Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RBBP9 Gene 0 22.06 46.04 32.13 44.05 52.58 152.63 43.02 48.65 59.13 54.00 82.34 44.46 63.89 61.52 37.88 44.76 93.00 39.21 50.12 40.47 30.06 45.38 28.78 2 337227 Transcript 0 15.81 23.81 14.99 21.71 29.86 94.42 22.55 23.73 25.91 24.12 42.17 17.33 25.51 30.14 22.32 28.18 52.17 26.71 30.07 19.55 20.19 22.67 22.91 3 339848 Transcript 0 0.00 0.00 20.55 28.80 0.00 0.00 0.00 35.94 45.63 50.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.65 0.00 0.00 0.00 0.00 0.00 4 493184 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 491835 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 8.67 5.87 0.46 2.44 7.88 52.49 4.67 4.37 3.05 3.55 19.47 0.16 0.00 9.53 8.05 18.00 27.78 17.85 16.23 7.35 20.08 8.61 20.50 7 E1_Ab KnownBoundary 0 7.56 10.06 0.00 3.23 12.82 124.70 2.25 2.51 3.59 2.74 31.85 0.00 0.00 14.36 11.37 34.52 32.63 28.52 24.00 16.30 27.86 21.86 38.67 8 E1_Ac KnownBoundary 0 0.00 3.35 0.00 2.06 0.00 5.79 0.00 4.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.84 2.57 0.00 0.00 3.15 0.00 0.00 9 E1_Ad KnownBoundary 1 11.78 23.02 12.54 10.42 15.11 359.22 59.13 6.41 13.54 36.67 105.50 0.00 0.00 16.66 26.58 82.03 195.70 61.10 36.90 39.88 62.40 31.66 50.36 10 ER1b ExonRegion 1 7.70 17.75 9.36 11.03 8.27 249.23 26.96 12.10 9.77 25.65 91.37 4.33 0.00 24.80 32.44 53.77 157.84 44.51 35.62 33.85 63.71 27.09 47.25 11 ER1c ExonRegion 1 10.58 26.78 11.03 12.27 8.03 330.08 44.57 12.10 11.73 30.39 108.24 4.33 0.00 28.69 41.10 66.38 196.95 49.89 44.60 43.97 80.44 38.55 51.88 12 ER1d ExonRegion 1 7.20 26.09 7.88 10.16 8.79 179.83 33.46 11.16 18.79 26.15 59.26 3.55 1.25 18.78 16.88 26.30 108.62 24.55 46.11 16.70 60.84 16.97 16.59 13 E1a_E2a KnownJunction 1 3.78 9.21 4.73 7.62 4.07 16.75 2.25 20.66 30.32 11.87 87.39 12.30 13.64 31.61 15.95 0.00 160.36 9.20 27.67 12.27 63.20 11.08 16.30 14 E1a_E3a KnownJunction 0 0.00 0.00 1.30 1.73 4.16 0.00 2.21 0.00 3.50 4.19 0.00 0.00 0.00 4.77 0.00 0.00 7.95 8.79 4.42 0.00 6.18 8.27 0.00 15 E2_Aa NovelBoundary 0 3.11 8.81 5.14 17.98 0.00 28.62 4.28 2.55 3.33 9.78 7.26 0.00 6.01 0.00 0.00 8.72 0.00 10.57 3.76 8.56 0.00 0.00 0.00 16 ER2a ExonRegion 1 6.20 3.50 5.78 11.25 2.12 19.45 0.62 16.64 32.97 31.07 149.33 16.81 22.25 40.83 30.63 22.19 246.34 24.84 28.74 28.65 104.24 14.68 25.34 17 E2_Da NovelBoundary 0 14.82 12.04 7.86 4.13 4.33 22.03 4.50 2.14 3.15 6.15 2.26 0.00 0.00 2.47 0.00 4.36 16.92 2.11 0.00 3.00 0.00 2.45 7.94 18 E2a_E3a KnownJunction 1 14.37 5.46 4.82 12.29 3.90 15.28 0.00 18.98 32.70 46.10 154.83 23.71 25.00 46.74 38.94 46.65 229.08 28.48 29.27 48.90 106.07 14.82 35.51 19 E3_Aa NovelBoundary 0 8.96 33.15 32.52 23.47 34.38 13.23 1.68 6.20 5.87 5.53 4.74 7.05 6.82 4.59 19.66 3.76 4.77 3.73 8.47 5.88 3.15 4.78 0.00 20 ER3a ExonRegion 1 7.21 26.90 24.21 33.63 16.74 48.20 10.27 31.52 65.47 54.67 117.00 21.08 29.78 71.34 48.42 81.76 125.28 78.51 61.09 59.25 68.86 49.14 54.85 21 E3a_E4a KnownJunction 1 13.48 36.64 34.77 31.60 30.14 106.13 10.86 48.92 77.37 37.53 110.03 18.91 54.54 69.69 38.82 54.69 85.93 95.96 84.61 72.93 73.02 37.47 29.79 22 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER4a ExonRegion 0 17.35 42.35 22.67 34.17 56.75 346.99 36.98 33.89 65.15 44.21 139.84 44.20 48.97 117.28 42.47 67.36 139.41 74.94 76.63 57.87 75.85 41.26 32.85 24 E4a_E5a KnownJunction 0 10.89 45.91 15.08 34.16 51.87 325.38 54.41 38.16 45.34 34.63 84.55 36.61 31.65 103.71 33.75 58.53 128.66 37.72 45.08 31.38 74.50 41.39 30.56 25 ER5a ExonRegion 0 13.32 65.35 24.38 25.62 40.52 189.30 59.72 42.95 70.27 61.12 108.06 41.48 57.50 121.67 40.47 53.67 141.11 44.95 52.55 69.71 76.50 54.40 26.01 26 E5_Da KnownBoundary 0 0.00 26.77 9.88 16.51 28.27 87.05 35.99 21.11 20.40 21.03 38.54 17.71 21.91 38.02 5.07 18.63 53.48 18.07 20.61 5.69 21.00 7.72 4.35 27 E5a_E5b KnownJunction 0 0.00 0.00 20.55 28.80 0.00 0.00 0.00 35.94 45.63 50.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.65 0.00 0.00 0.00 0.00 0.00 28 E5_Ab KnownBoundary 1 9.11 16.97 21.82 35.06 42.70 132.08 23.14 39.88 56.83 36.37 56.91 30.76 54.87 47.09 9.64 39.31 64.61 35.94 29.93 53.31 38.30 25.47 3.33 29 ER5b ExonRegion 0 14.82 44.33 33.82 54.52 65.82 230.69 60.37 65.34 80.78 70.88 113.27 66.67 103.18 134.80 42.36 70.74 147.88 53.58 59.25 77.02 63.47 59.17 24.08 30 ER5c ExonRegion 0 22.08 41.67 57.37 58.08 64.26 187.84 46.05 73.90 105.84 94.43 135.33 74.13 109.89 125.43 56.28 76.50 143.36 62.11 86.05 89.46 70.21 64.56 36.41 31 E5_Db KnownBoundary 0 26.67 60.19 81.93 58.77 51.36 155.48 81.70 89.29 137.32 123.16 142.51 106.83 111.19 99.71 74.79 137.91 121.18 64.05 159.44 137.42 57.51 98.16 71.45 32 ER5d ExonRegion 0 27.67 84.05 63.98 87.37 83.97 245.01 71.42 97.39 136.74 112.34 147.29 118.31 145.10 98.47 47.15 72.30 130.08 43.27 80.76 77.75 30.75 109.96 41.15 33 E5_Dc KnownBoundary 1 18.82 101.89 34.09 73.32 93.04 228.50 52.47 105.97 83.77 122.09 132.51 63.47 234.08 82.58 53.90 67.08 127.63 30.51 82.92 68.39 23.04 94.24 38.84 34 ER5e ExonRegion 0 32.82 78.54 49.04 70.33 82.98 189.93 67.31 100.61 90.26 111.62 158.83 111.12 197.20 108.98 46.56 62.99 149.43 52.54 72.00 73.56 51.48 78.61 49.60 35 E5_Dd KnownBoundary 1 45.27 151.55 51.36 58.93 90.58 317.15 105.42 94.31 94.15 105.08 169.46 111.94 139.28 154.39 29.05 57.25 134.74 71.34 91.96 84.37 66.47 71.95 53.18 36 ER5f ExonRegion 0 22.96 41.76 29.53 40.98 51.85 136.36 40.42 43.09 48.77 44.68 64.87 34.50 51.03 50.76 36.59 38.36 76.57 35.58 43.92 31.75 20.30 36.73 25.31