Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 JAG1 Gene 0 79.09 35.49 105.87 66.55 64.74 170.55 45.50 55.79 129.75 55.49 27.64 50.44 10.31 49.22 6.22 57.38 17.24 68.20 7.64 6.91 57.27 64.46 51.01 2 423891 Transcript 0 0.83 0.00 0.13 0.22 0.88 18.74 2.12 0.77 1.52 0.57 0.86 0.00 0.00 4.48 0.00 4.54 0.36 2.78 0.86 0.86 3.03 2.83 6.72 3 254958 Transcript 0 100.72 66.32 191.68 131.90 84.10 289.04 73.48 92.45 231.21 88.07 44.43 117.89 27.92 72.63 8.38 125.45 29.78 96.97 8.62 8.61 73.83 119.55 77.84 4 488480 Transcript 0 5.92 0.42 4.97 1.30 3.55 7.46 5.46 1.84 9.32 2.10 1.15 1.41 0.02 3.92 0.01 5.61 1.22 1.73 2.06 0.41 3.40 4.62 2.35 5 ER1a ExonRegion 0 1.65 0.00 0.27 0.44 1.75 37.48 4.23 1.55 3.04 1.15 1.71 0.00 0.00 8.96 0.00 9.09 0.72 5.56 1.72 1.71 6.05 5.65 13.43 6 E1_Ab KnownBoundary 0 3.26 0.00 4.23 5.16 8.66 207.44 24.29 18.28 20.66 6.61 7.58 0.00 0.00 31.61 0.00 55.88 4.58 46.10 14.02 5.88 14.70 29.51 83.83 7 ER1b ExonRegion 0 0.69 0.64 5.52 2.60 1.08 38.42 3.43 5.88 13.94 9.03 5.66 8.11 2.18 12.72 0.55 11.89 2.42 18.51 3.49 1.41 17.94 8.20 19.13 8 E1a_E2a KnownJunction 0 6.08 2.57 7.78 12.22 3.06 36.57 3.53 17.74 37.18 21.79 14.42 6.30 0.00 11.89 4.45 31.36 3.93 72.17 0.00 0.00 41.21 6.18 11.78 9 ER2a ExonRegion 0 3.08 4.59 18.28 8.89 9.50 52.40 5.59 10.91 58.91 19.67 19.65 11.04 2.56 33.62 0.81 32.50 14.53 58.82 1.16 4.52 40.93 16.02 32.84 10 E2a_E3a KnownJunction 0 13.63 11.71 24.25 18.38 8.49 82.91 17.09 11.38 88.16 20.44 12.85 12.60 0.00 51.56 0.00 43.41 27.40 82.99 0.00 10.87 62.33 23.70 51.82 11 ER3a ExonRegion 0 10.05 8.88 23.28 19.05 12.40 105.69 17.54 18.35 103.32 37.14 22.04 21.06 3.34 58.00 4.24 36.18 25.39 112.36 6.06 12.32 59.42 36.94 48.17 12 E3a_E4a KnownJunction 0 22.30 9.47 16.62 21.61 10.95 92.22 21.82 30.11 102.98 45.88 34.75 6.00 0.00 79.99 0.00 26.49 25.15 122.29 9.60 8.82 75.18 45.80 51.05 13 I3 Intron 0 18.62 3.75 25.61 6.20 7.21 5.90 5.79 6.95 10.67 7.37 1.01 3.44 0.39 1.88 0.81 8.93 1.41 3.72 0.68 0.70 2.40 1.03 4.52 14 I3_SR2 SilentIntronRegion 0 11.73 2.75 30.05 5.61 5.74 4.23 7.68 10.48 12.83 9.09 1.20 2.53 0.00 2.64 1.08 11.35 1.90 7.20 2.29 0.00 4.42 0.99 7.82 15 I3_AR2 ActiveIntronRegion 0 19.41 4.16 32.68 8.59 4.49 5.00 4.76 6.96 14.59 9.06 2.26 1.25 1.13 1.58 0.30 9.33 1.57 5.89 1.02 1.35 2.99 1.09 6.45 16 I3_AR3 ActiveIntronRegion 0 29.14 4.80 27.96 6.95 9.48 6.06 6.51 5.35 7.91 4.82 1.06 3.33 0.30 1.36 0.48 8.63 1.30 2.57 0.00 0.77 1.64 0.66 3.43 17 I3_SR3 SilentIntronRegion 0 19.05 2.18 20.74 5.22 12.61 8.65 3.69 0.55 3.16 3.30 0.41 3.82 0.00 0.57 0.88 6.37 0.71 1.58 0.00 0.00 0.94 0.45 2.52 18 ER4a ExonRegion 0 15.14 15.34 38.96 22.71 15.99 120.23 18.57 35.80 105.49 42.93 30.11 28.66 2.50 59.49 3.97 57.57 23.39 102.85 8.81 7.41 80.21 39.24 63.82 19 E4_Da NovelBoundary 0 6.45 0.00 22.35 11.92 4.33 5.79 15.46 26.37 9.46 8.52 0.00 13.50 6.01 0.00 0.00 11.71 0.00 8.50 0.00 0.00 0.00 4.96 4.35 20 E4a_E5a KnownJunction 0 17.41 29.86 27.88 15.38 16.55 106.47 11.79 30.48 109.58 31.97 20.48 49.22 13.96 68.57 8.90 64.26 17.58 99.49 12.80 6.46 55.72 36.19 54.38 21 ER5a ExonRegion 0 12.66 10.87 21.25 12.58 10.13 96.23 22.75 21.85 112.68 28.88 22.34 36.98 7.07 54.79 8.70 63.34 15.31 105.93 10.18 4.64 59.54 37.98 44.00 22 E5a_E6a KnownJunction 0 9.93 6.25 18.24 9.49 21.39 111.24 25.31 20.58 107.44 31.16 23.90 30.61 0.00 30.73 0.00 39.99 30.57 103.59 4.71 3.07 59.86 35.82 51.64 23 ER6a ExonRegion 0 10.68 9.70 20.00 18.63 12.95 90.25 21.07 20.16 103.02 31.46 19.95 24.79 0.00 48.35 2.66 52.70 16.76 126.72 11.14 6.22 63.32 53.14 51.31 24 E6a_E7a KnownJunction 0 25.93 28.81 19.51 25.07 0.00 145.43 34.14 23.41 109.52 49.40 14.58 0.00 0.00 59.80 4.45 62.04 33.75 121.00 4.71 2.43 80.99 59.46 57.62 25 ER7a ExonRegion 0 15.10 18.68 32.50 30.31 21.14 162.55 26.25 26.17 119.57 43.51 26.09 41.64 2.46 62.53 4.11 76.28 19.67 92.60 10.17 4.08 92.57 75.63 68.13 26 E7a_E8a KnownJunction 0 28.23 23.75 20.25 18.68 7.89 122.03 43.10 18.61 100.98 46.58 37.75 47.57 6.82 32.32 4.45 64.77 34.78 79.76 14.21 3.00 79.08 48.25 42.25 27 ER8a ExonRegion 0 20.78 21.67 34.51 18.64 9.51 97.09 23.75 28.38 106.05 46.58 24.45 36.61 6.17 48.75 6.92 56.71 37.32 107.01 4.08 2.41 83.80 63.22 53.22 28 E8a_E9a KnownJunction 0 12.52 6.64 34.24 31.56 12.90 112.83 21.68 27.89 114.32 57.78 50.91 31.06 6.49 76.81 17.80 68.19 35.25 105.58 0.00 2.75 99.52 57.56 91.42 29 ER9a ExonRegion 0 18.73 20.19 37.92 33.21 33.54 121.21 36.26 24.80 128.45 52.67 32.69 42.38 14.85 61.99 5.14 79.62 33.91 102.50 3.72 5.77 79.41 69.83 73.18 30 E9a_E10a KnownJunction 0 34.90 32.82 44.82 46.55 66.04 175.07 43.10 29.45 202.92 64.04 27.48 78.78 26.30 61.04 5.81 124.84 42.64 122.87 24.00 14.64 90.57 110.53 62.14 31 ER10a ExonRegion 0 39.25 27.76 55.56 57.87 41.38 198.16 40.18 44.71 167.44 63.16 44.30 48.61 6.21 73.10 5.55 81.71 31.16 103.30 10.98 6.07 85.50 91.64 89.03 32 E10a_E11a KnownJunction 0 24.60 18.62 58.84 63.36 32.85 132.93 31.93 45.22 142.21 44.27 34.69 31.51 6.82 41.20 9.89 45.54 34.78 82.58 4.42 5.75 70.74 81.26 67.78 33 ER11a ExonRegion 0 16.93 24.01 44.56 57.39 44.52 140.07 39.27 48.73 164.03 56.05 37.14 61.99 27.04 61.44 5.06 65.01 33.78 95.97 9.29 8.42 91.29 114.64 77.35 34 E11a_E12a KnownJunction 0 29.78 32.43 33.82 58.70 54.07 129.02 42.44 45.92 140.51 52.27 31.74 87.33 24.84 68.34 4.45 99.63 33.66 116.48 18.26 9.27 79.01 141.57 75.63 35 ER12a ExonRegion 0 30.74 21.34 58.54 58.19 39.67 127.66 34.17 58.39 170.45 61.24 41.20 80.00 16.55 63.35 6.82 83.39 27.17 93.80 13.27 7.21 92.94 96.72 87.86 36 E12_Da NovelBoundary 0 9.85 3.35 14.58 3.13 0.00 0.00 4.15 9.12 14.84 2.36 4.37 31.06 6.01 4.94 0.00 8.20 0.00 5.14 3.95 0.00 2.72 5.76 3.50 37 E12a_E13a KnownJunction 0 36.82 40.98 58.63 56.07 67.49 185.52 52.91 65.60 190.85 65.92 37.96 104.58 6.17 86.23 10.14 69.04 21.51 132.49 35.48 11.95 122.26 92.77 70.77 38 ER13a ExonRegion 0 24.43 14.29 54.89 44.24 38.38 144.57 33.55 55.68 158.63 53.80 37.56 85.01 10.13 65.38 11.30 83.59 21.44 115.11 11.77 10.15 98.83 69.60 73.28 39 E13a_E14a KnownJunction 0 25.19 11.77 51.06 33.33 59.42 137.93 24.11 54.18 163.42 57.27 14.85 55.37 6.82 55.27 10.75 66.73 17.02 107.53 22.02 6.52 96.99 79.60 52.50 40 I13 Intron 0 8.74 3.27 8.81 3.88 6.96 16.16 5.97 4.92 16.75 3.01 3.40 6.39 1.48 1.92 0.78 12.95 0.76 7.58 1.46 0.33 9.60 4.33 6.29 41 I13_SR1 SilentIntronRegion 0 13.90 1.81 4.93 1.13 1.77 7.32 3.91 2.12 4.90 1.73 4.33 0.00 2.14 1.48 1.14 17.61 0.93 3.27 0.00 0.00 14.11 5.39 11.24 42 I13_SR2 SilentIntronRegion 1 21.17 10.17 16.15 4.34 5.84 20.34 5.18 14.30 23.69 4.27 3.87 4.33 4.69 0.44 0.00 23.24 0.00 11.93 3.19 0.00 4.01 12.31 5.07 43 I13_AR2 ActiveIntronRegion 0 7.68 2.81 16.30 4.76 8.63 21.30 6.16 6.49 19.98 4.26 3.63 4.72 0.41 0.33 1.00 14.73 0.00 9.56 2.02 0.00 10.68 4.99 7.65 44 E14_Aa NovelBoundary 0 23.71 0.00 24.60 8.09 7.47 12.55 2.25 15.65 16.35 7.44 2.63 0.00 7.63 4.89 0.00 7.43 12.62 12.97 0.00 0.00 8.83 0.00 8.11 45 ER14a ExonRegion 0 20.88 23.20 55.77 36.79 24.62 120.31 26.25 45.45 154.02 58.94 29.45 44.97 8.47 57.30 4.77 58.96 22.21 79.81 8.78 11.31 77.37 52.87 61.49 46 E14a_E15b KnownJunction 0 23.12 18.15 53.04 31.23 23.77 189.83 49.11 43.00 141.26 71.61 19.64 30.76 0.00 51.21 4.45 51.70 9.16 81.66 21.65 9.14 67.83 56.95 51.39 47 ER15a ExonRegion 0 5.92 0.42 4.97 1.30 3.55 7.46 5.46 1.84 9.32 2.10 1.15 1.41 0.02 3.92 0.01 5.61 1.22 1.73 2.06 0.41 3.40 4.62 2.35 48 E15_Ab KnownBoundary 0 14.22 0.00 6.30 1.60 3.23 7.38 0.00 2.55 12.85 0.00 5.00 0.00 0.00 2.94 0.00 8.29 0.00 3.56 4.61 0.00 0.00 2.88 0.00 49 ER15b ExonRegion 0 27.53 23.54 69.63 48.58 35.64 146.56 36.04 47.51 155.74 63.96 20.89 53.60 6.97 62.98 5.37 66.96 24.22 87.25 14.63 8.00 73.58 50.15 62.37 50 E15a_E16a KnownJunction 0 39.93 14.34 26.55 35.49 24.70 161.16 30.69 48.06 167.82 59.02 26.69 68.27 0.00 86.11 8.90 105.70 17.39 111.26 16.66 3.26 70.43 47.15 71.71 51 ER16a ExonRegion 0 20.53 13.70 55.79 32.09 26.87 124.47 26.48 39.97 140.43 61.12 29.23 44.43 7.73 68.04 3.92 66.90 15.23 83.68 9.22 8.21 82.66 58.85 49.43 52 E16a_E17a KnownJunction 0 30.52 31.44 58.84 37.26 30.65 147.24 50.57 50.69 118.11 52.27 26.85 55.82 6.33 38.02 4.45 36.57 4.58 78.35 7.34 8.50 76.67 45.25 56.51 53 ER17a ExonRegion 0 18.72 20.27 50.98 37.88 23.16 123.69 31.30 40.14 129.96 44.93 28.06 38.97 3.64 55.02 3.80 39.71 23.22 90.95 18.18 8.36 87.27 49.72 44.71 54 E17_Da KnownBoundary 0 24.00 38.09 69.45 52.34 36.84 110.22 32.24 51.06 182.58 69.09 23.11 17.56 6.82 57.39 9.77 50.41 22.35 123.66 23.91 12.85 86.86 60.38 52.67 55 ER17b ExonRegion 0 30.77 28.58 70.98 47.12 27.71 225.52 32.32 52.75 185.40 70.62 35.38 54.74 7.37 73.84 10.10 70.75 23.93 125.91 11.09 14.97 92.63 64.59 80.29 56 E17b_E18a KnownJunction 0 28.15 9.67 74.89 42.32 22.41 199.37 46.55 54.96 155.24 65.81 29.95 35.71 6.82 48.21 8.90 75.71 30.20 108.48 13.65 11.63 81.36 73.91 66.50 57 ER18a ExonRegion 0 28.02 17.99 41.68 35.78 42.93 154.54 26.55 39.13 104.08 47.43 29.74 26.68 5.17 54.78 1.81 42.47 18.00 100.00 7.49 7.02 80.11 59.39 55.90 58 E18_Da NovelBoundary 0 13.19 11.64 21.08 14.68 15.03 16.92 0.00 23.33 20.63 12.22 8.90 0.00 0.00 5.18 0.00 18.37 0.00 35.40 0.00 0.00 30.83 0.00 12.80 59 E18a_E19a KnownJunction 0 19.11 5.92 42.43 26.17 38.03 137.14 28.93 24.89 63.83 34.01 21.53 12.45 6.82 36.02 4.45 56.31 34.13 69.93 3.58 6.07 65.79 47.95 61.55 60 I18 Intron 0 11.07 3.25 17.73 12.35 10.28 19.96 8.48 12.64 24.55 7.29 4.54 5.30 0.41 6.44 0.87 26.00 5.99 19.21 0.68 0.91 14.81 10.45 16.29 61 I18_AR1 ActiveIntronRegion 0 11.19 3.71 18.89 13.01 10.79 20.40 9.24 14.03 27.37 8.15 5.03 5.30 0.12 6.21 0.75 28.41 6.27 21.21 0.70 1.04 15.73 10.63 16.53 62 I18_SR1 SilentIntronRegion 0 10.51 0.00 9.80 7.96 6.85 17.41 3.14 2.88 4.68 1.27 1.09 5.39 2.55 8.41 1.83 9.23 4.11 5.19 0.56 0.00 8.62 9.47 15.10 63 E19a_E20a KnownJunction 0 24.00 25.46 51.59 27.47 50.93 129.24 33.83 40.17 101.42 59.45 26.48 47.27 6.82 62.22 4.45 48.88 31.04 95.80 9.04 9.14 37.13 38.33 73.07 64 ER19a ExonRegion 0 15.34 12.20 48.75 24.43 31.92 119.92 28.99 29.01 93.60 56.89 21.19 27.37 5.53 49.65 3.11 51.91 35.01 106.18 7.05 10.33 57.22 40.93 65.03 65 ER20a ExonRegion 0 34.06 23.08 62.75 42.09 26.54 107.83 33.04 36.92 119.86 69.93 36.50 42.29 6.44 70.65 6.88 62.07 17.39 120.13 5.11 6.36 77.87 54.75 74.88 66 E20a_E21a KnownJunction 0 34.67 33.81 83.26 66.39 19.27 114.88 41.78 42.84 103.38 62.48 27.90 12.60 6.82 64.39 0.00 64.77 21.79 98.99 0.00 5.62 95.63 60.07 84.68 67 E21_Aa NovelBoundary 0 7.41 2.83 15.32 9.62 3.31 12.83 7.95 19.35 30.01 10.83 7.05 0.00 0.00 2.30 0.00 11.54 4.02 6.67 0.00 0.00 2.29 8.57 12.80 68 ER21a ExonRegion 0 40.44 20.50 84.70 57.96 21.83 143.62 24.56 50.72 122.04 62.83 41.59 23.32 9.22 66.03 6.08 74.93 32.66 123.02 8.19 7.60 87.61 62.89 71.77 69 E21a_E22a KnownJunction 0 47.19 18.75 101.42 66.03 40.58 240.43 26.32 62.35 150.06 63.29 25.22 23.71 0.00 67.81 14.59 58.96 16.92 136.63 9.04 3.26 105.89 93.32 50.88 70 ER22a ExonRegion 0 45.02 22.92 104.99 74.40 58.19 221.84 36.24 55.78 159.09 65.71 40.78 18.14 1.79 61.45 7.15 86.52 22.69 131.01 3.68 10.25 117.94 77.66 78.84 71 E22a_E23a KnownJunction 1 41.41 44.79 103.04 66.43 79.71 224.47 62.76 75.86 176.79 75.19 22.27 25.81 0.00 78.46 14.59 115.35 12.44 120.50 9.51 7.99 103.23 72.13 100.81 72 E23_Aa NovelBoundary 0 13.85 0.00 8.25 3.83 0.00 12.66 2.21 15.94 16.23 1.50 2.32 0.00 0.00 12.30 0.00 4.27 0.00 12.27 0.00 0.00 2.47 8.94 25.01 73 ER23a ExonRegion 0 47.54 36.55 105.25 71.83 55.05 183.79 40.82 62.96 193.13 78.94 37.06 33.99 9.50 67.14 6.99 104.58 20.48 101.66 8.93 8.15 104.93 89.01 73.40 74 E23_Da NovelBoundary 0 28.75 0.00 12.15 2.70 0.00 42.13 14.84 11.13 24.36 13.22 5.26 17.71 6.33 14.95 4.45 43.41 8.60 12.31 0.00 3.13 5.75 8.88 0.00 75 E23a_E24a KnownJunction 0 118.91 49.20 153.63 103.85 123.94 293.64 53.79 58.33 244.47 113.30 36.69 84.93 49.02 60.22 0.00 106.30 33.94 68.85 20.52 5.24 63.57 122.22 54.46 76 I23 Intron 0 25.80 2.53 7.72 2.53 7.32 36.04 6.26 5.13 10.99 6.38 4.81 5.32 3.09 6.80 2.25 13.31 1.64 5.26 0.79 0.53 4.39 12.44 2.92 77 I23_AR1 ActiveIntronRegion 0 28.28 2.77 8.44 2.77 8.03 39.47 6.86 5.62 12.05 6.94 5.27 5.83 3.39 7.45 2.47 14.57 1.80 5.77 0.87 0.58 4.78 13.64 3.20 78 E24_Aa NovelBoundary 0 27.78 20.79 35.42 15.42 19.44 71.55 18.90 15.57 33.04 6.42 12.21 12.45 6.82 7.53 0.00 32.73 13.56 4.02 4.61 12.91 3.15 14.63 4.10 79 ER24a ExonRegion 0 113.43 45.15 164.34 95.91 124.27 298.54 56.81 87.77 235.98 104.07 56.45 88.27 38.65 59.76 5.05 101.44 35.45 57.52 15.69 8.39 77.91 115.37 82.23 80 E24_Da KnownBoundary 0 153.88 79.85 212.71 121.70 138.96 360.13 72.52 133.00 246.44 109.19 58.65 132.04 40.74 89.53 13.85 120.48 44.32 67.40 14.40 17.00 67.77 134.84 105.94 81 E24a_E25b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 82 ER24b ExonRegion 0 90.09 56.91 223.38 138.47 90.26 365.51 86.24 110.11 266.53 110.49 47.16 109.29 18.04 96.22 12.68 159.35 43.97 105.91 12.95 17.73 79.81 151.62 115.06 83 E24b_E25a KnownJunction 1 74.46 41.24 202.51 158.52 57.22 327.48 90.09 86.21 261.37 82.79 37.96 146.45 39.28 63.51 8.90 151.50 31.60 95.30 4.80 5.50 55.85 130.49 64.02 84 I24 Intron 0 16.88 5.21 20.81 4.05 6.10 15.67 5.28 7.34 6.82 2.92 2.20 3.92 1.10 2.37 0.58 9.31 2.82 1.84 0.00 1.82 1.88 4.75 0.84 85 I24_AR1 ActiveIntronRegion 0 17.08 5.27 21.03 4.10 6.17 15.85 5.34 7.41 6.89 2.95 2.23 3.96 1.11 2.39 0.59 9.42 2.85 1.86 0.00 1.84 1.90 4.79 0.85 86 E25_Ab NovelBoundary 0 70.23 33.61 64.90 72.45 31.92 96.36 19.12 31.59 110.62 35.30 21.64 79.98 0.00 35.85 0.00 74.85 14.59 44.36 7.72 0.00 15.57 64.17 50.71 87 ER25a ExonRegion 0 62.73 38.27 180.35 146.32 59.84 287.91 63.91 78.72 248.82 77.68 50.08 122.01 26.86 65.85 6.86 138.88 28.81 99.44 10.14 4.84 49.08 124.06 83.29 88 ER25b ExonRegion 0 104.75 64.86 188.26 153.43 118.99 287.87 63.72 90.43 270.31 91.07 62.26 107.68 45.60 75.09 9.51 129.07 42.14 148.88 15.93 4.16 66.39 136.94 104.91 89 E25_Da KnownBoundary 0 138.77 105.05 219.51 147.73 155.01 335.60 89.43 99.73 263.86 99.63 60.07 154.85 81.98 107.48 11.25 153.04 54.32 174.48 7.72 2.62 81.73 159.76 137.86 90 ER25c ExonRegion 0 103.60 75.68 188.83 125.21 101.51 253.62 64.87 97.70 239.45 97.36 51.77 115.50 41.50 83.81 7.74 118.18 35.46 135.04 12.40 12.56 100.49 123.64 89.24 91 E25b_E26a KnownJunction 0 98.24 119.32 153.75 103.78 66.47 241.40 54.36 90.36 212.06 86.31 49.85 138.95 26.78 77.29 4.57 128.51 25.34 99.99 3.58 3.07 115.40 103.73 71.02 92 ER26a ExonRegion 0 175.20 66.51 201.24 119.06 129.31 258.33 81.42 91.58 159.03 73.82 29.73 75.15 15.02 49.08 9.50 56.26 13.49 46.16 7.88 7.99 42.33 83.77 44.41