Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C20orf96 Gene 0 57.95 96.80 114.09 80.87 54.11 177.71 68.65 97.63 65.07 64.16 50.43 25.24 20.28 48.22 56.62 43.09 29.13 73.26 94.98 114.58 57.42 30.26 54.08 2 400269 Transcript 0 33.21 22.48 38.18 28.65 17.48 61.20 22.32 27.63 16.68 20.63 17.76 7.87 6.08 21.54 25.13 21.58 10.30 35.66 26.37 29.53 16.92 6.02 17.37 3 360321 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 382369 Transcript 1 49.67 30.66 70.69 32.95 37.88 101.63 54.98 30.37 23.70 28.64 29.78 1.65 0.80 15.85 25.92 31.08 32.23 32.73 80.78 74.41 25.74 14.18 38.36 5 ER1a ExonRegion 0 1.41 1.30 0.03 0.05 2.57 5.91 0.85 0.00 1.86 1.45 4.39 0.00 0.00 2.15 1.31 3.20 2.12 0.01 8.17 0.00 9.09 2.00 5.65 6 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 4.10 0.00 0.00 0.00 0.00 14.21 0.00 0.00 7 E2_Aa NovelBoundary 0 13.78 14.54 19.43 4.86 6.79 81.09 26.10 0.00 2.66 1.10 4.74 0.00 0.00 4.83 4.45 11.36 3.83 4.06 14.40 9.01 0.00 2.39 20.91 8 ER2a ExonRegion 1 87.19 55.47 80.77 47.08 75.77 188.73 102.58 48.21 34.67 36.52 36.91 3.31 1.60 26.75 51.85 51.06 30.70 52.70 131.64 92.89 37.95 28.36 69.12 9 E2_Ab KnownBoundary 0 27.63 14.14 62.77 28.90 3.65 16.30 5.79 35.04 24.59 16.76 16.11 0.00 6.17 10.12 6.30 12.99 7.29 16.37 22.31 47.49 13.84 9.37 8.02 10 ER2b ExonRegion 1 15.79 9.83 86.95 42.33 5.57 25.60 13.96 36.62 37.23 38.52 75.26 12.09 0.59 16.71 13.30 21.24 40.30 27.79 36.43 86.92 71.85 16.41 21.54 11 E2a_E3a KnownJunction 1 6.37 6.64 94.50 52.24 3.74 21.86 3.80 45.14 44.76 55.12 75.65 6.30 0.00 14.54 22.99 26.06 32.82 37.27 38.31 99.84 89.21 19.47 22.45 12 E2a_E4a KnownJunction 0 12.15 5.85 60.61 18.81 0.00 14.54 7.38 12.53 12.73 20.76 22.64 0.00 0.00 4.94 0.00 11.11 33.75 12.77 29.93 55.93 13.53 0.00 7.60 13 ER3a ExonRegion 0 10.67 12.58 97.39 69.87 19.64 70.15 13.99 67.61 57.73 46.58 43.62 20.00 7.67 38.44 55.42 51.00 25.34 57.84 150.20 98.58 53.23 37.96 81.03 14 E3_Da NovelBoundary 0 0.00 0.00 4.97 4.06 4.07 2.90 8.39 6.98 1.79 3.22 4.32 0.00 12.17 2.47 0.00 16.58 0.00 2.03 3.58 5.75 9.20 0.00 0.00 15 E3a_E4a KnownJunction 0 31.26 10.26 95.30 66.33 114.60 136.40 42.35 56.35 53.56 40.99 47.22 18.01 6.82 29.08 33.75 32.38 8.13 51.86 76.52 101.12 60.73 29.94 30.39 16 E4_Aa NovelBoundary 0 0.00 3.35 7.45 0.00 0.00 2.90 4.50 4.03 2.69 1.56 6.58 0.00 0.00 0.00 0.00 3.67 0.00 7.21 9.22 6.46 22.92 3.12 8.71 17 ER4a ExonRegion 0 42.74 57.76 157.18 97.05 108.51 226.08 109.17 79.00 61.48 63.51 58.39 23.21 16.40 42.66 55.34 48.90 30.04 85.26 99.66 146.97 61.20 28.14 50.52 18 E4a_E5a KnownJunction 0 72.83 65.51 140.03 109.68 64.26 94.43 52.55 99.77 60.53 55.90 54.49 26.11 12.99 37.02 44.87 25.29 22.53 80.63 60.43 170.72 53.44 17.33 51.47 19 ER5a ExonRegion 0 70.96 97.84 137.94 93.76 55.11 180.95 87.53 92.03 74.56 72.72 37.00 13.53 18.67 58.52 58.37 41.67 27.11 90.10 80.11 156.16 73.42 36.66 56.18 20 E5a_E6a KnownJunction 0 75.49 129.32 143.82 108.41 58.32 195.74 86.56 108.68 86.08 93.16 42.80 7.05 12.50 76.87 73.92 58.02 26.18 97.50 100.99 191.88 45.41 50.15 60.69 21 ER6a ExonRegion 0 81.82 134.95 175.20 122.24 96.84 305.16 116.52 150.51 116.95 100.24 68.75 29.48 26.22 77.91 76.97 59.15 35.12 133.06 128.72 190.21 73.60 58.15 62.55 22 E6a_E7a KnownJunction 0 86.90 185.69 215.93 155.23 101.61 457.52 145.60 209.81 116.72 131.25 101.08 69.17 54.70 100.95 74.79 78.70 45.54 159.47 162.73 210.48 89.89 66.50 96.03 23 ER7a ExonRegion 0 82.02 228.74 212.64 145.22 75.02 321.81 107.87 192.02 124.36 121.53 97.61 61.43 31.32 91.44 86.63 73.89 47.88 140.86 148.66 197.44 100.84 63.16 83.17 24 E7a_E8a KnownJunction 0 125.50 241.40 257.03 150.20 97.45 258.49 100.16 234.74 150.90 116.93 73.76 44.71 40.91 90.24 88.76 47.59 58.25 114.74 113.60 160.69 92.85 51.07 66.58 25 ER8a ExonRegion 0 105.81 204.65 224.36 144.41 106.53 335.21 120.30 211.36 135.18 126.96 100.42 76.91 50.53 100.19 85.79 84.41 58.28 147.10 157.74 209.34 109.39 55.76 116.34 26 E8_Da KnownBoundary 0 5.93 9.34 51.09 43.75 12.14 50.60 44.74 24.19 26.88 20.82 5.05 18.91 12.34 12.77 11.74 4.36 14.21 35.77 7.62 13.36 5.44 13.90 7.94 27 E8a_E8b KnownJunction 0 83.27 305.80 214.87 106.05 76.74 316.35 95.44 182.62 117.71 120.48 83.49 57.62 48.37 79.58 66.26 73.06 38.24 120.01 182.50 191.94 82.84 49.60 104.57 28 ER8b ExonRegion 0 33.21 22.48 38.18 28.65 17.48 61.20 22.32 27.63 16.68 20.63 17.76 7.87 6.08 21.54 25.13 21.58 10.30 35.66 26.37 29.53 16.92 6.02 17.37 29 E8_Ab KnownBoundary 0 43.12 38.81 42.96 34.39 25.55 125.84 42.71 46.09 20.63 27.18 21.43 6.15 0.00 46.68 25.22 41.27 23.09 35.82 34.26 32.21 25.33 10.72 22.54 30 ER8c ExonRegion 0 72.30 223.44 201.86 127.83 101.98 464.30 157.85 194.60 123.47 111.14 71.55 55.53 45.19 96.06 83.58 58.69 51.87 120.13 145.87 193.08 113.89 55.03 79.52 31 E8_Db NovelBoundary 0 100.39 213.78 208.77 145.07 143.97 450.25 183.94 172.59 119.10 85.13 67.75 25.96 47.07 88.47 76.27 44.18 44.13 99.32 149.37 165.23 108.91 43.97 60.27 32 E8_Dc NovelBoundary 0 56.38 55.98 90.48 71.45 44.06 143.16 72.96 77.51 51.65 62.37 59.44 39.76 61.68 85.59 74.05 54.17 45.91 82.20 66.73 73.50 81.61 14.45 32.69 33 E8c_E9a KnownJunction 0 13.48 199.90 89.38 95.93 43.38 215.84 112.92 147.95 75.72 56.01 41.01 0.00 0.00 15.01 16.07 12.48 22.44 41.99 86.97 58.29 39.60 5.82 28.26 34 ER8d ExonRegion 0 27.15 192.13 132.07 101.39 78.06 309.91 132.28 149.55 94.24 68.02 45.13 11.48 28.14 46.75 45.92 30.11 29.42 71.18 115.23 95.84 66.11 18.21 45.20 35 I8 Intron 0 72.32 61.98 155.12 106.66 71.32 232.69 81.18 95.84 81.51 88.77 58.64 48.90 72.68 81.46 82.11 80.08 45.78 94.64 137.84 134.49 66.52 46.95 81.24 36 I8_AR1 ActiveIntronRegion 0 70.14 63.43 165.98 113.38 72.25 243.46 81.43 105.53 90.19 97.48 65.65 53.79 76.92 87.10 87.86 89.25 51.30 101.35 150.52 145.44 71.84 51.51 87.63 37 I8_SR1 SilentIntronRegion 0 98.70 66.93 130.51 92.63 80.08 224.53 94.94 66.58 54.62 62.60 34.49 33.00 66.15 68.16 67.14 52.53 26.35 79.34 102.80 106.14 54.82 33.59 65.79 38 E9_Aa NovelBoundary 1 44.30 47.36 143.19 114.67 116.72 199.54 85.37 78.20 59.32 52.14 56.44 38.26 33.28 56.33 10.26 78.95 34.22 52.27 82.54 78.36 52.08 14.63 16.39 39 I8_AR2 ActiveIntronRegion 1 4.50 9.41 28.69 23.79 13.94 36.98 16.55 14.12 11.12 14.86 12.97 13.17 9.58 18.41 24.18 1.36 11.83 16.78 16.59 22.16 2.02 6.68 10.65 40 ER9a ExonRegion 0 76.05 187.72 181.35 159.43 91.04 293.42 108.25 187.05 109.06 109.92 79.70 51.99 59.47 81.86 106.40 71.43 38.89 124.22 172.04 168.66 91.28 44.96 95.50 41 E9_Da NovelBoundary 0 3.78 13.88 5.12 3.56 0.00 14.14 5.96 6.98 15.71 2.93 0.00 0.00 6.17 15.25 8.90 12.30 16.27 8.95 4.33 25.31 8.40 3.06 16.48 42 E9a_E10a KnownJunction 0 96.39 250.28 238.52 224.65 77.59 222.49 103.30 259.83 127.14 154.91 108.82 68.42 46.59 112.84 140.92 71.61 36.37 126.23 199.91 146.50 111.20 75.81 133.08 43 ER10a ExonRegion 0 66.32 83.15 70.25 59.21 30.56 109.71 37.67 80.28 44.35 51.84 40.78 17.21 18.26 33.36 55.49 27.81 24.67 41.45 64.38 80.99 37.68 15.70 34.98