Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SDCBP2 Gene 0 4.40 1.94 11.43 8.01 3.84 8.90 2.44 11.14 19.93 8.54 2.17 0.60 0.18 1.87 3.70 1.28 1.66 2.88 9.14 3.15 7.06 9.96 8.49 2 360779 Transcript 0 1.56 0.00 2.34 0.80 0.35 0.00 2.50 2.14 1.07 3.19 3.28 0.00 0.00 2.12 5.05 0.71 1.94 0.48 1.45 3.75 1.63 0.00 2.62 3 436186 Transcript 0 1.03 1.15 4.56 0.00 0.00 4.16 2.25 0.04 2.77 0.97 0.00 0.00 0.00 0.00 0.00 1.68 0.00 0.43 0.00 0.00 0.07 1.20 0.00 4 245974 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 339987 Transcript 0 0.00 0.00 1.82 0.00 0.00 9.71 0.00 1.56 0.00 3.75 1.99 0.00 0.00 4.96 5.86 0.00 2.86 0.00 6.75 4.51 4.21 0.00 0.00 6 381812 Transcript 0 2.61 1.30 0.76 2.16 0.57 0.77 0.28 1.09 0.00 0.36 0.81 0.00 0.00 1.38 2.10 5.68 0.70 1.58 6.09 3.16 3.47 1.33 3.63 7 381808 Transcript 0 0.02 0.83 3.88 0.61 0.81 6.49 1.75 1.77 7.86 3.09 0.00 0.00 0.00 0.40 0.02 0.00 0.02 0.69 5.54 0.63 3.31 1.43 0.92 8 467129 Transcript 0 1.31 1.09 5.84 5.02 2.17 2.83 0.74 4.38 4.89 3.37 0.57 0.00 0.00 0.00 0.03 0.79 0.02 0.44 1.63 0.01 2.00 6.97 2.24 9 ER1a ExonRegion 0 1.56 0.00 2.34 0.80 0.35 0.00 2.50 2.14 1.07 3.19 3.28 0.00 0.00 2.12 5.05 0.71 1.94 0.48 1.45 3.75 1.63 0.00 2.62 10 E1_Ab KnownBoundary 0 6.96 0.00 6.24 1.80 0.00 0.00 6.27 5.83 4.22 7.20 6.90 0.00 0.00 2.47 16.69 3.50 8.13 1.70 4.42 12.08 6.12 0.00 8.37 11 ER1b ExonRegion 0 3.81 0.00 2.43 1.56 3.61 0.00 3.38 4.57 1.27 2.65 3.14 1.67 1.81 1.52 3.86 2.48 2.27 1.95 2.37 5.39 2.39 1.01 9.13 12 E1_Da NovelBoundary 0 2.96 3.35 2.45 5.33 8.40 11.81 16.74 2.55 4.46 3.81 2.68 0.00 0.00 0.00 0.00 7.86 9.35 6.72 4.05 0.00 8.34 3.12 3.41 13 E1a_E4a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 14 Ix_SR1 SilentIntronRegion 0 2.91 2.90 3.70 4.28 3.89 2.85 8.28 4.07 2.12 3.12 1.68 12.53 15.04 5.23 5.79 8.70 11.73 7.20 5.97 11.18 3.75 2.45 7.42 15 E2_Aa NovelBoundary 0 9.48 0.00 2.81 2.06 4.24 0.00 6.01 6.82 1.79 3.06 0.00 6.30 0.00 2.41 0.00 14.61 0.00 13.31 9.22 11.06 2.66 0.00 3.59 16 ER2a ExonRegion 0 0.00 0.00 0.67 0.00 0.00 5.23 0.00 0.95 0.00 1.72 1.30 0.00 0.00 2.56 2.83 0.00 1.32 0.00 3.90 2.50 2.31 0.00 0.00 17 E2_Da NovelBoundary 0 10.89 9.67 4.64 0.00 0.00 0.00 2.25 6.37 0.00 7.71 1.95 12.30 14.77 9.01 15.45 8.29 3.74 2.57 14.40 3.26 8.96 2.57 7.85 18 E2a_E4a KnownJunction 0 0.00 0.00 2.96 0.00 0.00 14.20 0.00 2.18 0.00 5.78 2.68 0.00 0.00 7.36 8.90 0.00 4.39 0.00 9.60 6.52 6.12 0.00 0.00 19 E3_Aa NovelBoundary 0 0.00 2.57 2.63 9.02 12.56 26.41 6.14 6.90 6.08 8.52 2.16 12.00 6.66 0.00 17.18 3.33 0.00 10.07 3.67 12.08 2.35 0.00 3.50 20 ER3a ExonRegion 0 1.45 2.59 1.51 4.32 1.14 1.54 0.56 2.19 0.00 0.73 1.63 0.00 0.00 2.76 4.21 11.37 1.40 3.16 12.18 6.33 4.54 2.66 3.94 21 E3_Da NovelBoundary 0 0.00 0.00 0.00 2.06 3.23 0.00 4.11 9.32 3.50 4.70 10.21 6.30 0.00 0.00 14.34 0.00 9.26 2.11 0.00 17.71 8.09 2.82 7.94 22 E3a_E4a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 3.33 23 ER4a ExonRegion 0 2.55 0.00 5.15 4.07 1.87 4.09 1.02 3.76 4.04 8.26 3.89 0.00 0.00 2.14 4.13 0.00 3.89 2.73 10.52 2.77 5.77 10.79 12.39 24 E4a_E5a KnownJunction 0 10.08 0.00 11.77 5.56 4.33 0.00 1.94 6.45 17.30 5.05 2.68 0.00 0.00 2.47 5.81 0.00 0.00 1.74 13.84 2.68 2.97 6.25 25.27 25 ER5a ExonRegion 0 5.17 0.64 11.41 1.67 2.64 6.81 1.55 8.67 10.16 5.62 0.86 0.00 0.00 2.27 0.66 0.00 3.49 0.45 3.05 0.33 9.10 2.95 11.03 26 E5a_E6a KnownJunction 0 7.26 3.35 6.15 1.86 3.40 13.06 1.68 13.55 3.91 5.51 0.00 0.00 0.00 7.12 0.00 3.50 4.77 0.00 0.00 0.00 8.34 5.45 8.11 27 ER6a ExonRegion 0 4.92 2.64 6.18 5.36 10.41 18.28 2.10 5.99 9.56 9.10 0.00 1.80 1.95 4.39 3.13 0.00 3.63 0.00 12.87 2.09 8.95 16.23 11.19 28 E6a_E7b KnownJunction 0 6.30 2.83 11.83 3.86 7.64 10.39 0.00 8.83 13.40 2.36 0.00 0.00 0.00 2.41 0.00 0.00 4.68 0.00 0.00 2.94 13.90 10.84 14.77 29 ER7a ExonRegion 0 0.02 0.83 3.88 0.61 0.81 6.49 1.75 1.77 7.86 3.09 0.00 0.00 0.00 0.40 0.02 0.00 0.02 0.69 5.54 0.63 3.31 1.43 0.92 30 E7_Ab KnownBoundary 0 0.00 3.35 6.50 1.66 0.00 0.00 2.25 1.97 10.19 4.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 0.00 2.69 0.00 31 ER7b ExonRegion 0 7.30 1.40 11.98 3.58 4.23 11.15 1.33 13.57 24.49 9.15 0.62 0.00 0.00 2.70 0.07 0.00 0.38 4.02 9.92 1.51 9.25 11.55 7.60 32 E7_Da KnownBoundary 0 6.30 0.00 7.01 0.00 0.00 0.00 0.00 0.00 7.61 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 2.47 0.00 0.00 33 E7a_E8a KnownJunction 0 7.26 5.92 21.76 12.62 0.00 5.00 2.12 13.60 31.28 4.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.56 0.00 9.14 21.06 12.29 34 ER7c ExonRegion 0 1.03 1.15 4.56 0.00 0.00 4.16 2.25 0.04 2.77 0.97 0.00 0.00 0.00 0.00 0.00 1.68 0.00 0.43 0.00 0.00 0.07 1.20 0.00 35 ER8a ExonRegion 0 7.42 5.48 16.75 10.93 6.98 16.23 3.20 14.82 35.76 16.15 2.24 0.07 0.00 4.19 3.84 0.00 2.81 2.39 11.82 6.59 10.28 17.75 14.90 36 E8a_E9a KnownJunction 0 6.22 0.00 19.72 14.78 0.00 13.00 0.00 23.33 48.18 17.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.24 0.00 13.53 12.19 0.00 37 ER9a ExonRegion 0 5.03 1.89 26.32 20.66 5.43 14.64 4.09 22.78 51.39 23.81 4.92 4.15 0.00 2.32 5.48 2.64 3.63 6.20 18.91 8.41 16.78 17.36 15.67 38 E9a_E10b KnownJunction 0 14.37 0.00 13.13 33.46 0.00 32.82 10.07 20.17 48.73 19.74 9.48 0.00 0.00 0.00 9.64 0.00 4.21 6.01 27.48 2.56 20.76 14.08 18.69 39 E10_Aa NovelBoundary 0 3.70 0.00 13.54 6.79 0.00 2.38 0.00 6.00 6.11 3.33 2.26 0.00 0.00 2.47 0.00 3.85 0.00 0.00 13.74 0.00 0.00 8.33 0.00 40 ER10a ExonRegion 0 1.31 1.09 5.84 5.02 2.17 2.83 0.74 4.38 4.89 3.37 0.57 0.00 0.00 0.00 0.03 0.79 0.02 0.44 1.63 0.01 2.00 6.97 2.24 41 E10_Ab KnownBoundary 0 3.11 0.00 6.09 0.00 0.00 4.83 0.00 5.05 11.81 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 4.05 0.00 5.87 8.27 3.84 42 ER10b ExonRegion 0 15.09 5.03 24.45 24.92 7.59 26.86 5.25 28.91 44.15 17.64 5.29 2.00 0.00 1.70 10.68 1.50 2.18 14.09 19.18 5.45 16.49 23.08 21.98 43 E10_Da NovelBoundary 0 3.78 0.00 4.61 2.00 0.00 0.00 1.63 5.30 9.52 9.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 18.54 3.00 3.15 15.12 12.80 44 E10a_E11a KnownJunction 0 13.85 6.05 29.45 26.07 11.71 38.33 2.25 27.89 40.86 11.93 10.16 0.00 0.00 7.06 4.45 3.42 8.79 11.73 18.35 2.62 11.80 27.92 30.39 45 ER11a ExonRegion 0 5.13 2.14 16.01 11.74 4.27 8.43 3.19 17.39 28.78 8.66 3.16 0.00 0.00 1.47 6.51 0.32 1.36 3.19 10.40 2.38 6.82 12.58 9.00 46 ER11b ExonRegion 0 1.06 0.00 0.61 1.36 0.00 0.92 1.32 2.81 1.24 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.69 0.40 0.00 0.00 1.04 0.00