Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MAVS Gene 0 88.30 50.29 110.57 80.78 73.36 98.22 70.84 93.36 97.42 122.64 89.72 65.35 71.20 168.07 191.47 196.20 157.73 149.79 159.51 94.16 247.52 114.38 172.09 2 441852 Transcript 1 19.56 11.16 13.24 8.90 9.35 6.63 4.33 7.20 4.14 11.37 0.00 5.89 8.59 1.57 17.50 10.32 2.46 5.48 11.57 7.91 8.00 2.55 5.12 3 356687 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 416600 Transcript 1 3.78 0.00 7.69 4.96 4.33 2.90 0.00 4.35 4.14 6.02 9.53 0.00 13.31 19.37 22.99 35.29 0.00 10.69 48.47 11.76 3.15 5.33 40.12 5 428216 Transcript 0 45.92 31.81 54.04 30.30 26.54 58.09 48.15 34.63 35.75 48.04 40.47 39.42 74.25 84.17 121.89 111.43 74.87 55.45 79.17 41.11 131.27 56.84 77.71 6 358134 Transcript 0 3.33 5.85 3.40 1.66 4.33 11.19 0.00 2.55 8.56 1.16 4.69 6.30 0.00 4.59 9.39 11.28 0.00 10.86 21.27 2.62 23.41 11.14 16.65 7 IG24_SR1 SilentIntergenicRegion 0 9.49 7.44 9.62 12.12 13.67 13.72 7.10 11.38 10.45 12.18 3.18 4.37 4.98 5.70 9.86 13.06 7.32 15.10 11.28 12.90 17.59 7.28 23.37 8 ER1a ExonRegion 0 83.92 15.38 25.25 12.62 23.15 48.56 41.39 11.65 12.89 16.90 18.49 2.26 2.04 85.37 107.72 128.71 74.77 23.38 87.67 34.23 54.71 58.52 154.49 9 ER1b ExonRegion 1 168.32 36.18 50.30 24.07 45.98 118.38 85.01 34.43 34.23 50.98 56.77 4.90 20.86 140.44 175.22 265.07 151.23 77.27 216.27 79.34 146.49 91.89 354.56 10 E1a_E2a KnownJunction 0 196.11 34.47 85.77 40.22 32.09 90.18 86.65 66.05 68.20 87.19 78.70 5.55 13.15 90.53 168.74 213.62 107.43 122.91 290.08 66.99 140.54 47.33 326.17 11 E2_Aa NovelBoundary 0 54.31 6.64 22.26 18.38 12.14 27.94 10.91 14.62 10.50 10.37 0.00 0.00 6.66 2.47 8.90 0.00 12.90 12.06 4.52 3.26 4.82 0.00 15.88 12 ER2a ExonRegion 0 50.75 15.33 86.60 41.99 32.92 56.41 27.62 76.78 75.99 91.07 89.45 51.01 47.28 111.89 152.93 176.95 139.95 98.86 215.69 94.55 244.12 79.49 211.25 13 E2a_E3a KnownJunction 1 15.11 11.51 89.83 56.94 6.96 32.20 16.43 93.65 97.86 109.70 41.80 54.17 72.40 159.99 220.90 300.60 82.66 159.02 303.16 108.40 142.64 72.38 372.10 14 E2a_E4a KnownJunction 1 3.78 0.00 7.69 4.96 4.33 2.90 0.00 4.35 4.14 6.02 9.53 0.00 13.31 19.37 22.99 35.29 0.00 10.69 48.47 11.76 3.15 5.33 40.12 15 ER3a ExonRegion 1 14.37 6.27 77.39 44.62 24.42 51.14 14.29 76.05 75.43 86.94 70.12 64.94 93.67 127.56 215.42 277.81 96.37 145.38 238.95 89.86 183.43 93.90 249.94 16 E3_Da KnownBoundary 0 20.30 8.75 51.86 36.86 65.11 108.01 35.77 64.40 85.62 86.66 87.07 94.98 86.68 135.03 156.01 144.06 93.97 146.83 161.79 60.21 183.79 128.47 118.40 17 E3a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3b ExonRegion 0 31.42 18.50 72.42 30.22 33.75 81.70 62.61 66.07 72.42 86.70 91.82 65.49 74.90 140.51 167.96 98.40 130.59 75.69 118.82 59.68 225.91 89.21 85.68 19 E3_Db KnownBoundary 0 38.45 5.85 10.85 7.76 4.33 5.79 2.25 24.03 12.90 17.38 0.00 0.00 7.14 4.59 0.00 10.42 3.74 13.85 8.85 5.88 8.09 0.00 11.95 20 E3b_E4a KnownJunction 0 55.79 38.22 74.54 26.54 16.30 69.68 55.87 46.74 54.08 70.83 64.86 46.07 98.53 124.55 173.68 166.71 90.04 79.55 107.96 60.34 204.11 81.56 86.81 21 E3b_E5a KnownJunction 0 3.33 5.85 3.40 1.66 4.33 11.19 0.00 2.55 8.56 1.16 4.69 6.30 0.00 4.59 9.39 11.28 0.00 10.86 21.27 2.62 23.41 11.14 16.65 22 ER3c ExonRegion 0 19.56 11.16 13.24 8.90 9.35 6.63 4.33 7.20 4.14 11.37 0.00 5.89 8.59 1.57 17.50 10.32 2.46 5.48 11.57 7.91 8.00 2.55 5.12 23 E3_Dc NovelBoundary 0 13.63 0.00 18.12 20.98 40.92 27.14 18.50 12.28 13.51 15.74 0.00 0.00 6.82 4.94 24.11 23.84 3.65 24.33 18.45 12.21 5.07 0.00 4.35 24 ER4a ExonRegion 0 101.37 25.85 79.90 40.51 33.52 58.77 36.54 77.01 84.69 93.17 103.35 62.06 78.29 164.85 173.62 185.17 144.61 137.46 155.94 79.84 248.28 101.00 135.15 25 E4a_E5a KnownJunction 0 141.28 13.42 98.58 34.59 34.38 63.54 17.27 84.74 95.14 122.20 101.66 104.73 112.01 177.53 214.23 271.13 193.36 200.30 217.04 97.03 271.57 136.18 161.25 26 I4_AR2 ActiveIntronRegion 0 6.84 4.22 7.35 5.98 9.47 1.97 3.26 8.64 1.52 15.44 1.04 0.00 15.87 0.00 8.70 0.00 3.30 4.69 2.94 5.40 6.61 0.00 2.94 27 ER5a ExonRegion 0 53.22 25.10 88.44 42.68 24.67 60.01 40.88 92.54 101.03 112.94 118.17 80.15 45.08 193.54 183.45 207.94 208.93 165.73 144.95 109.44 281.98 101.21 157.04 28 E5a_E6a KnownJunction 0 75.72 34.80 96.45 40.09 24.36 88.36 54.67 79.85 114.96 100.14 146.62 68.27 26.13 139.09 146.36 170.55 215.43 120.67 104.57 142.09 269.91 122.77 126.42 29 I5 Intron 0 11.32 11.93 14.79 25.20 17.59 10.35 9.88 20.09 9.71 30.92 3.09 5.59 4.33 5.64 13.22 14.90 12.63 23.10 13.85 14.78 6.06 2.01 9.60 30 I5_AR1 ActiveIntronRegion 0 11.97 11.84 15.73 27.88 18.15 11.52 10.41 21.54 10.41 33.28 3.30 5.93 4.05 5.93 14.21 15.33 12.77 25.68 14.84 15.31 5.78 2.25 10.51 31 ER6a ExonRegion 0 49.35 32.17 121.23 73.97 50.58 95.95 53.51 108.72 125.13 156.58 145.62 84.01 94.65 244.42 272.15 271.90 235.85 196.28 177.66 129.87 364.86 140.10 200.19 32 E6_Da NovelBoundary 1 6.89 11.58 29.48 42.15 15.45 20.27 15.90 28.34 28.99 51.90 10.16 12.60 39.28 26.02 45.24 24.44 16.27 30.76 42.82 33.11 40.22 26.39 36.28 33 E6a_E7a KnownJunction 1 113.35 24.14 100.65 53.74 46.69 137.19 29.54 88.10 108.45 99.17 116.71 60.32 158.76 190.24 327.46 264.20 251.99 202.54 198.12 97.99 410.08 169.68 221.26 34 I6 Intron 0 10.26 10.09 17.19 25.14 13.43 11.09 12.69 21.01 16.80 34.42 5.84 7.61 10.14 14.26 28.46 24.25 17.89 29.02 19.99 16.75 30.92 11.77 20.27 35 I6_AR1 ActiveIntronRegion 0 10.28 10.12 17.23 25.20 13.46 11.11 12.72 21.06 16.84 34.49 5.86 7.63 10.16 14.29 28.52 24.30 17.93 29.08 20.03 16.79 30.99 11.79 20.32 36 E7_Aa NovelBoundary 0 52.31 12.76 46.95 31.50 19.52 27.77 10.11 11.62 17.13 41.64 5.26 0.00 6.82 12.18 4.45 16.06 33.29 23.67 28.61 13.74 29.10 12.37 8.62 37 ER7a ExonRegion 0 41.01 33.21 94.32 65.59 43.62 76.86 50.02 80.91 87.81 117.40 96.90 39.16 44.07 184.52 202.56 187.64 156.69 161.61 125.23 92.85 255.56 110.00 160.68 38 E7_Ab KnownBoundary 0 77.27 31.24 112.59 68.89 70.97 104.26 71.59 80.59 107.17 124.75 70.39 11.70 25.97 212.02 225.97 191.40 132.68 177.54 123.49 124.38 247.29 102.81 170.21 39 ER7b ExonRegion 0 85.61 54.70 123.50 86.73 81.28 113.42 91.12 93.24 119.32 153.24 114.86 43.83 44.29 217.44 202.08 212.55 178.89 173.90 156.76 119.34 293.33 113.54 171.85 40 E7_Da KnownBoundary 0 23.78 40.58 123.41 102.62 110.61 108.35 93.23 81.49 102.63 128.48 67.75 44.71 60.22 174.41 204.96 136.12 136.98 136.55 89.23 141.26 195.90 99.81 114.73 41 ER7c ExonRegion 0 102.60 68.24 141.47 113.82 114.00 116.94 99.82 116.06 116.74 156.34 77.28 60.48 53.07 181.31 177.88 184.61 126.39 147.55 152.45 113.34 198.63 138.57 174.51 42 E7_Db KnownBoundary 0 191.66 66.76 166.97 122.40 214.18 188.81 173.25 104.37 107.75 140.54 60.23 73.67 34.41 114.25 145.50 110.23 130.72 86.47 159.35 93.70 154.57 187.13 141.79 43 ER7d ExonRegion 1 203.02 109.07 172.98 147.94 159.75 168.85 133.67 141.12 134.12 163.20 78.82 113.53 122.98 167.50 208.82 236.12 173.90 181.77 233.13 105.06 270.97 156.77 220.10 44 E7_Dc KnownBoundary 1 133.43 52.23 121.23 138.54 198.81 106.19 116.32 80.46 57.46 77.60 60.23 104.58 114.28 128.73 175.04 152.69 123.98 70.22 223.54 54.27 132.27 72.32 184.04 45 ER7e ExonRegion 1 36.05 25.40 33.53 34.05 36.78 46.51 40.44 22.53 17.41 25.25 16.07 32.77 49.96 43.79 70.10 56.15 59.71 31.35 50.39 21.88 58.42 32.13 68.60 46 IG25 Intergenic 0 72.29 52.64 68.81 80.38 81.26 72.57 49.92 64.57 53.22 64.41 27.43 35.65 43.23 54.37 76.24 73.57 55.78 57.43 69.83 50.76 74.67 49.08 66.81 47 IG25_SR1 SilentIntergenicRegion 0 30.02 9.43 17.43 17.17 43.06 26.51 17.32 17.56 8.53 14.92 10.02 18.89 24.83 39.92 53.99 90.78 28.81 26.07 76.45 15.67 43.25 35.80 80.89 48 IG25_AR1 ActiveIntergenicRegion 0 187.24 70.26 169.55 126.35 110.67 125.82 80.94 132.42 108.09 119.95 66.95 39.64 42.81 120.58 188.99 155.53 126.41 129.70 134.67 105.15 205.50 110.24 146.35 49 IG25_SR2 SilentIntergenicRegion 0 48.80 39.78 7.65 15.61 125.25 111.46 59.20 21.59 23.15 11.94 44.56 72.47 78.25 54.93 62.83 56.06 96.86 3.87 48.96 31.22 84.68 93.16 55.43 50 IG25_AR5 ActiveIntergenicRegion 0 121.02 91.65 156.95 143.81 139.07 151.95 101.12 134.80 119.18 124.12 76.69 81.55 90.22 138.26 171.64 178.04 135.56 128.91 146.06 92.79 211.46 118.25 177.16 51 IG25_AR6 ActiveIntergenicRegion 0 108.41 87.26 106.11 117.21 136.93 132.50 87.33 86.55 71.30 87.34 39.38 55.60 71.48 79.02 104.41 94.76 78.15 67.74 107.22 70.18 104.45 83.54 95.71 52 IG25_SR6 SilentIntergenicRegion 0 21.17 17.22 11.56 26.76 31.04 15.22 12.94 22.04 17.01 24.41 2.46 8.92 14.33 8.71 17.47 18.58 10.59 18.44 19.97 19.12 6.01 3.98 11.05 53 IG25_AR7 ActiveIntergenicRegion 0 23.71 28.97 20.76 50.90 50.54 23.23 18.93 31.29 33.36 32.22 2.73 18.11 17.83 12.65 18.02 16.79 14.60 27.12 21.49 23.14 3.70 7.11 11.78 54 IG25_SR7 SilentIntergenicRegion 0 37.34 43.52 23.85 73.49 45.42 23.03 22.74 39.60 26.17 49.48 5.86 23.81 29.31 16.76 30.62 34.41 20.38 35.82 29.32 34.15 7.21 8.15 14.45