Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 E2F1 Gene 0 12.46 54.84 193.54 52.65 38.96 65.80 101.39 96.79 33.89 130.18 90.26 16.75 15.82 69.79 55.27 87.84 89.61 320.54 102.12 125.01 5.34 14.34 9.75 2 343380 Transcript 0 9.41 128.78 373.98 92.96 99.08 129.40 137.05 199.49 62.17 267.56 137.14 20.10 24.42 98.79 77.31 96.13 148.42 564.97 136.10 273.11 4.24 20.97 9.77 3 402461 Transcript 0 0.00 0.00 3.86 1.66 0.00 3.08 1.79 1.73 0.62 1.15 2.28 0.00 0.00 0.00 0.00 6.17 1.92 5.62 4.78 0.00 0.00 0.00 0.00 4 IG38_SR10 SilentIntergenicRegion 0 2.04 23.71 3.55 4.95 2.60 8.91 6.44 3.75 1.80 5.81 0.94 1.48 0.00 4.92 2.16 8.66 0.00 2.23 9.28 13.43 1.07 6.07 1.43 5 IG38_SR9 SilentIntergenicRegion 0 5.34 11.30 13.83 17.43 35.13 43.53 22.06 15.61 7.90 13.38 2.93 2.57 10.80 7.60 2.37 7.50 0.83 26.46 28.95 11.28 4.45 9.47 6.67 6 IG38_SR8 SilentIntergenicRegion 0 38.59 58.97 16.68 20.23 47.96 32.44 53.67 19.28 7.70 14.82 2.97 0.00 0.00 2.00 1.34 10.75 0.00 12.93 11.52 22.75 3.39 6.09 3.16 7 IG38_AR12 ActiveIntergenicRegion 0 65.02 63.20 36.46 39.84 57.15 60.45 63.46 49.15 28.05 38.23 6.02 9.87 2.45 13.72 7.51 17.04 2.62 42.81 27.87 46.07 14.56 10.68 7.34 8 IG38_AR4 ActiveIntergenicRegion 0 9.38 8.81 14.56 20.19 9.22 13.36 4.95 10.14 11.60 14.81 0.19 2.81 0.76 0.40 1.01 0.88 0.97 17.28 3.14 14.04 3.68 4.92 6.07 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.66 13.65 1.52 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.91 8.41 24.81 3.26 4.12 14.04 8.46 11.47 5.51 24.40 34.26 4.46 3.01 18.82 11.20 28.57 29.84 112.63 50.78 25.21 1.66 1.50 2.22 11 E1a_E2a KnownJunction 0 17.19 58.48 190.89 25.67 20.03 57.69 21.55 69.46 14.18 129.66 65.75 0.00 0.00 44.26 39.19 29.65 83.87 221.73 30.59 96.58 2.78 3.12 8.02 12 E1a_E3a NovelJunction 0 0.00 5.26 4.44 2.03 0.00 0.00 2.25 3.82 1.79 1.02 0.00 0.00 0.00 0.00 4.45 0.00 0.00 20.31 0.00 3.13 0.00 0.00 0.00 13 I1 Intron 0 2.96 6.80 9.61 6.37 12.21 7.96 25.20 12.52 3.34 14.60 16.17 4.21 3.56 16.46 10.86 19.17 17.46 40.03 9.42 20.39 0.75 0.99 1.13 14 I1_SR1 SilentIntronRegion 0 2.96 6.81 9.63 6.38 12.23 7.97 25.25 12.54 3.34 14.63 16.20 4.21 3.56 16.49 10.87 19.21 17.50 40.11 9.44 20.43 0.75 0.99 1.14 15 E2_Aa NovelBoundary 0 9.41 2.83 40.24 4.46 16.89 2.90 51.98 29.04 2.89 18.48 23.16 12.60 0.00 26.43 14.09 32.98 16.64 52.27 7.91 20.96 0.00 8.63 0.00 16 ER2a ExonRegion 1 19.47 76.63 256.17 62.38 43.46 59.43 91.62 115.86 46.16 177.57 152.40 11.13 20.31 107.46 85.70 102.13 152.97 552.78 111.42 182.11 5.74 12.78 10.65 17 E2a_E3a KnownJunction 0 38.15 104.13 428.46 118.13 41.68 105.85 189.24 217.40 74.91 321.00 226.95 42.46 26.78 204.84 100.25 182.69 261.99 920.22 217.70 302.26 15.94 28.29 16.65 18 ER3a ExonRegion 0 28.13 122.65 558.12 145.79 90.16 135.03 213.32 232.15 86.23 346.26 251.58 40.85 40.04 201.40 153.45 214.72 248.68 897.56 206.01 357.99 17.39 38.21 24.01 19 E3a_E4a KnownJunction 0 22.82 165.23 583.48 131.45 149.24 153.49 260.52 271.34 85.59 363.47 197.94 59.27 6.33 109.72 112.00 123.22 192.33 690.82 172.52 251.39 3.15 30.43 15.28 20 ER4a ExonRegion 0 22.62 186.17 564.98 119.88 112.94 177.44 290.81 241.98 94.14 331.65 215.26 35.80 28.69 186.10 163.55 171.47 233.05 612.25 203.53 365.15 10.95 41.10 21.55 21 E4a_E5a KnownJunction 0 13.41 201.28 558.26 134.42 154.07 205.73 221.17 295.12 93.26 396.11 197.84 25.66 40.42 140.44 107.18 139.79 222.44 850.75 192.38 411.43 6.12 33.74 11.69 22 E4b_E5a NovelJunction 0 0.00 12.37 26.61 19.38 8.66 20.95 4.06 18.65 5.90 26.46 28.38 0.00 0.00 7.53 0.00 0.00 9.44 87.92 0.00 26.91 3.15 0.00 4.27 23 E4b_E5b KnownJunction 0 0.00 0.00 1.60 1.96 0.00 2.50 2.25 0.00 0.00 0.00 2.63 0.00 0.00 0.00 0.00 3.42 3.83 3.86 0.00 0.00 0.00 0.00 0.00 24 ER4b ExonRegion 0 0.00 0.00 6.13 1.36 0.00 3.67 1.32 3.46 1.24 2.29 1.93 0.00 0.00 0.00 0.00 8.92 0.00 7.39 9.56 0.00 0.00 0.00 0.00 25 I4 Intron 0 4.73 5.46 7.90 7.87 11.97 6.02 22.90 7.68 3.02 10.96 19.02 4.37 3.00 12.64 12.55 21.27 11.81 18.76 3.80 12.06 0.66 1.55 0.88 26 I4_SR1 SilentIntronRegion 0 4.85 5.59 8.05 8.06 12.26 6.16 23.41 7.87 3.09 11.22 19.46 4.38 3.08 12.90 12.77 21.77 12.10 19.21 3.89 12.35 0.67 1.59 0.90 27 ER5a ExonRegion 0 14.82 185.06 563.67 144.47 143.15 182.46 189.99 303.34 93.25 406.58 213.59 34.64 32.83 155.92 124.75 148.61 222.81 843.50 202.27 406.38 6.61 29.17 17.62 28 ER5b ExonRegion 0 41.21 148.00 674.92 217.19 152.19 201.41 297.36 399.98 125.07 491.76 296.28 65.71 60.51 247.60 215.15 422.07 289.81 1706.50 554.08 457.93 13.75 68.18 43.14 29 E5_Da NovelBoundary 0 0.00 2.76 7.89 3.40 4.33 2.67 24.69 5.01 2.81 9.86 2.58 0.00 15.10 2.47 8.90 7.69 17.39 25.00 0.00 6.52 0.00 0.00 0.00 30 E5a_E6a KnownJunction 0 71.35 206.02 961.00 276.12 270.46 336.23 549.34 580.25 169.76 702.63 511.18 50.57 45.61 358.29 237.10 416.13 422.81 1564.33 605.38 694.65 34.66 59.70 54.46 31 E6_Aa NovelBoundary 0 0.00 0.00 16.62 9.46 0.00 0.00 6.54 17.70 6.63 16.68 17.11 5.40 0.00 16.07 4.45 37.77 13.00 18.65 9.13 12.14 2.66 0.00 0.00 32 ER6a ExonRegion 0 39.16 167.73 578.82 183.48 127.96 215.16 327.60 352.59 113.08 440.56 301.99 59.21 57.07 202.06 158.31 265.73 293.20 759.46 304.85 372.18 20.50 41.90 30.83 33 E6_Da NovelBoundary 0 6.74 22.63 31.02 10.29 17.40 39.64 55.51 31.59 13.43 39.68 38.59 5.55 6.98 42.26 53.77 67.67 34.41 168.72 49.51 130.26 0.00 0.00 3.59 34 E6a_E7a KnownJunction 0 16.37 113.01 384.73 128.46 130.14 227.88 305.96 177.32 67.94 177.85 125.40 19.66 69.15 127.49 109.65 184.65 119.68 482.39 206.97 182.10 11.61 13.53 16.05 35 E7_Aa NovelBoundary 0 6.82 31.38 53.28 10.26 18.76 71.72 100.03 39.88 5.09 45.42 36.38 0.00 0.00 48.68 43.64 43.41 57.13 245.32 59.11 88.78 0.00 3.12 12.29 36 ER7a ExonRegion 0 4.54 12.81 26.42 6.31 6.55 19.52 33.01 10.63 4.07 13.50 6.51 2.97 2.78 8.45 5.50 13.93 7.02 39.65 13.36 11.87 0.39 1.73 1.63