149.92 437.54 157.81 186.26 301.52 292.79 376.89 203.58 78.38 409.64 291.41 234.23 231.18 274.63 224.23 204.27 476.46 253.02 223.77 22 E7a_E8a KnownJunction 0 181.22 181.74 274.50 271.06 193.38 476.77 174.93 216.75 294.35 283.31 347.25 183.66 79.22 417.15 289.14 206.70 171.76 282.30 200.19 214.06 427.50 265.39 199.32 23 E7a_E10a KnownJunction 0 10.15 2.76 6.24 4.53 0.00 0.00 0.00 9.94 22.83 2.42 19.85 12.30 0.00 9.12 15.20 20.59 8.13 15.05 0.00 9.14 25.70 12.12 3.76 24 ER8a ExonRegion 0 157.62 190.51 311.12 266.77 170.80 437.85 156.98 213.05 310.46 292.56 337.22 99.42 71.78 417.39 259.83 210.53 236.64 336.19 231.08 210.06 452.87 251.84 203.95 25 E8a_E9a KnownJunction 0 0.00 0.00 0.00 1.30 0.00 5.00 1.90 0.00 1.79 2.50 2.63 0.00 0.00 2.47 0.00 4.36 0.00 1.82 0.00 0.00 0.00 0.00 7.85 26 E8a_E10a KnownJunction 0 321.39 247.06 319.42 261.27 201.61 576.77 207.08 211.16 272.02 289.71 302.60 98.28 67.69 441.11 311.27 240.36 250.49 289.51 278.78 202.94 433.12 303.84 226.47 27 I8_AR1 ActiveIntronRegion 0 42.76 57.99 3.88 6.41 22.40 34.10 9.83 12.32 23.31 23.62 44.46 15.71 13.38 55.13 32.99 14.75 17.30 11.63 9.50 23.64 2.49 25.04 11.96 28 I8_SR1 SilentIntronRegion 0 12.69 17.71 7.43 9.54 15.10 26.55 11.50 17.48 32.54 25.07 42.27 19.74 16.73 59.02 27.25 32.49 30.55 32.42 19.95 27.09 15.10 20.04 20.23 29 I8_AR3 ActiveIntronRegion 0 45.26 20.63 13.77 22.87 33.52 47.56 21.76 22.73 37.64 22.22 42.90 14.36 18.48 50.67 26.57 38.82 22.56 27.18 11.79 22.68 17.61 17.46 20.00 30 ER9a ExonRegion 0 0.00 0.42 6.94 1.48 0.11 5.20 0.00 1.15 4.99 3.73 4.27 0.90 0.00 5.14 0.00 3.34 0.14 1.31 0.80 2.04 0.09 1.91 5.87 31 I9 Intron 0 35.64 14.82 11.53 13.81 15.16 30.28 12.22 10.01 9.54 15.50 19.72 1.73 5.00 33.09 23.10 24.53 17.64 22.46 6.70 16.19 14.27 13.16 18.07 32 I9_AR1 ActiveIntronRegion 0 35.86 14.91 11.60 13.90 15.26 30.48 12.30 10.07 9.59 15.59 19.84 1.74 5.03 33.30 23.24 24.69 17.75 22.60 6.75 16.28 14.36 13.24 18.17 33 E10_Aa NovelBoundary 0 86.90 38.81 28.62 24.24 20.20 37.82 14.26 34.26 35.07 25.73 51.64 6.00 6.82 36.85 29.05 30.93 32.82 40.29 13.08 27.23 26.13 10.84 24.41 34 ER10a ExonRegion 0 288.44 209.49 312.87 269.96 219.70 421.53 180.87 276.98 323.14 288.05 308.00 100.26 103.49 350.72 392.37 238.82 217.56 281.59 207.60 195.52 390.25 242.89 184.63 35 ER10b ExonRegion 0 11.32 5.59 3.06 8.79 17.26 9.72 0.60 6.83 7.84 8.49 2.80 0.00 6.10 0.65 2.61 2.82 3.14 1.85 0.00 5.43 0.00 0.73 0.00