Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RRBP1 Gene 0 159.17 11.97 94.29 41.89 42.58 19.45 22.02 60.72 63.36 41.90 105.46 66.82 64.73 129.71 239.78 141.04 122.48 24.49 106.92 13.97 622.25 350.10 371.65 2 398782 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 360807 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 377807 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 377813 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 246043 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 455029 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 495501 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 470422 Transcript 0 3.88 0.07 3.73 0.95 0.47 0.00 0.37 1.47 1.20 0.86 4.82 0.25 0.00 1.21 6.57 2.04 2.34 0.10 0.56 0.45 12.14 5.60 3.55 10 468428 Transcript 0 32.22 0.71 11.05 7.13 5.94 2.59 3.98 8.07 9.03 3.92 14.67 3.48 4.37 12.22 22.31 17.36 16.59 3.04 14.75 2.02 49.74 75.53 53.14 11 ER1a ExonRegion 0 3.09 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.95 0.00 1.19 0.00 0.00 2.37 0.67 5.26 3.05 0.00 0.00 1.47 3.56 2.72 1.36 12 ER1b ExonRegion 0 37.21 1.30 1.15 1.09 11.83 0.77 5.61 0.38 5.48 2.80 17.16 0.00 0.00 23.97 35.34 24.25 28.52 6.32 16.82 4.09 62.94 30.50 59.61 13 E1_Ac KnownBoundary 0 151.21 5.92 2.72 2.06 32.51 5.39 21.46 1.68 17.36 10.23 35.90 0.00 5.84 66.28 84.06 54.69 77.79 21.68 67.95 11.44 184.90 99.20 189.93 14 ER1c ExonRegion 0 89.72 2.85 17.36 2.28 13.93 13.95 12.07 13.36 16.55 17.19 50.84 13.39 10.48 64.47 114.44 52.34 80.53 14.74 54.20 8.59 435.33 119.72 160.40 15 E1a_E2a KnownJunction 0 10.67 2.89 22.80 8.69 4.16 0.00 0.00 22.84 13.51 16.14 11.27 18.46 0.00 52.80 100.01 30.76 37.59 13.89 21.18 2.75 243.65 132.69 193.86 16 E1a_E3a KnownJunction 1 17.86 0.00 44.03 17.31 0.00 0.00 1.81 20.33 38.11 21.46 85.50 11.10 26.13 129.03 206.81 105.70 78.45 29.10 124.62 9.08 372.33 211.01 364.76 17 ER2a ExonRegion 0 16.27 2.35 33.59 7.89 6.92 1.21 4.78 15.51 16.28 18.92 18.70 25.81 27.35 43.72 79.31 36.05 43.25 14.59 44.31 6.36 250.54 119.55 193.70 18 E2a_E3a KnownJunction 0 17.71 0.00 41.54 12.42 15.03 0.00 3.93 14.38 23.26 22.81 29.27 12.60 27.11 55.57 105.20 37.60 60.40 10.36 49.32 3.26 271.26 144.33 183.19 19 E3_Ab NovelBoundary 1 29.41 2.57 54.52 29.53 20.46 13.97 16.47 39.97 48.52 41.31 142.56 17.41 32.30 129.85 306.08 130.56 125.85 36.02 179.58 26.85 601.34 310.03 423.49 20 ER3a ExonRegion 1 27.61 0.83 74.69 26.14 16.05 6.17 11.25 39.52 56.20 41.71 134.60 27.35 44.34 171.86 295.27 139.15 137.59 40.15 176.79 21.66 686.66 347.28 483.08 21 ER3b ExonRegion 0 122.51 11.19 97.71 56.29 37.65 24.45 24.87 70.25 90.83 58.28 164.89 219.33 153.96 189.08 290.55 228.00 180.58 36.07 217.43 21.01 934.32 645.29 592.60 22 E3_Da KnownBoundary 1 199.52 25.72 71.35 60.47 47.79 17.83 18.55 67.69 77.05 35.38 109.76 256.43 116.06 110.54 217.81 126.63 147.08 24.25 91.58 21.09 723.04 225.71 312.86 23 E3a_E3d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER3c ExonRegion 0 160.34 19.17 91.00 49.37 58.14 22.65 24.94 55.45 66.29 41.66 102.99 139.85 124.17 163.93 307.29 156.28 132.94 23.85 141.09 17.87 695.85 354.52 440.57 25 E3_Db KnownBoundary 0 525.72 71.24 203.27 141.84 154.84 48.21 91.24 131.97 160.94 104.90 129.98 101.28 129.37 178.41 489.28 264.89 208.41 72.92 291.02 21.67 1111.81 550.98 889.83 26 ER3d ExonRegion 0 254.07 24.55 65.95 28.11 48.14 23.10 33.76 51.11 47.78 41.51 106.62 53.87 81.76 208.82 369.58 164.97 144.35 25.99 131.98 17.63 738.57 287.62 484.55 27 E3_Ac KnownBoundary 1 197.37 30.98 141.33 58.47 78.27 20.67 38.24 78.29 91.61 50.96 166.88 62.57 180.02 135.97 269.61 199.69 147.73 34.12 174.31 17.96 692.52 616.56 635.53 28 ER3e ExonRegion 0 249.16 44.33 110.80 65.00 64.97 20.64 37.04 86.09 98.43 71.94 148.75 99.68 141.18 179.36 350.47 206.40 204.90 28.15 188.02 19.31 876.13 586.83 589.56 29 E3_Ad KnownBoundary 0 235.97 18.09 128.06 72.58 61.29 17.04 35.51 109.79 103.38 70.00 151.30 90.33 87.98 187.06 329.19 233.78 215.15 44.89 187.11 9.59 975.96 573.27 609.07 30 ER3f ExonRegion 0 145.56 16.56 109.99 68.26 78.74 9.95 36.77 88.32 105.91 60.10 155.94 106.90 91.23 201.95 309.95 236.57 218.41 37.66 185.51 19.10 1000.90 597.52 542.82 31 E3_Dc NovelBoundary 0 62.68 17.76 46.86 32.26 26.83 8.86 20.40 36.51 64.44 17.57 71.76 34.36 11.53 62.75 123.25 128.00 93.31 18.20 96.10 12.27 362.14 312.54 247.21 32 E3c_E4a KnownJunction 0 6.08 0.00 21.14 9.12 7.56 0.00 0.00 19.67 16.67 15.58 10.21 12.60 6.01 52.33 42.28 23.58 43.76 1.58 34.17 0.00 117.07 107.71 87.41 33 E3d_E4a KnownJunction 0 166.03 20.33 88.88 60.20 58.57 14.14 56.40 68.35 90.42 34.65 130.35 111.19 46.26 170.88 270.85 233.87 213.37 42.82 220.99 17.71 795.01 629.54 566.21 34 E3d_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER3g ExonRegion 0 119.23 22.37 80.47 52.70 49.35 15.28 43.54 58.77 91.26 28.29 150.98 96.69 42.21 171.25 264.34 230.84 196.95 39.83 198.20 14.42 796.76 581.07 487.16 36 ER4a ExonRegion 0 103.44 15.86 104.07 47.95 38.65 15.73 28.21 63.83 78.03 44.75 142.62 60.55 42.65 159.65 250.79 191.17 183.01 35.36 111.55 15.16 866.58 409.57 451.99 37 E4a_E5a KnownJunction 0 134.02 20.79 97.13 51.94 57.39 32.94 22.74 66.70 94.07 73.98 165.88 49.07 41.39 182.77 276.53 186.28 214.96 19.73 105.51 18.02 880.51 452.27 429.72 38 ER5a ExonRegion 1 110.71 8.66 107.82 62.80 37.63 12.14 15.55 64.42 85.83 50.59 139.42 35.09 31.72 146.37 249.08 136.50 167.11 25.81 103.64 23.87 766.35 359.11 434.31 39 E5a_E6a KnownJunction 0 153.73 9.93 130.48 59.63 41.60 18.91 31.36 90.90 90.62 50.02 157.04 62.72 40.42 185.41 263.55 163.63 211.78 37.39 129.42 23.65 884.47 411.67 494.94 40 ER6a ExonRegion 0 106.37 11.12 131.28 56.32 34.59 16.90 22.97 64.04 74.36 48.85 136.52 51.36 43.80 152.53 242.57 159.62 146.28 28.03 79.80 19.23 805.26 344.30 378.06 41 E6a_E7a KnownJunction 1 138.32 12.37 155.49 74.95 66.13 28.90 32.72 71.51 82.09 25.98 188.10 62.12 35.39 167.93 302.74 182.69 120.52 41.00 195.96 10.99 922.09 427.84 546.15 42 ER7a ExonRegion 1 98.80 14.25 143.19 56.38 51.09 18.43 15.78 59.15 72.71 48.90 158.82 51.48 24.87 168.34 277.25 162.27 160.25 33.69 112.45 15.98 872.39 410.77 441.51 43 E7a_E8a KnownJunction 1 94.24 8.75 183.52 65.76 53.06 23.74 27.07 75.82 84.87 57.81 182.26 51.77 31.65 152.57 287.66 218.15 164.28 39.88 106.73 16.81 807.00 404.02 497.33 44 ER8a ExonRegion 1 94.80 9.60 171.93 65.15 37.91 22.66 19.89 66.18 86.84 60.17 161.02 54.37 33.90 163.78 304.90 158.35 169.72 43.96 118.40 14.11 878.81 403.68 426.48 45 E8a_E9a KnownJunction 1 134.91 15.72 171.70 37.39 39.05 25.44 11.92 52.86 59.09 61.11 162.78 11.85 20.62 135.85 289.64 172.95 184.10 49.79 101.74 11.12 837.58 363.60 457.55 46 ER9a ExonRegion 1 112.97 9.51 129.85 39.16 35.25 18.80 13.80 49.25 70.13 50.13 122.75 38.72 30.87 135.22 252.99 151.39 156.02 29.83 105.12 13.10 817.12 362.20 364.78 47 E9a_E10a KnownJunction 1 233.08 19.34 147.95 45.45 32.60 34.70 26.94 76.15 76.45 50.90 160.72 37.36 39.45 124.08 296.93 267.71 213.65 45.89 133.56 11.70 968.11 453.25 471.03 48 ER10a ExonRegion 0 132.81 13.58 114.09 32.31 35.70 21.99 19.58 71.14 67.79 43.11 128.09 38.87 35.95 132.97 251.21 159.38 134.56 39.77 102.04 12.01 760.60 353.02 397.89 49 E10a_E11a KnownJunction 0 111.20 6.64 84.15 28.83 23.51 2.44 33.74 68.43 49.77 23.69 86.60 62.72 13.64 105.25 285.43 144.32 100.05 20.44 90.54 3.26 607.33 365.20 313.03 50 ER11a ExonRegion 0 88.89 8.66 125.34 35.71 22.17 4.66 21.07 70.27 62.57 47.29 79.03 47.13 36.58 143.57 254.23 149.46 107.33 33.26 73.08 13.01 653.81 348.96 359.95 51 E11a_E12a KnownJunction 0 130.62 12.17 154.73 42.22 30.90 8.29 18.46 60.26 65.42 52.86 76.65 56.12 73.05 180.76 245.26 153.04 121.36 37.52 72.10 26.46 713.84 290.49 416.74 52 ER12a ExonRegion 0 148.71 11.51 194.32 69.88 35.76 17.79 19.98 100.76 89.36 75.47 169.39 53.19 62.62 175.24 350.89 195.21 147.71 38.82 144.88 29.32 938.15 481.98 570.58 53 E12a_E13a KnownJunction 0 247.08 8.42 241.86 76.88 40.41 22.54 27.91 131.93 118.84 89.88 255.91 82.08 96.75 149.21 463.19 206.70 218.14 38.55 200.76 43.08 1099.33 676.02 736.26 54 ER13a ExonRegion 0 158.44 6.34 201.47 63.54 34.35 19.68 18.83 110.38 110.72 77.13 180.74 56.98 59.00 163.23 336.01 190.82 174.63 34.49 148.14 25.94 1051.74 510.60 446.12 55 E13a_E15a KnownJunction 1 193.66 18.29 166.40 76.75 67.49 20.22 15.68 83.09 98.15 71.64 177.26 45.16 67.85 183.30 258.24 139.19 201.12 36.52 104.76 29.66 910.23 350.87 437.23 56 ER14a ExonRegion 0 2.68 0.21 0.00 0.86 1.41 0.00 1.11 0.27 1.17 0.90 1.47 0.75 0.00 0.74 4.49 2.20 2.80 0.29 1.68 1.35 13.26 5.95 6.56 57 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 ER15a ExonRegion 1 158.17 17.17 174.56 65.74 58.84 29.16 35.69 121.62 107.93 71.55 210.17 56.84 66.67 184.36 324.10 170.59 200.75 33.46 160.36 28.76 1132.59 534.84 532.95 59 E15a_E16a KnownJunction 0 255.90 19.60 211.49 73.48 61.21 53.49 60.06 133.74 106.89 73.12 149.51 48.32 111.84 151.63 387.29 205.42 204.11 21.60 181.65 26.08 1164.87 522.57 601.38 60 ER16a ExonRegion 0 177.66 15.40 124.48 40.24 60.33 25.54 27.87 70.70 74.20 54.79 154.45 70.35 46.17 173.05 369.39 185.26 177.42 25.49 157.83 17.12 957.54 474.32 420.39 61 E16a_E17a KnownJunction 0 146.84 17.96 99.52 43.52 48.64 23.34 16.30 75.04 56.86 56.41 126.72 69.47 65.09 162.22 272.95 170.47 132.59 33.33 90.83 18.28 804.84 307.64 378.41 62 ER17a ExonRegion 0 151.21 11.70 108.21 38.83 48.25 17.50 17.06 67.24 62.94 48.99 120.96 59.27 65.14 187.86 303.57 180.80 149.93 33.73 80.87 18.13 834.28 377.14 480.79 63 E17a_E18a KnownJunction 0 228.11 9.74 146.12 56.07 55.60 40.94 39.44 78.66 81.05 60.22 140.93 43.81 58.60 147.74 283.21 149.79 152.97 46.10 71.63 9.52 868.40 312.66 458.14 64 ER18a ExonRegion 0 162.77 9.18 130.50 45.00 51.21 34.19 26.89 60.68 84.04 59.68 135.43 36.31 41.25 154.34 282.61 143.52 126.53 47.92 107.10 12.31 753.72 354.27 420.76 65 E18a_E19a KnownJunction 0 239.67 9.01 173.41 62.96 108.83 50.14 35.82 93.44 107.35 65.09 156.62 104.13 70.29 180.88 320.66 213.45 146.42 53.27 152.85 17.71 950.07 426.00 533.69 66 ER19a ExonRegion 0 246.19 10.39 181.12 68.41 79.86 55.52 41.10 110.57 119.70 72.38 210.28 91.04 74.65 203.38 408.15 279.71 198.51 48.20 162.54 23.14 995.37 543.71 651.40 67 E19_Da NovelBoundary 0 89.79 0.00 37.11 15.92 11.80 7.72 5.43 16.35 24.36 9.11 29.64 26.26 25.16 9.71 41.29 46.48 27.49 7.05 52.71 3.26 110.15 225.89 94.41 68 E19a_E20b KnownJunction 0 245.15 19.40 214.39 81.54 98.81 47.93 53.35 148.52 139.76 85.88 191.00 104.88 66.39 199.48 437.73 335.47 163.07 49.62 155.77 30.49 913.25 556.06 585.76 69 I19 Intron 0 46.68 1.29 22.07 17.87 11.35 3.31 5.33 15.02 13.27 3.26 16.81 11.37 8.83 13.73 19.24 25.21 20.66 5.94 22.97 3.61 69.36 125.70 72.24 70 I19_AR1 ActiveIntronRegion 0 46.87 1.30 22.16 17.95 11.40 3.32 5.36 15.09 13.32 3.28 16.88 11.42 8.87 13.78 19.32 25.32 20.74 5.96 23.06 3.62 69.64 126.22 72.53 71 E20_Aa NovelBoundary 0 66.90 0.00 27.11 16.65 8.66 8.35 1.72 7.56 14.32 2.85 7.37 13.20 6.82 12.36 28.06 10.77 26.74 9.16 3.58 2.68 65.42 78.50 39.44 72 ER20a ExonRegion 0 33.09 0.18 12.83 10.37 4.88 1.69 4.75 9.06 11.35 5.30 20.62 1.20 3.13 12.13 26.11 25.66 23.40 3.63 16.49 2.93 59.45 92.28 60.56 73 E20_Ab KnownBoundary 0 78.24 0.00 9.99 14.92 19.78 0.00 5.74 11.67 13.69 11.90 31.69 0.00 0.00 14.72 26.21 49.05 13.74 6.55 34.64 6.33 55.17 118.85 51.99 74 ER20b ExonRegion 0 237.47 14.73 197.45 78.67 52.95 27.84 28.35 105.00 144.52 81.24 177.05 68.95 79.43 184.24 373.10 257.29 175.96 52.71 120.04 28.76 971.28 553.56 488.66 75 E20_Da KnownBoundary 0 6.37 3.35 13.84 4.93 4.33 0.00 0.00 4.60 6.05 4.30 2.68 0.00 0.00 5.36 18.30 0.00 3.93 2.40 3.58 2.43 28.36 28.72 32.35 76 E20a_E20c KnownJunction 1 415.18 5.92 276.48 91.60 80.65 7.84 18.24 129.14 150.26 106.48 199.68 50.57 86.68 148.63 292.36 225.24 189.71 67.15 119.44 22.05 1112.36 453.07 471.80 77 ER20c ExonRegion 0 31.36 1.24 9.27 3.88 7.01 3.48 3.21 7.07 6.71 2.54 8.73 5.76 5.61 12.30 18.51 9.05 9.78 2.46 13.01 1.11 40.03 58.79 45.73 78 E20_Ac KnownBoundary 0 26.75 0.00 16.56 13.25 8.66 6.87 0.00 6.28 10.24 0.00 5.00 19.21 27.27 12.01 18.91 3.93 4.77 4.81 9.22 3.26 43.18 52.84 56.08 79 ER20d ExonRegion 0 366.54 10.76 246.51 99.77 71.73 38.07 31.06 163.64 165.68 89.15 226.41 79.91 94.25 210.47 481.71 285.50 197.82 61.75 166.68 25.43 1103.53 601.43 647.87 80 E20b_E21a KnownJunction 0 677.68 6.71 223.06 94.49 176.83 75.70 66.46 169.18 160.13 100.65 221.48 101.88 95.12 261.99 669.26 442.02 227.86 69.02 224.38 18.22 1105.14 695.92 859.09 81 ER21a ExonRegion 0 408.39 15.85 179.97 63.80 71.48 33.13 30.67 101.11 108.47 71.75 141.69 72.24 81.60 209.86 408.38 273.00 177.97 48.55 141.75 15.48 888.24 545.52 543.71 82 E21a_E22a KnownJunction 0 461.04 5.99 198.01 47.71 73.17 36.68 43.50 125.89 109.66 72.61 143.46 85.23 100.97 179.71 316.95 223.87 194.02 41.12 60.33 8.37 833.19 348.42 520.20 83 E22_Aa NovelBoundary 1 150.77 3.09 21.29 5.86 16.72 2.84 1.72 11.91 1.79 1.24 7.16 0.00 28.24 9.83 28.56 11.88 8.42 2.36 17.13 0.00 40.71 71.40 49.34 84 ER22a ExonRegion 1 422.09 24.89 166.68 72.07 59.06 42.20 35.15 121.94 99.82 63.30 129.73 59.68 136.01 180.16 368.04 207.52 185.16 21.71 127.38 21.10 886.07 466.68 451.89 85 E22a_E23a KnownJunction 1 419.19 39.27 184.50 84.87 53.40 47.19 54.85 119.40 78.33 69.30 109.66 17.56 100.64 178.47 358.98 142.95 119.49 32.62 106.17 20.45 896.27 457.72 340.17 86 ER23a ExonRegion 0 379.67 20.44 146.77 60.66 125.81 59.16 50.26 112.59 80.87 64.24 122.67 64.07 89.68 197.27 309.61 147.17 185.32 26.76 113.03 19.75 858.98 446.69 403.57 87 E23a_E24a KnownJunction 0 492.90 17.17 204.93 90.00 198.22 46.45 78.12 124.74 108.82 73.28 116.92 81.93 125.97 214.20 288.40 228.57 153.81 62.43 154.08 19.05 942.54 629.42 653.03 88 ER24a ExonRegion 0 380.03 14.94 254.78 133.79 135.72 55.03 63.36 197.15 150.99 99.34 200.40 156.47 171.64 246.21 518.83 380.81 220.62 49.05 239.33 32.10 1092.56 914.80 958.64 89 E24a_E25a KnownJunction 0 8.96 0.00 11.18 2.00 0.00 0.00 0.00 4.15 2.43 1.67 13.00 0.00 0.00 2.88 15.20 3.93 4.21 0.00 0.00 0.00 23.17 10.84 4.10 90 E24b_E25a KnownJunction 0 329.10 15.26 225.86 118.00 84.72 39.07 39.70 199.04 139.58 86.01 185.73 146.00 93.18 202.01 456.15 343.67 194.48 47.96 190.31 17.19 1061.83 765.54 893.67 91 ER24b ExonRegion 0 261.74 10.17 205.45 109.49 73.14 29.95 29.13 187.25 130.92 75.70 192.00 144.32 109.43 198.68 462.27 352.69 217.86 42.50 186.87 14.89 1154.74 786.18 861.42 92 ER25a ExonRegion 0 342.29 9.99 153.34 75.20 85.06 31.06 33.87 113.86 98.60 55.76 133.74 96.12 93.24 123.02 297.29 172.70 141.46 23.19 121.31 11.96 648.19 530.20 440.54 93 IG31_AR2 ActiveIntergenicRegion 0 5.55 13.01 6.09 8.90 7.27 10.16 4.87 7.71 8.28 6.90 0.50 2.40 3.10 0.56 2.00 0.62 0.69 4.03 3.99 6.62 8.75 5.89 9.88