Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ABHD12 Gene 0 47.07 70.08 100.72 82.71 50.40 130.73 49.04 108.08 81.98 83.09 115.30 66.21 47.81 145.92 151.07 128.47 134.38 176.22 73.48 97.67 96.65 74.64 56.92 2 376542 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 339157 Transcript 0 146.01 102.77 148.82 105.48 99.48 182.96 80.67 150.21 100.56 119.78 183.92 148.80 88.91 223.31 255.42 190.35 180.69 249.45 94.90 119.72 120.07 106.68 58.67 4 461204 Transcript 0 1.40 0.58 1.00 1.24 0.77 2.44 0.76 1.24 0.26 2.27 6.84 5.12 1.09 3.06 3.53 2.83 5.88 5.09 0.45 2.04 0.31 2.87 5.24 5 471287 Transcript 0 0.00 0.00 0.90 0.50 0.00 0.00 0.33 0.63 0.67 2.54 0.24 0.44 0.00 0.49 0.56 0.36 0.81 2.02 0.39 0.78 6.63 0.00 2.51 6 491682 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 450393 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 2.65 0.00 1.24 0.00 0.00 4.33 0.00 0.00 0.00 0.00 3.30 5.44 0.00 2.13 0.00 0.00 2.94 8 376517 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 481556 Transcript 0 1.20 0.96 0.68 2.05 1.26 0.86 2.59 0.72 0.69 1.12 1.81 1.33 0.72 1.68 2.59 2.23 4.32 4.50 0.90 1.20 2.26 0.60 1.10 10 465694 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1b ExonRegion 0 2.40 3.66 0.00 0.66 0.00 16.03 2.35 2.10 0.42 0.21 15.46 0.00 0.00 3.04 2.89 3.55 14.95 2.88 3.47 0.86 8.57 0.00 2.62 13 E1_Ac KnownBoundary 0 0.00 21.38 4.76 2.06 3.48 30.44 5.21 26.08 10.45 12.84 32.59 0.00 0.00 4.24 0.00 23.67 8.51 9.12 11.58 11.95 17.05 0.00 3.50 14 ER1c ExonRegion 0 5.94 24.01 26.64 16.32 6.48 26.52 10.93 33.37 23.56 23.65 48.67 12.16 10.08 61.47 62.23 53.60 82.54 46.59 20.32 45.93 50.43 25.50 29.26 15 E1a_E4a KnownJunction 0 17.11 73.34 101.68 102.15 22.75 136.00 55.87 115.83 81.89 86.12 75.60 15.00 41.88 147.27 182.71 145.69 151.75 274.96 58.64 120.55 92.97 43.78 78.36 16 ER2a ExonRegion 0 0.00 0.00 1.80 0.99 0.00 0.00 0.65 1.26 1.35 2.66 0.47 0.87 0.00 0.98 1.11 0.73 1.61 4.03 0.78 1.56 4.12 0.00 5.02 17 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.14 0.00 0.00 18 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3b ExonRegion 0 0.00 0.11 0.07 0.08 0.00 0.15 0.22 0.14 0.86 0.00 0.00 0.84 0.00 0.27 0.16 0.00 0.46 2.16 0.00 0.24 0.00 0.23 2.77 20 E3_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 2.53 0.00 4.27 21 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E3_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 4.50 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 4.31 0.00 3.20 0.00 0.00 0.00 23 ER3c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 2.65 0.00 1.24 0.00 0.00 4.33 0.00 0.00 0.00 0.00 3.30 5.44 0.00 2.13 0.00 0.00 2.94 24 ER3d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.47 0.00 0.79 0.00 0.00 0.87 0.00 0.00 0.00 0.11 1.68 4.43 0.00 3.17 0.04 0.00 0.05 25 E3b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER4a ExonRegion 0 30.21 118.21 194.44 150.08 109.49 296.17 111.01 218.89 134.75 148.11 224.88 111.80 82.36 268.27 214.74 201.89 221.42 276.42 104.25 191.32 142.13 147.45 90.24 27 E4a_E5a KnownJunction 0 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 2.36 5.16 11.85 0.00 0.00 5.19 0.00 4.30 1.62 0.00 2.36 0.00 2.45 8.54 28 E4a_E6a KnownJunction 0 73.79 173.46 253.07 207.70 137.61 249.35 114.78 297.42 185.85 202.83 298.71 163.10 95.45 355.53 285.06 247.29 284.90 312.89 176.19 200.38 198.06 229.56 134.62 29 ER5a ExonRegion 0 0.42 1.75 1.50 0.59 2.32 1.97 2.29 1.56 0.78 1.68 8.04 3.50 3.28 4.24 5.39 8.50 5.47 8.01 1.35 3.74 0.94 3.04 7.17 30 E5a_E6a KnownJunction 0 3.78 0.00 1.51 1.80 0.00 5.34 0.00 2.18 0.00 2.77 7.32 0.00 0.00 4.94 0.00 0.00 7.85 5.64 0.00 0.00 0.00 3.12 0.00 31 ER6a ExonRegion 0 39.81 111.62 229.10 180.26 88.70 212.44 89.65 243.76 185.45 195.10 323.85 154.92 95.22 351.70 299.43 246.21 294.15 360.01 154.64 271.07 220.93 178.91 134.70 32 E6a_E7a KnownJunction 0 68.09 127.94 225.54 180.40 66.64 179.33 91.11 253.43 195.17 174.71 201.47 163.70 113.30 292.78 264.05 280.35 240.11 357.78 125.65 218.21 231.42 150.45 112.17 33 ER7a ExonRegion 0 47.52 122.32 175.96 143.84 77.11 206.56 78.83 196.90 173.43 176.83 225.71 140.89 132.26 327.80 269.16 286.71 263.80 344.19 147.62 241.72 242.54 168.24 119.52 34 E7a_E8a KnownJunction 0 73.64 121.29 162.18 133.92 96.43 248.55 117.69 128.52 125.11 131.68 155.09 104.88 144.31 284.83 354.66 260.36 190.84 249.09 93.74 223.13 212.88 143.16 125.06 35 E7a_E11a NovelJunction 0 0.00 2.63 0.00 3.30 0.00 0.00 0.00 1.93 2.72 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 21.74 0.00 0.00 0.00 0.00 36 E8a_E9a KnownJunction 0 27.12 178.92 69.19 102.25 75.47 229.30 63.77 117.59 92.19 111.96 145.51 116.14 124.34 331.10 349.59 203.45 283.12 244.82 172.43 178.84 165.50 136.86 92.11 37 ER8a ExonRegion 0 41.51 125.95 130.84 139.15 62.15 210.12 74.57 143.46 129.29 151.02 140.73 102.93 102.12 288.31 294.43 232.02 248.21 288.01 126.49 192.04 184.26 139.33 110.55 38 ER9a ExonRegion 0 51.49 215.07 136.71 149.83 105.34 274.59 97.66 208.77 154.74 167.17 186.65 117.27 136.21 313.81 277.57 267.23 265.22 410.48 146.18 211.15 202.65 125.10 110.89 39 E9a_E11a KnownJunction 0 91.79 261.60 167.41 165.61 131.75 347.58 147.06 228.17 191.64 152.66 180.26 188.76 125.48 309.73 298.78 312.40 280.41 425.77 143.53 260.97 245.57 148.19 133.00 40 ER10a ExonRegion 0 2.40 1.91 1.37 4.10 2.52 1.73 5.19 1.44 1.38 2.23 3.61 2.66 1.44 3.36 5.19 4.45 8.65 7.38 1.80 2.39 4.53 1.20 2.19 41 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 42 ER11a ExonRegion 0 75.34 216.25 179.81 157.48 136.88 350.95 131.62 210.58 171.39 147.40 221.71 127.58 167.68 325.12 312.62 299.80 292.88 427.14 167.29 235.75 260.21 154.61 114.57 43 E11_Da KnownBoundary 1 56.38 227.33 215.75 189.39 150.68 412.09 170.07 224.43 185.79 173.37 214.69 100.53 196.42 337.99 222.14 299.41 277.42 398.70 141.65 257.14 255.20 182.72 114.81 44 ER11b ExonRegion 0 52.87 173.51 178.40 183.55 110.46 338.87 112.01 202.49 165.13 160.72 215.14 162.97 179.28 338.25 284.82 279.27 278.65 446.42 151.09 205.86 237.34 139.75 104.61 45 E11b_E12a KnownJunction 0 77.87 214.90 135.36 182.83 93.29 327.43 117.34 163.80 132.96 137.56 211.63 146.00 134.08 297.49 251.68 317.87 254.42 406.78 149.65 181.97 153.45 96.75 108.07 46 ER12a ExonRegion 0 57.37 187.95 161.43 205.44 68.72 266.43 107.03 210.55 174.51 164.82 170.81 180.81 117.62 352.01 288.98 330.14 212.56 504.92 157.09 161.14 194.33 98.91 112.91 47 E12a_E13a KnownJunction 0 84.98 218.18 189.20 207.03 96.86 306.02 142.12 215.64 184.58 160.39 180.47 134.74 104.86 377.95 313.49 380.50 203.09 407.45 166.31 155.19 213.69 145.67 147.68 48 ER13a ExonRegion 0 84.34 215.03 254.63 213.75 168.24 395.73 151.59 277.03 230.40 209.37 274.25 143.20 128.33 342.06 313.63 325.56 317.01 443.28 204.46 214.55 202.52 187.99 120.84 49 E13a_E14a KnownJunction 0 196.33 231.54 319.77 239.00 287.86 429.41 181.82 316.97 235.27 203.37 323.77 174.36 181.64 376.83 311.64 352.90 302.10 429.37 155.02 283.15 215.66 194.66 163.64 50 ER14a ExonRegion 0 188.83 227.59 280.26 279.82 186.30 439.25 153.63 303.31 251.07 209.54 267.42 166.08 170.14 380.51 325.50 347.31 251.98 485.62 200.64 218.48 188.64 187.47 149.77 51 E14_Da NovelBoundary 0 7.26 8.49 15.79 27.84 22.84 25.21 30.69 7.80 9.37 11.63 2.63 0.00 0.00 9.95 4.45 4.36 8.23 8.46 0.00 0.00 2.84 0.00 4.01 52 E14a_E15a KnownJunction 0 228.63 319.42 303.71 285.71 208.15 492.50 178.46 359.60 286.63 226.42 292.81 293.50 269.46 404.73 395.70 439.97 427.58 495.49 294.88 266.09 236.48 212.85 165.86 53 I14_AR1 ActiveIntronRegion 0 8.00 11.98 9.77 18.80 10.39 7.31 11.87 10.89 10.33 12.09 6.97 14.53 11.13 9.16 10.86 7.98 18.42 10.79 2.02 7.01 3.15 2.99 3.96 54 E15_Aa NovelBoundary 0 25.04 12.63 14.69 18.51 8.23 19.87 9.80 8.79 4.34 13.00 4.63 18.46 6.66 10.01 13.35 24.52 12.62 24.58 8.56 3.26 0.00 3.12 10.84 55 ER15a ExonRegion 0 128.41 206.09 262.21 191.80 114.07 319.38 115.35 266.34 211.02 191.97 239.53 241.63 133.93 329.57 308.89 302.86 298.29 394.18 160.60 224.05 196.58 170.40 102.15 56 E15a_E16a KnownJunction 0 104.61 203.85 285.92 179.36 94.40 303.92 113.19 238.80 196.47 162.38 205.21 188.31 86.52 336.51 265.04 266.43 242.64 350.28 123.39 208.11 184.10 176.84 111.23 57 E15a_E17a NovelJunction 0 7.56 0.00 1.66 0.00 0.00 0.00 1.68 0.00 0.00 1.29 0.00 0.00 0.00 4.94 0.00 0.00 0.00 0.00 0.00 0.00 8.22 5.57 4.35 58 ER16a ExonRegion 0 121.70 177.21 284.70 218.51 135.29 335.91 120.95 276.22 186.11 180.42 236.72 195.40 104.06 291.99 307.17 250.45 259.79 394.34 158.67 213.78 223.47 152.67 128.09 59 E16_Da NovelBoundary 0 20.82 21.11 19.54 29.77 36.25 23.85 16.43 32.69 19.94 29.49 17.53 0.00 13.64 37.73 18.42 41.61 37.96 51.36 23.25 20.39 16.99 23.70 8.28 60 E16a_E17a KnownJunction 0 210.48 154.71 181.19 110.64 155.18 264.51 123.21 182.86 104.86 129.64 213.00 249.53 153.40 284.60 271.46 217.46 173.35 309.66 80.94 136.40 132.14 113.53 47.89 61 E16a_E18a KnownJunction 0 3.19 9.54 64.60 25.24 8.49 38.33 8.26 70.15 55.55 17.70 7.79 6.00 0.00 7.95 0.00 4.36 14.21 32.00 9.60 14.64 21.93 14.21 3.76 62 I16 Intron 0 26.46 16.04 13.83 20.79 15.29 17.02 15.92 22.78 18.12 16.01 22.63 9.86 6.10 35.22 32.74 46.82 30.52 41.15 18.45 19.42 23.25 13.23 8.97 63 I16_AR1 ActiveIntronRegion 1 14.85 8.08 8.94 18.78 11.04 18.03 16.28 22.23 15.62 18.97 25.82 15.00 7.71 38.07 33.02 52.55 31.12 55.41 21.55 17.46 23.75 11.90 13.29 64 I16_SR1 SilentIntronRegion 0 19.52 15.47 11.22 17.94 11.94 15.11 13.17 18.22 16.79 15.19 21.16 9.32 4.36 35.55 30.05 41.11 35.06 41.82 13.87 16.98 23.86 13.12 7.79 65 I16_AR2 ActiveIntronRegion 0 40.71 21.96 19.56 24.84 21.27 18.17 18.27 27.43 21.07 14.84 21.94 6.95 6.65 33.15 35.15 48.40 26.07 31.15 20.66 23.04 22.44 14.27 7.21 66 E17_Aa NovelBoundary 0 64.16 11.64 29.83 30.43 20.46 23.11 21.37 16.92 19.39 18.10 16.79 6.30 0.00 38.20 54.39 30.59 24.40 27.69 12.71 26.85 19.65 13.04 15.62 67 ER17a ExonRegion 0 135.82 101.29 156.74 106.58 86.98 237.13 94.10 164.63 96.17 118.54 185.42 144.25 71.38 244.18 286.05 200.46 206.61 311.60 78.97 133.20 136.50 106.20 95.08 68 E17_Da KnownBoundary 1 112.39 91.30 121.67 111.27 60.95 190.12 78.57 140.97 81.60 117.47 133.82 30.91 21.10 223.20 123.49 161.58 222.81 258.25 48.85 132.12 107.37 88.73 76.91 69 E17a_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 70 ER17b ExonRegion 1 81.53 50.84 116.46 100.31 43.78 101.41 38.12 117.56 96.26 109.92 154.84 48.07 24.41 162.03 239.39 163.23 188.03 189.24 108.86 103.04 108.01 99.83 69.45 71 Ix_AR1 ActiveIntronRegion 0 4.70 2.26 19.61 12.87 16.65 16.71 9.27 30.15 11.25 19.75 9.66 17.32 0.00 12.99 8.70 2.97 13.20 25.05 0.71 15.84 13.22 5.56 24.15 72 ER18a ExonRegion 0 9.92 18.97 39.59 17.08 15.11 35.81 10.85 38.92 28.15 19.25 7.79 7.45 2.21 8.99 17.02 7.07 14.00 34.48 15.76 16.52 23.16 12.56 8.48 73 ER18b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 1.15 0.00 0.00 0.00 3.25 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00