Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC4A11 Gene 0 4.25 0.71 3.17 2.97 1.11 2.92 1.24 2.04 1.84 1.46 20.42 1.95 20.29 30.84 27.94 7.78 5.14 5.94 4.75 2.15 25.59 14.26 14.62 2 437836 Transcript 0 0.26 0.00 0.00 0.00 0.00 1.10 0.00 0.00 0.00 0.00 1.78 0.00 0.00 1.58 4.89 0.97 0.41 1.02 0.00 0.00 3.19 1.20 2.04 3 474451 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.72 0.18 0.00 0.00 2.29 0.00 0.34 2.22 4.66 0.00 0.00 0.96 0.00 0.00 3.53 0.00 2.79 4 380059 Transcript 0 0.79 0.19 0.51 0.57 0.00 0.17 0.25 0.00 0.51 0.16 4.13 0.00 1.05 3.98 2.51 0.83 0.62 0.26 0.00 0.20 2.46 1.16 1.91 5 380056 Transcript 0 3.92 0.32 1.62 1.02 2.77 4.60 0.96 1.22 0.24 0.35 4.72 0.00 0.03 12.29 6.69 0.00 2.43 1.70 3.80 0.78 10.07 8.71 3.25 6 470631 Transcript 0 2.24 0.00 1.06 0.83 0.30 1.11 0.70 0.58 0.94 0.69 8.47 0.05 2.45 8.68 6.08 3.64 0.58 2.51 0.74 0.76 8.05 0.67 1.09 7 488544 Transcript 0 0.05 0.00 0.04 0.05 0.00 0.04 0.02 0.02 0.00 0.93 2.68 0.00 1.19 0.96 1.92 0.11 0.08 0.07 0.08 2.51 1.12 0.15 0.11 8 IG11_AR2 ActiveIntergenicRegion 0 0.00 0.17 0.00 0.90 0.23 0.31 1.01 0.00 0.63 0.29 0.45 0.97 1.38 6.63 16.24 0.93 0.28 3.06 1.85 0.38 14.32 0.62 5.29 9 ER1a ExonRegion 0 0.53 0.00 0.00 0.00 0.00 2.20 0.00 0.00 0.00 0.00 0.87 0.00 0.00 0.81 3.48 1.93 0.83 0.00 0.00 0.00 3.42 2.40 0.15 10 ER1b ExonRegion 0 1.02 0.00 0.00 0.00 0.00 2.49 0.71 0.73 0.00 0.00 4.46 0.00 0.84 7.52 9.19 5.98 5.14 1.83 0.00 0.00 10.32 7.22 6.74 11 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 0.00 0.00 0.00 6.82 2.47 0.00 0.00 0.00 2.36 0.00 0.00 0.00 0.00 0.00 12 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 2.35 6.30 0.00 0.00 2.03 0.00 0.00 2.97 0.00 3.93 13 ER1c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.53 0.00 0.00 1.71 0.00 1.02 1.71 2.72 0.00 0.00 1.22 0.00 0.00 1.95 0.00 0.00 14 E1b_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 I1_AR2 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 0.00 2.03 0.73 0.00 0.63 0.00 5.38 0.00 5.66 6.58 6.40 0.00 1.83 0.00 5.30 0.00 9.44 2.31 0.70 16 ER2a ExonRegion 0 1.58 0.38 1.02 1.13 0.00 0.34 0.49 0.00 1.03 0.32 5.62 0.00 2.11 7.96 5.02 1.66 1.24 0.51 0.00 0.40 4.92 2.33 3.83 17 E2_Da NovelBoundary 0 0.00 0.00 0.00 5.86 4.16 5.28 4.50 0.00 0.00 0.00 4.79 0.00 6.82 7.42 5.19 0.00 4.30 0.00 0.00 0.00 13.34 0.00 4.10 18 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 I2 Intron 0 0.65 0.00 1.13 0.00 0.00 0.57 0.41 0.00 0.57 0.00 4.78 0.00 1.19 6.79 7.07 0.92 4.08 0.85 0.00 1.32 9.54 3.86 0.91 20 I2_AR1 ActiveIntronRegion 0 0.00 0.00 1.07 0.00 0.00 0.00 0.00 0.00 0.89 0.00 3.36 0.00 0.00 8.46 3.79 2.11 2.80 0.00 0.00 0.00 7.80 3.15 1.47 21 I2_SR1 SilentIntronRegion 0 1.19 0.00 1.20 0.00 0.00 1.03 0.74 0.00 0.33 0.00 6.01 0.00 2.16 5.62 9.82 0.00 5.19 1.54 0.00 2.38 11.12 4.51 0.48 22 E3_Aa NovelBoundary 0 3.48 0.00 1.54 2.90 0.00 5.79 0.00 0.00 0.00 1.67 5.32 0.00 0.00 9.12 0.00 0.00 4.77 0.00 0.00 0.00 14.52 0.00 8.71 23 ER3a ExonRegion 0 3.92 0.32 1.62 1.02 2.77 4.60 0.96 1.22 0.24 0.35 4.72 0.00 0.03 12.29 6.69 0.00 2.43 1.70 3.80 0.78 10.07 8.71 3.25 24 E3_Ab KnownBoundary 0 0.00 3.35 3.64 3.43 3.40 8.69 0.00 2.18 3.33 1.67 12.06 0.00 0.00 19.42 23.12 0.00 0.00 0.00 4.14 0.00 21.93 9.61 8.28 25 ER3b ExonRegion 0 5.00 2.03 2.98 1.52 0.49 2.54 1.17 1.73 2.44 1.41 23.50 0.00 5.12 19.78 15.36 5.81 3.45 6.22 2.68 0.00 18.23 4.59 12.88 26 E3a_E4a KnownJunction 0 13.56 3.03 4.67 0.00 0.00 0.00 4.42 1.64 3.04 1.40 16.90 0.00 0.00 27.72 13.72 17.09 0.00 7.42 0.00 0.00 17.61 3.06 15.71 27 ER4a ExonRegion 0 6.07 0.48 2.16 3.66 1.26 3.93 1.51 1.94 3.12 0.92 24.32 3.37 12.54 34.03 20.61 7.15 7.08 4.92 6.02 0.18 24.04 18.45 13.28 28 E4a_E5a KnownJunction 0 3.48 0.00 1.83 2.06 4.33 5.11 1.77 0.00 4.37 2.74 22.32 0.00 20.62 37.20 24.60 7.09 8.23 0.00 4.52 2.81 11.68 17.94 7.94 29 ER5a ExonRegion 0 4.02 1.91 3.48 1.17 1.61 4.73 1.77 3.18 3.24 1.70 24.39 2.86 21.29 32.09 22.86 16.29 2.11 2.07 1.08 4.60 20.85 14.92 8.16 30 E5a_E6a KnownJunction 0 3.78 0.00 3.43 0.00 0.00 8.35 2.25 6.16 1.68 0.00 34.06 6.30 29.54 48.91 15.20 29.56 0.00 2.45 0.00 3.26 22.49 19.04 8.02 31 ER6a ExonRegion 0 3.64 0.48 2.50 3.45 0.84 4.71 0.73 2.13 3.35 3.11 20.85 1.87 23.53 39.25 35.32 8.13 4.04 7.29 4.64 3.56 39.06 14.85 13.19 32 E6a_E7a KnownJunction 0 10.00 0.00 4.38 6.06 4.33 0.00 0.00 1.64 1.68 9.08 30.64 0.00 26.30 41.20 27.57 7.43 8.51 10.16 4.52 8.82 38.61 19.66 12.21 33 ER7a ExonRegion 0 3.90 0.00 1.78 4.09 1.21 2.26 0.00 1.41 2.62 3.26 16.81 0.00 18.30 31.04 26.64 4.35 5.23 9.80 4.04 5.03 26.42 8.31 8.13 34 E7a_E8a KnownJunction 0 2.82 0.00 0.00 5.73 3.23 8.12 0.00 0.00 1.16 2.47 14.16 0.00 27.43 46.09 9.15 8.72 7.67 6.80 4.61 2.94 16.37 11.45 16.65 35 ER8a ExonRegion 0 8.07 1.94 0.70 4.42 1.92 4.14 0.36 1.06 1.61 1.29 26.98 3.25 29.62 33.83 27.59 13.73 3.91 11.85 9.61 3.57 30.44 9.71 14.52 36 E8a_E9a KnownJunction 0 11.34 3.09 0.00 1.63 0.00 10.90 1.99 0.00 0.00 0.00 24.59 0.00 39.45 49.09 27.69 4.02 4.21 14.47 0.00 6.26 14.21 15.43 35.94 37 ER9a ExonRegion 0 2.92 0.33 1.07 1.76 0.35 6.42 2.09 1.20 1.53 1.63 25.06 1.01 34.80 46.42 39.16 10.15 5.79 10.33 12.39 1.81 32.92 23.75 28.54 38 E9a_E10a KnownJunction 0 3.41 0.00 1.71 0.00 4.33 11.36 2.25 0.00 2.75 2.58 26.64 0.00 52.92 53.74 56.62 0.00 15.61 6.63 0.00 3.26 56.34 25.78 52.24 39 ER10a ExonRegion 0 5.79 0.00 2.31 0.41 2.22 8.90 1.92 0.83 2.30 1.94 35.66 0.00 44.85 50.26 31.11 9.36 11.13 10.71 4.71 1.54 59.10 23.81 40.08 40 E10a_E11a KnownJunction 0 10.00 0.00 3.52 1.96 0.00 7.95 0.00 4.89 3.47 3.06 30.96 5.55 47.56 53.80 35.97 15.04 13.93 14.05 22.87 2.49 42.13 47.64 53.52 41 ER11a ExonRegion 0 3.16 0.82 6.03 1.80 1.38 4.35 4.02 2.51 1.63 0.54 34.03 6.87 41.43 44.62 44.76 7.15 7.75 8.01 5.87 1.32 41.38 23.61 24.03 42 E11a_E12a KnownJunction 0 2.89 0.00 3.64 3.70 3.82 0.00 2.21 0.00 2.95 0.00 29.11 6.30 32.79 47.91 31.77 7.86 8.42 6.09 9.13 3.20 40.96 23.39 19.04 43 E11a_E13a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.27 0.00 44 ER12a ExonRegion 0 4.68 1.82 3.65 3.26 1.10 2.51 0.82 2.80 2.05 1.53 22.09 2.32 30.65 32.65 24.92 12.93 5.10 8.44 2.88 0.95 32.67 17.42 18.70 45 E12a_E13a KnownJunction 0 3.41 0.00 5.17 7.86 3.48 8.69 0.00 6.24 1.79 0.00 14.06 0.00 28.57 25.49 46.23 16.06 0.00 4.60 0.00 3.20 16.87 5.63 16.05 46 ER13a ExonRegion 0 7.79 0.51 4.04 5.33 2.80 2.52 1.99 6.29 3.69 1.47 21.17 6.20 33.15 51.64 33.53 15.37 6.98 8.29 4.42 1.96 38.24 31.18 19.09 47 E13_Ab KnownBoundary 0 14.22 3.35 5.74 8.42 0.00 2.90 6.05 4.27 4.66 2.90 38.33 0.00 32.95 54.09 22.99 29.99 13.93 16.46 12.89 0.00 19.46 38.15 21.00 48 ER13b ExonRegion 0 6.63 1.31 4.00 5.72 1.49 2.28 5.21 4.69 2.09 1.61 43.86 8.27 55.66 48.69 40.88 16.05 7.26 16.05 8.64 2.27 32.32 25.97 18.66 49 E13_Da KnownBoundary 0 7.33 0.00 1.42 7.33 0.00 0.00 2.16 0.00 0.00 0.00 10.21 0.00 6.82 7.42 18.67 0.00 0.00 2.07 0.00 2.75 10.63 3.12 3.24 50 E13a_E13c KnownJunction 0 0.00 0.00 3.43 3.96 4.33 5.74 2.25 6.12 0.00 1.48 39.33 13.95 28.08 46.32 49.32 15.98 8.42 11.48 9.51 3.07 32.31 23.51 29.11 51 ER13c ExonRegion 0 2.24 0.00 1.06 0.83 0.30 1.11 0.70 0.58 0.94 0.69 8.47 0.05 2.45 8.68 6.08 3.64 0.58 2.51 0.74 0.76 8.05 0.67 1.09 52 E13_Ac KnownBoundary 0 3.48 0.00 1.21 0.00 8.66 0.00 0.00 0.00 1.79 0.00 2.05 0.00 6.82 9.48 5.32 0.00 4.21 0.00 0.00 0.00 14.09 0.00 7.77 53 ER13d ExonRegion 0 1.97 0.00 4.26 3.40 1.76 1.73 4.93 7.88 2.45 0.90 32.91 8.54 35.66 55.33 33.15 20.19 19.49 10.00 9.03 1.95 32.30 23.38 25.87 54 E13b_E14a KnownJunction 1 0.00 0.00 8.87 7.16 0.00 0.00 0.00 4.81 1.79 0.00 9.27 13.05 55.68 43.97 27.57 15.81 13.37 8.17 0.00 0.00 30.33 25.11 12.63 55 E13b_E14b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 5.16 0.00 0.00 2.47 11.25 0.00 0.00 1.66 0.00 0.00 8.65 0.00 8.37 56 ER14a ExonRegion 0 4.47 1.69 9.82 9.06 2.04 1.32 2.59 4.70 1.84 2.04 36.21 5.85 33.56 54.58 40.25 12.18 15.06 12.05 6.10 0.96 35.66 31.66 18.61 57 E14_Ab KnownBoundary 0 3.11 0.00 7.21 4.73 0.00 7.50 1.99 5.01 3.56 1.40 32.06 7.65 12.82 43.85 57.61 4.10 24.78 16.00 13.84 3.26 37.00 14.63 15.28 58 ER14b ExonRegion 0 5.56 2.03 7.42 5.53 3.82 2.72 0.72 6.52 3.67 0.66 33.63 3.46 11.26 42.83 40.45 2.63 11.03 14.20 12.47 1.16 44.26 18.22 21.65 59 E14_Da KnownBoundary 0 13.48 2.57 3.67 5.46 7.64 2.16 0.00 5.09 1.79 0.00 32.06 0.00 31.65 24.19 16.44 3.93 9.26 9.53 17.13 0.00 35.03 25.41 32.95 60 ER14c ExonRegion 0 6.51 1.19 5.64 2.70 1.75 1.27 0.41 2.68 2.07 0.56 20.43 4.09 24.22 40.46 33.30 5.44 6.94 8.22 6.54 1.74 37.45 19.57 15.40 61 E14b_E15a KnownJunction 0 3.26 5.85 7.69 5.93 0.00 0.00 0.00 1.56 1.79 0.00 19.32 0.00 13.31 41.97 28.80 8.20 12.44 1.74 12.24 3.13 31.44 20.27 27.57 62 ER15a ExonRegion 0 3.70 1.43 4.70 3.32 0.10 1.85 3.14 2.00 1.34 1.14 23.38 3.60 36.29 40.31 26.65 9.00 6.36 8.48 6.64 0.80 27.91 13.20 14.33 63 E15_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 E15a_E15b KnownJunction 0 7.26 0.00 4.85 3.36 0.00 0.00 0.00 2.30 0.00 1.53 19.95 0.00 32.47 39.32 23.98 12.30 12.81 7.01 8.47 2.43 34.04 17.27 12.21 65 ER15b ExonRegion 0 0.05 0.00 0.04 0.05 0.00 0.04 0.02 0.02 0.00 0.93 2.68 0.00 1.19 0.96 1.92 0.11 0.08 0.07 0.08 2.51 1.12 0.15 0.11 66 E15_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.13 0.00 0.00 6.17 2.47 4.45 0.00 0.00 0.00 0.00 2.36 3.09 0.00 0.00 67 ER15c ExonRegion 0 3.45 0.00 3.60 3.67 0.81 5.57 0.80 1.23 0.56 1.65 30.91 1.52 39.89 41.70 36.84 7.55 5.70 6.34 8.99 3.74 29.49 17.15 20.28 68 E15b_E16a KnownJunction 0 7.26 0.00 1.69 2.83 0.00 0.00 0.00 3.37 0.00 2.87 21.69 6.00 28.08 43.26 22.25 4.36 7.76 4.15 0.00 8.88 15.94 24.49 24.50 69 ER16a ExonRegion 0 8.11 1.07 5.65 4.32 6.24 2.12 0.43 3.66 1.06 0.61 30.33 1.34 28.08 41.07 46.32 9.69 1.53 7.28 14.79 1.49 44.70 14.93 29.51 70 E16_Da KnownBoundary 0 0.00 2.70 11.03 3.46 3.31 0.00 2.25 4.31 4.77 0.00 36.06 0.00 76.29 52.74 76.89 24.27 0.00 15.46 4.80 0.00 48.74 25.11 23.90 71 ER16b ExonRegion 0 2.96 3.62 5.16 5.92 1.22 7.31 2.34 2.65 3.10 0.97 26.39 1.68 40.70 42.50 49.61 15.39 6.31 7.41 6.19 1.63 27.23 22.48 20.88 72 E16b_E17a KnownJunction 0 6.96 0.00 5.06 7.56 4.16 9.43 2.25 3.86 2.72 0.00 17.06 0.00 19.48 35.67 41.16 11.45 4.77 6.84 7.44 3.26 33.17 22.53 23.39 73 ER17a ExonRegion 0 6.77 0.27 3.64 6.77 0.94 2.82 0.61 2.46 3.14 0.51 25.70 1.86 19.96 39.81 45.06 9.74 6.42 7.35 7.07 2.84 33.98 20.32 25.77 74 E17a_E18a KnownJunction 0 6.82 3.35 6.18 12.25 0.00 0.00 2.25 1.56 4.25 3.25 33.32 0.00 6.82 44.62 62.67 12.13 8.60 9.91 7.72 3.26 47.57 24.00 35.25 75 ER18a ExonRegion 0 8.74 1.34 5.86 5.37 0.99 4.02 1.81 4.05 2.50 1.38 28.70 1.15 21.05 37.47 52.05 8.69 7.77 8.09 2.29 2.87 38.12 18.91 19.99 76 E18a_E19a KnownJunction 1 6.37 3.03 3.78 1.73 3.65 2.67 0.00 4.23 1.79 1.16 23.58 6.00 54.54 41.44 97.41 8.37 3.65 1.78 0.00 0.00 38.55 20.94 7.43 77 ER19a ExonRegion 0 5.24 0.95 5.02 3.07 1.05 0.96 0.94 2.44 2.01 3.76 22.00 1.45 15.19 29.97 37.09 9.31 5.33 2.22 2.33 5.72 22.26 14.68 11.70 78 E19_Da KnownBoundary 0 5.63 0.00 3.52 3.40 0.00 0.00 0.00 0.00 1.65 10.42 11.58 0.00 0.00 9.71 23.12 0.00 3.93 0.00 0.00 5.24 0.00 8.02 19.55 79 ER19b ExonRegion 0 2.72 0.00 5.31 2.76 0.00 0.00 0.00 0.00 2.68 5.01 6.28 2.08 0.00 10.21 13.72 7.05 1.63 1.16 1.69 2.78 2.78 5.04 8.27