Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HSPA12B Gene 0 18.50 0.76 41.88 18.95 11.13 21.64 7.14 25.81 14.93 6.22 0.78 0.23 0.38 8.06 9.55 0.34 0.53 2.85 4.33 3.27 51.35 23.07 35.93 2 254963 Transcript 0 3.56 0.01 15.84 3.21 1.86 2.02 0.16 8.82 2.44 0.73 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.41 0.00 33.05 20.06 25.91 3 399705 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 399701 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 4.97 0.05 0.11 0.00 0.68 2.00 0.55 0.44 0.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.97 11.05 16.53 6 E1_Ab KnownBoundary 0 3.78 0.00 0.00 0.00 0.00 2.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 5.39 0.00 7 E1_Ac KnownBoundary 0 12.89 0.00 1.24 4.46 0.00 2.38 2.21 3.49 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.65 17.57 59.41 8 ER1b ExonRegion 0 12.70 2.03 3.68 0.00 2.68 3.67 1.32 1.73 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.22 23.96 52.86 9 ER1c ExonRegion 0 14.97 1.18 7.00 0.00 3.77 2.45 1.24 1.31 0.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.82 14.21 26.78 10 E1a_E2a KnownJunction 0 10.22 0.00 5.94 0.00 12.99 2.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.24 8.39 16.39 11 ER2a ExonRegion 0 4.59 0.00 7.23 0.00 3.30 1.28 0.09 1.84 0.62 0.00 0.00 0.00 0.00 0.00 1.64 0.00 0.00 0.00 0.00 0.00 25.75 9.86 8.86 12 E2a_E3a KnownJunction 0 3.11 0.00 10.17 0.00 0.00 0.00 0.00 6.45 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37.38 20.02 8.11 13 E2a_E4a KnownJunction 0 0.00 0.00 5.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER3a ExonRegion 0 2.66 0.00 23.91 4.12 3.11 0.84 0.07 12.56 4.93 1.53 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.00 1.66 0.00 37.96 27.36 58.94 15 E3a_E4a KnownJunction 0 3.48 0.00 29.18 8.72 3.65 5.22 0.00 15.81 2.55 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51.89 21.80 20.06 16 ER4a ExonRegion 0 3.52 0.00 34.54 7.87 3.17 11.79 4.63 16.91 10.37 2.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.14 15.73 18.23 17 E4a_E5a KnownJunction 0 13.34 0.00 48.17 13.92 12.73 11.87 4.11 18.85 16.93 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.52 11.88 27.40 18 ER5a ExonRegion 0 15.45 0.55 46.07 10.98 4.16 3.41 3.19 15.57 14.82 6.66 0.00 0.00 0.00 0.00 0.79 0.00 0.00 0.02 0.56 0.58 65.27 21.44 30.15 19 E5a_E6a KnownJunction 0 3.78 0.00 61.53 8.96 3.31 11.58 13.03 11.01 18.06 9.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.61 0.00 80.80 20.15 52.41 20 ER6a ExonRegion 0 5.40 0.00 44.11 10.89 4.64 9.62 5.69 16.77 13.67 8.32 0.00 0.00 0.00 0.65 0.99 0.00 0.00 1.30 1.40 0.97 66.34 20.28 43.60 21 E6_Da NovelBoundary 0 0.00 0.00 13.07 3.83 3.65 0.00 2.12 2.38 8.74 3.20 0.00 0.00 0.00 0.00 4.45 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 22 E6a_E7a KnownJunction 0 14.37 0.00 39.68 17.38 7.30 15.67 3.53 9.57 10.47 7.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.42 0.00 83.40 19.23 54.63 23 ER7a ExonRegion 0 13.57 0.97 39.61 11.22 7.91 8.23 4.56 13.24 10.71 5.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.79 0.49 68.16 25.34 35.09 24 E7_Da NovelBoundary 0 3.56 0.00 13.16 2.06 4.24 0.00 2.21 1.93 2.89 2.87 2.58 0.00 0.00 2.47 10.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E7a_E8a KnownJunction 0 30.01 0.00 41.10 12.02 16.47 2.90 4.15 13.31 9.69 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 55.78 21.92 36.02 26 ER8a ExonRegion 0 9.11 0.53 29.98 9.80 2.97 7.34 2.89 8.34 6.30 2.33 0.56 0.00 0.00 0.00 0.00 0.00 0.96 1.34 0.93 1.57 51.01 18.95 33.78 27 E8a_E9a KnownJunction 0 3.04 0.00 28.77 4.66 0.00 7.95 1.94 8.95 12.18 3.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63.26 28.11 7.34 28 ER9a ExonRegion 0 12.97 0.00 18.85 10.68 0.95 5.37 3.74 6.00 8.33 0.69 1.13 0.00 0.00 0.00 0.00 1.74 0.00 0.00 3.73 0.00 62.49 17.53 30.31 29 E9a_E10a KnownJunction 0 6.22 0.00 25.04 12.62 8.32 11.41 8.13 2.18 10.76 2.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.69 22.47 54.29 30 ER10a ExonRegion 0 7.38 0.00 30.27 11.59 2.75 10.90 5.01 12.72 16.93 2.91 0.00 0.00 0.00 0.00 1.99 0.00 0.00 1.34 0.00 1.03 56.83 20.12 32.30 31 E10a_E11a KnownJunction 0 14.22 0.00 35.87 20.24 11.88 2.90 2.25 19.51 16.38 2.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72.03 36.25 27.06 32 ER11a ExonRegion 0 12.09 0.40 57.54 20.36 11.29 44.64 10.42 16.30 17.22 6.39 0.00 0.00 0.00 0.83 0.40 0.00 0.00 1.45 1.97 1.81 60.75 26.82 44.12 33 E11a_E12a KnownJunction 0 19.48 0.00 72.94 25.90 12.05 31.06 4.42 12.77 17.77 7.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.53 3.00 57.70 21.62 79.73 34 ER12a ExonRegion 0 20.86 0.00 66.68 28.06 20.43 24.99 9.56 13.35 25.78 3.42 0.95 0.00 0.00 0.69 1.42 0.00 0.00 0.00 7.66 4.66 57.08 31.65 49.16 35 E12_Da NovelBoundary 0 18.60 0.00 40.33 10.32 8.66 52.19 4.20 4.64 7.38 5.94 0.00 0.00 0.00 2.47 0.00 0.00 0.00 2.16 7.91 3.26 14.83 6.12 46.27 36 E12a_E13a KnownJunction 0 12.97 0.00 57.89 13.29 8.32 16.58 0.00 10.43 20.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 35.52 15.92 38.75 37 I12 Intron 0 6.42 0.54 9.87 5.62 1.41 19.57 6.46 5.77 5.58 4.50 0.51 0.94 0.00 1.89 2.92 0.39 0.87 2.06 1.26 2.80 8.42 4.40 10.06 38 I12_SR1 SilentIntronRegion 0 4.46 0.00 1.23 0.88 2.10 35.37 5.91 2.22 0.35 0.00 0.00 0.00 0.00 0.00 0.21 0.00 0.00 0.00 1.71 2.36 9.13 5.43 2.83 39 I12_AR1 ActiveIntronRegion 0 7.11 0.64 11.49 6.46 1.50 20.15 7.10 6.56 6.51 5.32 0.61 1.12 0.00 2.10 3.46 0.47 1.04 2.42 1.35 3.04 9.21 4.78 11.40 40 E13_Aa NovelBoundary 0 18.30 0.00 9.37 5.83 0.00 0.00 7.99 9.53 8.48 3.04 0.00 0.00 0.00 7.24 8.90 0.00 0.00 1.82 22.49 2.88 5.75 9.06 0.00 41 ER13a ExonRegion 0 26.23 1.17 46.53 26.09 16.05 29.10 9.36 39.09 18.06 8.49 1.35 0.45 0.74 15.65 18.29 0.57 0.95 5.06 6.79 5.44 50.21 24.64 36.73 42 IG18 Intergenic 0 1.91 0.79 10.35 9.94 3.10 14.88 5.46 25.21 9.24 2.42 1.49 0.00 0.00 17.84 11.56 0.77 1.28 3.90 4.92 4.66 4.82 2.41 4.16 43 IG18_SR1 SilentIntergenicRegion 0 2.00 0.82 10.73 10.28 3.24 15.28 5.48 26.27 9.62 2.54 1.52 0.00 0.00 18.34 12.11 0.80 1.27 4.03 5.16 4.80 4.98 2.53 4.36