Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	KIAA0406	Gene	0	51.88	96.57	90.87	95.74	91.37	142.58	83.87	80.76	66.88	153.38	147.58	108.77	87.09	177.60	107.89	158.31	178.52	162.06	86.20	123.09	74.23	56.89	54.43
2	373447	Transcript	1	115.24	145.90	19.68	30.45	159.47	323.02	225.98	36.12	39.99	81.61	225.21	22.51	78.57	191.71	70.59	443.26	234.78	288.43	289.23	212.31	125.19	131.59	218.61
3	373448	Transcript	0	5.99	4.41	0.00	2.43	7.77	9.20	11.16	1.32	3.78	3.30	26.88	3.12	4.73	24.27	6.17	25.27	40.80	19.44	12.22	14.09	14.39	11.20	5.97
4	449821	Transcript	0	2.66	4.20	0.60	1.91	4.50	8.70	6.37	1.25	1.29	2.95	7.85	0.46	2.39	7.29	2.22	12.65	9.69	7.04	11.39	6.65	4.36	3.90	6.12
5	487362	Transcript	0	0.00	0.00	0.92	0.00	0.00	0.00	0.00	0.00	0.00	0.51	0.97	0.00	0.00	2.18	0.00	0.00	0.00	2.90	2.40	0.00	0.00	0.00	0.00
6	473288	Transcript	0	3.10	1.23	5.38	1.56	5.54	2.10	1.70	2.96	3.75	2.25	1.86	5.26	0.00	0.58	5.80	0.00	3.18	0.00	5.57	4.48	0.00	1.93	0.00
7	373438	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.53	0.00	0.00	0.00
9	ER1b	ExonRegion	1	59.60	83.41	12.04	19.65	82.24	189.52	124.15	24.05	27.22	58.29	158.29	11.01	59.24	129.82	69.43	277.71	167.77	165.62	161.39	129.34	86.18	79.03	126.64
10	E1a_E2a	KnownJunction	0	14.15	9.80	0.00	5.96	16.21	22.83	24.82	2.34	5.90	2.79	41.54	0.00	0.00	47.21	8.90	56.05	65.92	35.19	21.27	18.41	23.23	24.31	8.11
11	E1a_E3b	KnownJunction	1	230.49	291.79	39.35	60.90	318.93	646.05	451.96	72.25	79.98	163.21	450.43	45.01	157.13	383.43	141.17	886.52	469.56	576.87	578.46	424.09	250.38	263.18	437.23
12	E1a_E4a	NovelJunction	0	18.67	68.54	5.50	11.62	28.69	19.70	60.90	15.65	21.64	16.76	10.37	0.00	0.00	11.42	20.03	19.74	19.07	18.28	14.40	9.20	17.42	3.00	7.77
13	ER2a	ExonRegion	0	3.81	3.44	0.00	1.32	3.86	4.78	8.66	1.62	3.66	4.34	10.74	9.37	14.20	15.78	9.59	16.50	21.88	11.68	7.49	8.98	7.84	6.16	5.79
14	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	3.23	0.00	0.00	0.00	1.77	2.77	28.38	0.00	0.00	9.83	0.00	3.25	34.60	11.44	7.91	14.89	12.11	3.12	4.01
15	ER3a	ExonRegion	0	2.66	4.20	0.60	1.91	4.50	8.70	6.37	1.25	1.29	2.95	7.85	0.46	2.39	7.29	2.22	12.65	9.69	7.04	11.39	6.65	4.36	3.90	6.12
16	E3_Ab	KnownBoundary	0	0.00	0.00	0.00	2.06	0.00	0.00	0.00	0.00	0.00	0.00	2.42	0.00	0.00	3.00	0.00	0.00	8.23	3.90	0.00	0.00	0.00	0.00	0.00
17	ER3b	ExonRegion	1	24.74	46.40	22.33	29.81	49.90	84.87	64.49	45.79	51.17	112.52	182.04	27.27	22.61	102.67	37.29	156.69	199.55	140.02	113.80	139.27	106.61	58.87	70.76
18	E3_Da	KnownBoundary	1	6.15	30.52	43.46	64.76	26.57	52.02	12.98	89.99	69.07	168.96	185.99	75.47	5.84	225.97	105.57	263.44	245.16	291.33	237.09	283.34	138.81	169.43	104.14
19	E3a_E3c	KnownJunction	0	0.00	0.00	1.83	0.00	0.00	0.00	0.00	0.00	0.00	1.02	1.95	0.00	0.00	2.12	0.00	0.00	0.00	5.80	4.80	0.00	0.00	0.00	0.00
20	ER3c	ExonRegion	0	38.67	98.00	47.64	64.71	94.91	142.25	94.02	67.08	66.45	148.10	160.75	160.01	111.13	212.00	61.02	179.19	198.14	169.42	95.82	133.65	73.35	64.28	62.14
21	E3_Ac	KnownBoundary	1	63.94	97.81	46.89	73.68	86.67	154.46	128.78	62.19	73.26	157.55	166.83	117.49	124.02	246.51	65.39	200.03	190.09	201.34	86.21	130.77	115.28	63.38	83.49
22	ER3d	ExonRegion	0	48.27	98.44	71.16	74.86	90.07	169.71	95.70	62.55	67.67	150.35	173.27	143.94	116.65	236.62	88.31	153.15	191.59	202.89	87.96	130.08	92.34	46.93	58.48
23	E3_Db	KnownBoundary	0	40.53	192.53	86.16	102.42	108.40	207.89	113.28	70.24	81.97	163.29	182.15	155.15	79.22	297.84	102.23	194.05	209.72	144.47	79.44	145.35	93.72	39.62	89.89
24	E3b_E3d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER3e	ExonRegion	0	40.64	119.54	71.89	78.40	106.01	157.71	118.45	62.20	65.16	145.45	159.53	169.12	95.22	208.66	85.98	155.52	204.32	134.64	72.18	117.20	66.44	48.86	62.97
26	E3_Ad	KnownBoundary	0	34.23	137.54	85.57	100.75	124.19	154.06	142.12	94.43	73.73	159.64	127.40	160.85	137.00	202.72	83.07	180.89	123.52	166.39	125.37	126.88	77.10	55.54	74.01
27	ER3f	ExonRegion	0	50.76	143.41	96.98	115.64	134.66	181.32	119.96	93.82	75.75	180.14	197.43	174.42	104.35	226.31	120.25	200.68	226.99	201.33	102.60	158.33	80.91	66.26	60.12
28	E3_Dc	KnownBoundary	0	48.23	141.36	123.71	113.94	93.12	154.68	117.96	115.29	83.42	219.17	133.61	144.95	84.25	145.39	117.93	157.91	184.85	253.03	61.18	114.35	60.48	58.78	22.02
29	ER3g	ExonRegion	0	52.71	137.54	104.15	98.47	113.83	192.58	106.27	94.72	61.94	175.69	176.35	86.57	81.16	187.99	126.77	165.56	195.02	185.18	79.86	117.09	88.13	50.54	54.17
30	E3d_E4a	KnownJunction	0	50.75	127.41	103.60	94.09	95.76	147.24	83.29	81.66	55.41	153.65	160.20	56.87	100.81	174.35	111.38	137.06	215.99	161.71	101.93	88.59	123.68	21.49	60.27
31	ER4a	ExonRegion	0	58.74	121.81	156.72	171.48	132.27	187.49	104.44	114.00	75.07	210.36	175.15	100.70	101.38	212.63	152.38	185.72	216.82	185.28	99.79	135.13	93.54	72.57	67.37
32	E4a_E5a	KnownJunction	0	84.90	126.89	173.06	226.88	149.07	154.17	75.12	130.82	79.57	206.22	150.46	117.04	85.71	204.19	145.99	254.98	168.86	245.65	129.32	136.78	79.14	99.14	67.18
33	I4	Intron	0	9.45	14.68	4.43	11.19	12.90	10.61	24.40	14.90	10.65	15.30	3.78	23.93	24.58	11.31	7.79	17.03	21.65	8.73	9.39	19.93	4.37	4.88	4.45
34	I4_AR1	ActiveIntronRegion	0	4.48	21.53	10.31	11.83	8.03	9.38	16.82	10.45	9.10	11.46	5.12	22.52	14.12	8.13	6.41	11.54	11.65	3.57	8.43	17.26	3.88	5.15	3.63
35	I4_SR1	SilentIntronRegion	0	10.33	17.37	1.78	7.93	14.36	10.74	20.35	8.17	8.08	12.09	0.94	20.45	14.34	11.33	5.71	9.43	21.75	6.74	7.00	17.13	2.69	4.07	0.00
36	I4_AR2	ActiveIntronRegion	1	12.68	21.05	4.72	12.97	15.30	9.99	36.48	21.58	11.81	20.20	4.33	28.26	43.53	12.68	10.52	23.80	28.34	10.99	9.15	26.32	5.65	4.42	6.88
37	I4_SR2	SilentIntronRegion	0	9.32	8.53	3.03	11.03	13.13	11.55	21.79	14.66	11.38	14.99	3.80	23.33	20.65	11.79	7.42	17.35	21.75	9.89	10.62	18.41	4.33	5.34	4.56
38	ER5a	ExonRegion	0	73.99	127.19	166.10	198.76	98.14	153.73	91.56	130.93	83.74	215.09	161.22	114.80	77.02	196.35	188.33	186.84	228.76	196.17	86.43	164.53	110.81	82.36	63.94
39	E5a_E7a	KnownJunction	0	85.94	133.13	138.05	161.32	79.71	180.29	79.58	134.52	86.49	197.52	161.30	111.94	146.91	206.84	202.73	183.46	181.11	206.65	56.85	142.92	102.98	93.99	81.44
40	I5	Intron	0	3.06	3.85	16.47	13.87	23.34	7.62	16.91	10.33	7.04	15.99	2.08	4.78	6.03	2.49	2.79	9.37	8.34	10.68	13.24	11.77	3.11	2.78	3.27
41	I5_AR1	ActiveIntronRegion	0	2.88	2.97	16.55	16.78	35.00	7.16	22.15	11.19	9.58	22.35	2.54	5.21	8.16	1.62	3.35	16.93	7.75	12.98	13.18	12.77	4.51	3.40	5.66
42	I5_AR2	ActiveIntronRegion	0	4.39	4.82	15.97	15.96	23.41	8.43	16.49	9.16	8.19	17.23	2.29	4.23	5.40	3.34	3.97	5.29	9.30	11.45	19.83	13.25	3.59	3.09	2.18
43	E6_Aa	NovelBoundary	0	3.78	0.00	13.45	18.71	48.90	22.03	10.47	8.75	3.70	20.76	4.79	13.65	0.00	0.00	4.45	4.36	17.39	8.75	0.00	12.91	5.68	3.00	11.18
44	ER6a	ExonRegion	0	3.10	1.23	5.38	1.56	5.54	2.10	1.70	2.96	3.75	2.25	1.86	5.26	0.00	0.58	5.80	0.00	3.18	0.00	5.57	4.48	0.00	1.93	0.00
45	ER6b	ExonRegion	0	2.78	5.83	16.86	5.91	13.60	3.73	10.66	11.25	7.32	10.78	5.03	16.17	3.05	2.19	1.57	2.01	4.02	1.36	4.80	11.13	0.66	1.91	1.31
46	E6a_E7a	KnownJunction	0	0.00	0.00	18.36	2.90	11.38	0.00	8.39	4.48	1.68	8.06	11.90	0.00	6.82	0.00	4.45	0.00	4.77	0.00	4.80	2.75	3.15	0.00	3.84
47	E7_Aa	NovelBoundary	0	6.89	3.16	13.84	26.64	27.59	7.95	35.02	13.76	4.20	12.22	5.21	6.30	7.30	2.41	4.45	7.86	4.68	19.57	4.52	0.00	9.08	5.08	8.28
48	ER7a	ExonRegion	0	67.34	122.12	170.41	177.99	94.33	188.27	89.94	132.63	87.91	213.97	143.31	102.28	106.57	195.37	211.05	192.22	197.56	223.08	85.28	139.85	96.43	66.39	45.80
49	E7a_E8a	KnownJunction	0	82.98	107.42	139.23	116.70	86.84	164.39	102.59	91.02	73.99	168.42	156.20	72.32	114.77	209.49	147.10	72.72	135.02	143.22	39.06	128.86	76.60	48.86	41.15
50	E7a_E9a	NovelJunction	0	6.45	7.70	6.24	5.43	8.66	2.90	0.00	2.34	0.00	0.00	9.42	0.00	6.82	2.12	10.26	3.50	17.58	8.75	7.34	0.00	0.00	2.33	0.00
51	I7	Intron	0	12.28	24.64	8.37	14.26	21.53	11.17	24.62	8.67	7.49	12.93	8.55	17.12	18.64	13.86	10.32	16.10	21.80	14.76	8.07	17.19	6.71	5.88	5.09
52	I7_AR1	ActiveIntronRegion	0	11.44	17.47	7.09	14.07	24.85	16.77	29.36	9.28	7.90	11.61	8.04	16.73	24.47	16.27	9.37	11.95	24.70	15.67	10.15	18.87	8.86	3.75	2.44
53	I7_SR1	SilentIntronRegion	0	12.55	26.84	8.77	14.34	20.56	9.49	23.23	8.50	7.38	13.35	8.72	17.26	16.92	13.16	10.63	17.38	20.96	14.50	7.45	16.71	6.07	6.53	5.89
54	ER8a	ExonRegion	0	47.28	90.24	163.01	124.22	81.17	179.49	71.87	104.96	84.67	186.47	131.14	62.72	95.17	190.23	171.61	145.46	157.88	193.03	68.04	145.46	81.31	53.80	52.60
55	E8_Da	NovelBoundary	0	24.75	5.92	12.80	10.45	8.23	2.90	22.04	8.75	6.39	8.62	7.42	0.00	0.00	9.30	4.45	3.25	12.34	20.81	4.80	8.82	6.18	2.69	4.35
56	E8a_E9a	KnownJunction	0	74.61	85.77	192.45	148.30	38.12	157.69	60.81	143.51	110.33	240.17	141.61	69.32	84.09	205.07	203.10	124.75	203.74	220.95	64.57	181.46	89.82	70.42	47.89
57	I8	Intron	0	12.08	8.34	3.91	9.42	6.68	7.53	12.04	2.76	4.92	9.45	6.55	3.95	7.87	21.45	13.66	14.84	21.78	18.34	8.52	11.38	7.46	4.09	13.62
58	I8_SR1	SilentIntronRegion	0	12.16	8.39	3.93	9.48	6.73	7.58	12.13	2.78	4.96	9.51	6.59	3.98	7.93	21.60	13.76	14.94	21.93	18.46	8.57	11.46	7.50	4.12	13.71
59	ER9a	ExonRegion	1	94.50	73.23	164.07	121.34	46.34	119.07	59.74	127.61	107.38	188.35	146.40	68.98	130.73	202.06	161.84	146.11	216.55	224.50	80.00	140.11	97.01	56.56	55.10
60	E9_Da	NovelBoundary	0	21.34	6.64	4.52	12.49	3.23	8.63	19.30	5.09	4.51	10.53	15.85	18.76	20.29	24.02	17.80	29.31	31.88	48.46	3.58	45.89	30.09	0.00	0.00
61	E9a_E10a	KnownJunction	1	188.85	90.97	218.89	118.57	80.90	118.91	42.40	118.99	97.37	175.46	116.19	51.32	144.15	172.58	136.97	113.22	186.16	202.62	97.79	99.97	74.81	44.46	21.94
62	I9	Intron	0	8.74	12.58	7.68	14.74	15.66	16.94	22.87	10.01	12.27	17.17	17.53	23.50	26.65	30.26	14.16	29.17	32.06	29.13	16.22	34.37	10.50	9.42	10.74
63	I9_SR1	SilentIntronRegion	0	9.68	10.62	6.35	10.23	12.88	14.66	19.58	9.28	8.59	12.43	16.90	16.92	17.04	29.01	14.50	26.96	31.40	27.69	11.78	30.97	9.93	6.68	11.95
64	I9_AR2	ActiveIntronRegion	0	6.68	7.06	7.23	8.37	8.43	8.80	13.08	4.98	6.19	10.51	12.50	13.21	12.19	27.02	13.40	16.21	25.24	25.05	14.96	26.59	12.06	6.41	8.55
65	I9_SR3	SilentIntronRegion	0	12.45	11.56	6.35	14.85	16.33	14.89	27.17	7.63	11.85	15.86	18.52	23.07	25.73	29.28	16.53	29.26	30.71	25.87	17.72	34.54	10.13	9.12	12.91
66	I9_AR3	ActiveIntronRegion	0	5.93	16.46	7.15	14.87	14.67	19.43	27.86	10.60	14.31	16.32	17.82	32.04	37.37	32.78	14.18	35.00	36.99	36.07	17.39	41.77	11.31	12.12	11.78
67	I9_AR4	ActiveIntronRegion	0	9.47	18.76	11.72	24.85	26.33	28.52	30.62	15.01	19.40	29.71	24.71	33.95	40.74	35.87	16.07	34.84	43.35	35.10	20.30	50.25	11.84	14.57	10.22
68	I9_SR5	SilentIntronRegion	0	10.25	13.04	10.58	13.40	12.52	17.91	19.39	14.12	15.34	25.98	17.72	34.93	33.22	37.74	11.46	37.71	33.11	34.34	14.31	30.51	12.81	10.46	11.84
69	I9	Intron	0	46.68	36.84	51.34	52.79	30.45	38.13	27.41	30.03	23.15	40.11	27.41	18.09	16.26	33.27	30.04	43.97	35.13	47.60	23.03	37.24	13.62	15.25	14.18
70	I9_AR1	ActiveIntronRegion	0	46.71	36.86	51.37	52.82	30.47	38.15	27.42	30.04	23.17	40.13	27.43	18.10	16.27	33.29	30.06	44.00	35.15	47.62	23.04	37.26	13.63	15.26	14.19
71	E10_Aa	NovelBoundary	1	119.28	28.81	77.82	79.11	33.45	37.48	29.06	37.46	30.35	47.81	19.90	12.60	0.00	20.78	88.76	22.90	46.66	49.25	46.31	38.86	10.75	14.45	19.72
72	ER10a	ExonRegion	0	104.96	90.40	161.11	149.40	93.50	139.04	59.72	114.07	88.14	184.94	134.24	60.85	70.60	143.30	193.44	151.93	160.73	156.19	101.58	118.66	67.97	62.37	49.18
73	E10_Da	KnownBoundary	1	12.00	23.02	70.90	107.55	28.69	33.79	22.74	43.74	30.64	79.78	25.01	47.57	61.85	36.97	32.88	20.25	29.36	17.41	22.68	34.90	8.59	16.04	0.00
74	ER10b	ExonRegion	1	23.12	27.00	44.53	60.89	77.35	28.72	36.97	27.34	22.84	44.45	27.12	61.68	39.68	60.52	43.52	23.50	25.24	16.69	15.44	26.94	13.15	11.73	6.87
75	ER10c	ExonRegion	0	2.82	5.69	5.23	7.54	13.20	7.82	7.59	2.54	2.96	2.45	0.52	0.29	0.00	1.30	4.45	2.38	0.44	0.74	0.00	1.13	0.59	1.39	0.20