Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MCM8 Gene 0 64.19 82.68 65.56 67.24 128.14 89.94 175.19 84.92 30.31 149.94 208.29 275.65 117.13 218.82 108.91 163.95 215.62 108.13 66.06 133.51 20.09 34.83 27.43 2 378883 Transcript 1 3.63 0.00 3.19 1.76 0.00 22.83 10.64 6.65 0.00 2.74 8.05 50.72 0.00 0.00 0.00 7.95 4.39 5.14 4.61 5.94 0.00 3.12 8.62 3 399350 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 378886 Transcript 0 9.87 11.52 3.57 2.39 7.42 13.72 10.09 2.69 0.62 6.01 21.17 17.95 20.90 22.72 25.28 17.86 24.12 6.55 9.64 7.43 3.79 3.48 2.31 5 378896 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 265187 Transcript 1 3.03 5.77 9.62 4.36 25.86 26.78 47.44 9.30 5.66 24.68 31.51 77.03 5.04 35.14 19.34 17.30 51.64 22.47 20.31 26.73 2.28 9.21 0.00 7 ER1a ExonRegion 1 4.24 2.22 4.43 0.74 5.35 21.32 16.51 3.35 3.85 7.90 82.12 3.49 1.62 41.35 2.24 16.30 140.31 30.75 13.29 13.67 35.10 0.38 3.16 8 E1_Ab KnownBoundary 0 0.00 0.00 1.74 0.00 16.64 5.62 22.57 4.56 7.38 7.31 25.37 12.60 12.66 6.83 0.00 36.40 29.17 52.69 13.08 6.14 3.15 0.00 3.16 9 ER1b ExonRegion 1 23.47 33.27 18.07 13.23 60.87 98.47 94.94 45.45 18.51 63.80 66.66 8.71 8.62 46.22 17.94 140.98 87.72 114.44 40.23 88.51 10.78 10.39 26.65 10 E1_Da KnownBoundary 0 6.67 3.35 6.42 4.89 16.38 25.33 31.09 0.00 5.76 9.78 12.27 18.46 0.00 6.89 0.00 4.02 16.27 19.69 22.31 6.01 0.00 0.00 0.00 11 E1a_E2a KnownJunction 0 11.26 2.57 6.77 6.09 22.67 90.40 51.76 23.54 5.58 17.86 29.64 6.00 0.00 16.54 8.90 37.60 72.93 17.70 9.04 10.99 2.90 5.82 8.28 12 ER1c ExonRegion 1 2.27 2.60 7.47 3.74 19.03 31.58 50.53 5.99 5.01 15.76 22.69 57.73 3.91 25.96 14.83 11.45 35.39 20.36 26.78 15.68 1.59 4.71 0.00 13 E1b_E2a KnownJunction 1 3.78 8.95 11.77 4.99 32.68 21.98 44.34 12.61 6.31 33.60 40.33 96.33 6.17 44.32 23.86 23.16 67.88 24.58 13.84 37.78 2.97 13.72 0.00 14 ER2a ExonRegion 0 8.77 22.53 31.27 28.39 38.21 60.96 81.53 56.89 18.07 106.89 197.43 132.26 72.86 134.89 53.11 129.86 225.13 99.74 48.93 129.34 19.19 21.73 19.50 15 E2a_E3a KnownJunction 0 20.00 46.57 49.85 43.12 119.44 137.48 192.37 110.74 30.67 169.47 280.86 200.77 73.05 169.11 87.15 275.83 299.67 139.16 76.14 152.76 25.45 38.09 63.94 16 ER3a ExonRegion 0 13.97 38.17 35.92 38.07 83.97 65.25 137.97 65.19 21.43 131.07 225.30 214.33 90.90 182.23 60.51 118.29 227.13 76.48 36.04 129.99 17.46 32.54 22.18 17 E3a_E4a KnownJunction 0 27.71 59.86 47.13 49.14 84.13 89.95 178.33 81.16 16.23 143.74 237.43 276.39 174.50 195.66 64.78 117.15 162.60 77.81 61.55 126.17 10.69 29.82 14.85 18 ER4a ExonRegion 0 28.43 74.68 40.69 51.38 104.58 63.45 169.93 62.00 26.44 129.88 219.33 426.69 164.66 217.48 69.42 147.53 177.85 75.29 47.44 139.04 7.57 31.86 23.71 19 E4a_E5a KnownJunction 1 39.56 48.54 39.50 60.80 113.67 106.93 190.39 61.61 38.54 127.11 182.41 453.00 169.63 258.29 74.79 151.67 175.41 46.10 45.46 143.37 0.00 39.37 23.99 20 ER5a ExonRegion 0 28.59 86.25 37.16 56.33 101.61 72.33 164.91 59.82 36.06 136.67 231.48 388.41 151.33 235.45 59.80 169.53 233.20 85.67 47.10 168.98 12.25 33.74 23.61 21 E5a_E6a KnownJunction 0 16.74 82.68 50.91 73.22 128.27 63.32 214.45 46.17 47.19 147.82 249.33 430.04 172.39 238.69 71.95 181.75 216.18 99.90 48.10 175.39 33.79 47.15 27.06 22 ER6a ExonRegion 0 20.96 71.04 42.50 51.06 99.62 64.41 180.02 53.15 34.08 125.67 259.49 427.87 112.61 231.28 81.12 174.16 253.63 134.67 54.70 183.02 24.05 26.42 45.43 23 E6_Da NovelBoundary 0 9.63 34.73 9.61 42.88 89.22 37.42 80.55 31.71 25.58 41.07 52.12 87.93 61.68 89.23 34.37 48.36 52.36 10.69 0.00 32.09 0.00 7.29 3.33 24 E6a_E7a KnownJunction 0 10.08 41.24 30.51 31.56 54.07 16.24 154.30 29.78 18.49 90.95 194.42 300.10 72.56 170.41 52.91 167.73 205.80 140.32 49.98 183.51 14.89 28.29 32.01 25 I6 Intron 0 13.06 19.93 10.76 22.97 38.88 28.16 56.53 25.95 8.58 28.35 34.85 84.91 40.17 58.56 19.17 28.93 30.77 8.14 4.59 21.29 0.91 6.28 4.63 26 I6_SR1 SilentIntronRegion 0 13.10 20.01 10.81 23.05 39.04 28.27 56.76 26.06 8.61 28.46 34.98 85.26 40.34 58.78 19.25 29.05 30.90 8.17 4.60 21.38 0.91 6.31 4.65 27 E7_Aa NovelBoundary 0 26.23 30.59 29.36 50.64 77.33 69.62 115.75 43.42 22.48 49.64 48.43 116.74 60.87 44.68 41.78 44.35 70.50 4.10 12.89 70.50 2.47 4.78 7.77 28 ER7a ExonRegion 0 50.96 91.53 53.97 69.06 134.08 87.62 209.01 67.23 35.69 151.11 257.82 346.49 80.32 264.90 87.93 188.98 257.57 150.46 69.66 200.53 27.06 33.16 41.11 29 E7a_E8a KnownJunction 1 63.79 91.10 57.18 66.56 112.22 136.46 163.49 72.91 32.35 159.05 260.54 465.75 81.65 249.22 88.88 227.46 209.07 168.38 53.27 203.70 35.89 48.37 41.91 30 E7a_E9a NovelJunction 0 3.19 2.96 4.23 5.46 4.24 7.27 9.72 7.72 1.48 7.20 25.11 12.60 0.00 19.54 0.00 11.45 10.94 3.81 0.00 0.00 0.00 2.82 0.00 31 ER8a ExonRegion 1 38.56 68.17 61.44 66.56 94.30 89.83 151.18 67.61 31.27 153.63 190.21 313.28 40.14 254.46 83.16 167.27 245.38 153.94 77.15 177.78 33.82 25.49 28.96 32 E8a_E9a KnownJunction 1 73.12 77.22 58.37 82.14 160.44 67.18 216.31 75.49 32.96 142.40 122.87 308.50 27.92 271.94 87.64 145.26 251.80 92.03 87.63 195.46 33.85 28.66 43.96 33 ER9a ExonRegion 0 50.85 67.39 44.97 50.05 116.43 77.83 150.03 68.09 27.35 112.00 192.86 246.64 53.01 224.04 76.46 136.37 226.29 104.91 54.51 143.39 25.60 26.74 25.44 34 E9a_E10a KnownJunction 0 59.20 98.80 68.06 79.08 156.11 145.48 257.20 91.02 37.73 170.01 253.96 314.50 81.00 221.91 102.85 144.66 248.53 91.65 79.16 153.21 17.24 34.35 39.69 35 E9a_E10b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.18 1.79 1.16 2.63 5.70 0.00 0.00 6.30 0.00 0.00 3.90 0.00 3.26 0.00 0.00 0.00 36 ER10a ExonRegion 1 56.15 106.95 60.47 73.26 142.52 160.81 267.12 82.54 39.07 165.88 294.12 354.84 70.92 232.48 103.85 153.46 288.93 86.96 75.15 165.57 18.57 37.42 39.43 37 E10_Ab KnownBoundary 0 83.94 129.98 63.63 87.33 177.76 223.68 397.46 73.85 37.35 179.28 279.28 356.07 92.69 259.35 99.64 135.35 262.74 82.74 75.20 193.61 10.81 46.29 29.62 38 ER10b ExonRegion 0 63.34 93.67 87.18 92.80 138.61 140.54 225.55 112.90 43.48 188.15 261.43 452.74 113.04 235.76 108.04 204.33 252.26 142.75 88.22 189.26 15.01 40.78 27.01 39 E10_Da NovelBoundary 0 6.82 8.49 10.20 21.48 0.00 9.48 22.83 0.00 2.78 15.47 17.37 34.51 0.00 7.12 14.09 0.00 38.71 0.00 13.08 17.13 0.00 2.69 0.00 40 E10a_E11a KnownJunction 0 49.19 68.94 74.15 68.66 120.20 106.47 222.27 74.14 35.94 134.09 184.20 423.44 165.25 200.95 105.45 179.44 227.86 117.23 94.50 129.69 11.06 22.47 16.05 41 E10a_E12a KnownJunction 0 0.00 3.35 0.00 1.56 0.00 17.04 8.35 0.00 0.00 3.04 21.06 11.25 6.82 10.24 13.72 12.90 8.32 0.00 0.00 5.31 2.41 3.12 0.00 42 E10a_E13a NovelJunction 0 6.96 0.00 3.08 1.73 12.99 4.43 3.93 9.78 0.00 17.89 23.95 31.66 0.00 7.00 10.01 10.60 8.98 2.57 0.00 6.01 3.15 3.12 0.00 43 E10a_E14a NovelJunction 0 0.00 5.99 0.00 2.06 3.14 2.16 1.77 6.61 1.74 1.10 16.48 12.60 0.00 26.96 0.00 6.66 23.28 1.95 0.00 0.00 0.00 0.00 3.93 44 E11a_E13a KnownJunction 1 56.08 46.70 50.44 49.71 100.42 115.73 144.90 76.27 13.48 153.01 149.83 422.54 109.57 164.58 57.61 131.67 193.45 95.67 51.30 144.77 16.62 12.12 23.30 45 E11a_E14a KnownJunction 1 3.63 0.00 3.19 1.76 0.00 22.83 10.64 6.65 0.00 2.74 8.05 50.72 0.00 0.00 0.00 7.95 4.39 5.14 4.61 5.94 0.00 3.12 8.62 46 ER11a ExonRegion 1 44.17 55.23 70.95 73.11 107.72 121.09 172.37 97.41 30.20 182.02 182.32 438.95 113.77 183.89 85.45 165.77 231.38 140.55 69.46 137.41 18.55 19.02 29.08 47 I11 Intron 0 15.49 12.41 1.78 4.46 10.45 6.71 37.48 3.14 0.00 5.84 6.60 17.53 11.24 17.76 10.33 16.68 9.67 2.70 2.33 5.71 0.54 2.03 0.72 48 I11_AR1 ActiveIntronRegion 0 14.02 16.16 2.42 6.05 9.75 4.86 28.06 4.27 0.00 7.92 7.04 22.60 12.43 20.49 12.09 14.76 8.75 3.65 2.11 7.05 0.73 2.07 0.97 49 I11_SR1 SilentIntronRegion 0 19.99 1.92 0.00 0.00 12.64 12.12 65.02 0.00 0.00 0.00 5.48 3.37 8.08 10.29 5.48 22.46 12.47 0.00 3.01 2.01 0.00 1.97 0.00 50 E12_Aa NovelBoundary 1 534.09 621.47 453.41 489.48 553.99 559.96 930.55 475.06 489.06 463.85 157.20 236.03 352.09 194.01 183.08 512.69 423.47 509.13 565.85 581.07 279.91 163.80 471.12 51 ER12a ExonRegion 1 22.27 31.19 9.25 5.60 11.13 19.12 15.70 5.81 1.86 10.60 27.50 36.59 42.24 30.85 46.92 36.83 50.76 17.58 24.11 16.98 3.27 7.33 6.94 52 E12_Da NovelBoundary 0 13.19 9.08 2.72 20.51 23.60 5.00 40.89 6.08 3.99 16.36 9.53 30.46 21.10 29.78 4.45 36.23 94.44 4.52 31.62 14.89 0.00 5.88 3.59 53 E12a_E13a KnownJunction 0 7.33 0.00 1.45 0.00 11.12 5.00 6.23 2.26 0.00 4.38 14.95 6.00 13.64 27.08 15.20 3.85 13.28 2.07 4.80 0.00 5.68 0.00 0.00 54 ER13a ExonRegion 0 65.30 84.04 80.43 85.53 160.41 112.95 215.66 96.19 31.96 192.93 218.66 386.73 100.69 266.85 127.57 225.94 253.51 196.10 98.81 166.95 23.49 38.02 28.62 55 E13a_E14a KnownJunction 0 46.97 92.75 78.38 61.53 116.81 77.51 207.08 78.25 24.74 162.43 211.58 218.77 81.49 226.03 107.05 169.70 153.06 157.44 71.72 132.95 43.92 34.66 40.29 56 ER14a ExonRegion 0 67.42 95.49 69.54 67.65 100.55 92.34 190.87 81.12 36.08 168.33 211.68 234.71 72.50 319.16 126.72 238.86 263.51 168.33 80.24 176.31 32.42 38.15 29.61 57 E14a_E15a KnownJunction 0 123.95 119.12 96.18 105.31 193.72 113.85 264.09 114.97 40.88 194.75 246.59 285.69 78.24 408.85 155.63 264.38 249.46 209.55 141.18 194.82 37.13 30.07 26.89 58 ER15a ExonRegion 0 77.80 94.46 83.35 91.14 162.78 115.12 212.85 107.16 35.87 184.15 273.34 239.91 119.67 307.84 141.44 217.80 294.35 138.72 82.27 165.73 31.80 49.20 44.53 59 E15a_E16a KnownJunction 0 99.72 123.86 98.96 92.73 228.35 104.14 225.72 128.07 38.37 207.67 319.55 395.98 115.74 292.72 107.30 207.89 317.06 110.60 94.59 183.57 27.31 60.74 40.29 60 ER16a ExonRegion 0 87.85 117.00 99.31 111.69 194.11 117.64 245.81 130.26 46.67 227.27 348.28 360.27 169.86 281.30 160.58 235.89 300.55 139.35 80.49 183.80 17.78 47.40 42.15 61 E16a_E17a KnownJunction 0 118.39 159.31 144.97 148.13 199.92 109.88 337.45 147.62 54.14 255.81 447.96 436.04 173.04 373.07 169.36 377.94 314.73 170.08 110.50 247.74 26.01 51.13 62.66 62 ER17a ExonRegion 0 128.03 108.58 100.35 102.01 185.00 118.60 230.69 131.21 47.99 212.05 318.04 393.05 185.61 365.33 193.18 253.75 335.03 184.74 76.16 194.05 26.08 48.32 45.57 63 E17a_E18a KnownJunction 0 222.93 137.80 124.83 112.31 240.15 183.64 238.66 134.44 57.46 226.34 254.17 437.09 247.06 376.72 243.77 218.58 309.02 230.40 93.46 204.73 28.54 46.29 53.52 64 ER18a ExonRegion 0 192.99 158.59 118.72 114.87 186.57 137.46 278.81 136.73 51.73 273.26 369.26 381.78 214.52 393.46 218.80 219.17 347.37 164.38 133.00 212.10 23.41 70.76 52.90 65 E18a_E19a KnownJunction 0 227.08 230.42 129.21 126.02 213.16 138.84 372.95 181.10 49.85 332.90 385.94 381.72 197.23 339.16 249.95 172.18 417.95 100.44 119.82 197.50 26.75 57.50 20.32 66 ER19a ExonRegion 0 92.92 159.81 139.09 117.65 249.34 170.42 322.59 187.83 53.19 297.53 352.58 520.58 270.05 329.22 234.68 248.74 305.84 164.37 122.00 199.04 19.91 71.74 38.53 67 E19a_E20a KnownJunction 0 113.28 153.85 169.54 165.51 247.96 117.83 206.55 253.71 77.63 332.04 270.17 570.94 260.21 446.76 252.43 413.82 298.55 189.82 260.24 226.84 17.48 126.94 64.88 68 ER20a ExonRegion 0 96.90 102.73 82.97 80.62 166.85 88.91 191.50 101.08 28.23 159.52 157.49 262.60 157.25 207.26 133.25 155.34 154.35 72.23 70.43 95.61 14.25 39.86 21.58 69 ER20b ExonRegion 1 8.38 31.97 9.51 11.12 37.46 31.83 47.34 15.90 4.84 34.13 15.08 57.32 18.57 22.22 21.12 20.57 9.37 0.00 4.97 24.09 1.59 14.75 0.00