Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CRLS1	Gene	0	64.56	103.21	72.35	104.59	67.37	72.81	50.68	47.38	32.10	56.00	80.38	82.66	53.88	63.86	83.55	49.43	52.45	26.64	34.01	49.48	25.23	72.14	35.35
2	378863	Transcript	1	5.80	7.25	3.60	0.50	1.51	22.16	7.13	1.63	1.15	4.73	38.66	0.78	5.73	24.55	32.49	29.38	29.63	11.21	14.28	15.79	25.97	28.95	13.53
3	452938	Transcript	0	0.00	15.39	4.20	11.75	0.00	21.92	4.02	7.06	4.08	6.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.44	0.00	5.69	0.00	2.88	0.00
4	378868	Transcript	0	0.34	0.01	0.03	1.35	0.00	0.00	0.65	0.85	0.01	1.38	0.62	0.00	0.00	0.49	0.02	0.01	0.01	1.20	0.51	0.73	0.00	0.01	1.88
5	489345	Transcript	0	1.17	1.90	1.07	1.54	5.12	0.82	2.38	2.37	1.08	2.68	8.96	13.03	8.02	5.18	5.03	2.29	3.70	1.38	5.60	2.63	4.23	3.03	2.67
6	464921	Transcript	1	19.64	13.21	7.37	22.87	24.16	7.92	27.55	11.50	9.36	13.22	5.67	20.41	29.03	4.08	10.53	10.20	4.02	3.17	4.86	9.69	2.97	21.03	5.26
7	478846	Transcript	0	113.40	29.46	13.10	38.53	58.21	27.81	23.70	25.07	27.22	25.92	28.66	17.25	23.22	10.89	35.50	16.17	18.92	4.93	7.04	11.43	2.74	24.16	16.71
8	ER1a	ExonRegion	1	6.84	10.93	5.97	1.01	3.03	44.31	14.26	3.26	2.31	9.18	77.32	1.56	11.46	49.10	64.26	58.76	59.25	22.42	28.56	30.52	51.95	57.89	26.33
9	E1_Ab	KnownBoundary	1	10.15	30.32	31.13	3.73	7.72	106.70	28.75	23.86	26.68	48.89	178.89	16.66	12.01	128.14	65.89	126.55	177.47	145.42	104.57	60.66	83.03	133.43	90.23
10	ER1b	ExonRegion	1	8.28	18.83	13.69	6.28	5.42	30.02	14.35	8.68	8.80	21.32	75.70	4.63	8.18	93.57	65.61	54.82	62.60	44.00	30.66	26.88	52.51	47.15	42.25
11	E1_Da	NovelBoundary	0	3.56	2.96	3.13	1.90	3.74	2.67	0.00	1.81	1.68	4.51	2.26	0.00	0.00	17.01	4.45	3.67	0.00	2.20	0.00	0.00	9.02	0.00	0.00
12	E1a_E3a	KnownJunction	1	3.56	83.93	50.86	51.08	18.93	69.45	51.23	38.69	29.11	58.32	150.51	25.36	19.15	204.25	179.62	113.30	79.94	77.81	58.17	60.15	87.97	85.18	73.92
13	ER2a	ExonRegion	0	0.68	0.01	0.06	2.69	0.00	0.00	1.31	1.70	0.02	2.77	1.24	0.00	0.00	0.98	0.04	0.02	0.02	2.41	1.02	1.46	0.00	0.01	3.77
14	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER3a	ExonRegion	1	16.09	84.60	56.37	59.97	19.80	65.65	54.81	30.08	30.88	54.36	179.76	16.45	14.07	202.69	175.24	118.89	81.20	63.19	56.70	64.68	88.59	111.68	74.59
16	ER3b	ExonRegion	1	81.57	130.76	109.17	118.07	89.20	141.34	93.51	69.62	59.19	102.67	279.63	92.32	61.68	274.13	192.12	193.28	194.90	87.15	101.74	97.68	99.80	199.85	105.67
17	E3_Da	NovelBoundary	0	0.00	0.00	2.90	4.26	3.31	0.00	8.13	0.00	11.28	4.16	5.21	0.00	6.82	2.41	10.38	4.10	23.00	4.23	0.00	8.63	0.00	0.00	17.58
18	E3a_E4a	KnownJunction	0	165.21	172.07	208.30	205.53	77.42	232.71	130.99	92.99	88.22	136.19	333.87	191.46	120.28	255.70	312.38	340.77	208.88	104.26	144.00	147.58	122.81	284.74	185.41
19	E4_Aa	NovelBoundary	0	3.11	6.71	5.06	2.06	10.61	0.00	13.43	14.05	6.74	4.81	0.00	0.00	5.68	5.47	0.00	4.36	0.00	0.00	13.37	12.14	0.00	2.45	0.00
20	ER4a	ExonRegion	0	157.86	195.90	208.85	235.09	103.55	163.11	104.94	97.13	86.33	134.32	391.56	208.95	170.36	279.06	294.72	216.58	254.22	85.51	133.39	144.42	83.77	279.21	149.27
21	E4_Da	NovelBoundary	1	14.52	8.75	15.43	11.82	28.10	11.13	26.72	5.26	8.83	9.37	2.58	11.70	26.78	5.36	4.82	28.71	12.25	1.95	4.61	25.82	0.00	2.88	7.85
22	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	3.31	0.00	3.75	0.00	0.00	1.05	11.42	12.15	6.17	7.24	0.00	0.00	7.85	0.00	9.60	0.00	3.15	2.88	0.00
23	E4a_E7b	NovelJunction	0	3.26	0.00	5.97	0.00	11.54	0.00	1.72	0.00	0.00	0.00	0.00	0.00	7.63	0.00	0.00	3.59	0.00	2.57	4.33	0.00	0.00	8.88	0.00
24	E4a_E8b	KnownJunction	0	274.57	269.43	213.65	235.83	142.44	154.91	154.66	87.86	70.11	108.47	364.72	256.43	209.73	291.66	299.77	246.69	264.98	83.40	151.06	167.91	96.25	241.63	123.86
25	E4a_E9a	KnownJunction	0	0.00	15.39	4.20	11.75	0.00	21.92	4.02	7.06	4.08	6.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.44	0.00	5.69	0.00	2.88	0.00
26	I4	Intron	0	12.48	14.41	7.59	14.65	8.29	4.98	19.04	12.02	11.71	12.26	3.94	17.43	25.24	1.82	10.52	14.63	8.82	3.05	7.97	11.91	3.18	8.04	10.84
27	I4_AR1	ActiveIntronRegion	0	12.88	19.63	10.30	17.64	7.75	4.63	18.87	13.77	12.84	15.35	4.30	21.23	31.62	2.19	9.84	11.91	7.59	1.92	7.09	11.84	2.78	10.83	9.81
28	I4_AR2	ActiveIntronRegion	0	23.24	9.10	4.34	17.73	10.97	8.29	32.59	14.77	14.26	11.34	6.09	17.18	14.81	2.19	14.74	32.11	17.28	6.21	14.27	15.20	4.60	8.43	18.72
29	I4_SR1	SilentIntronRegion	0	6.97	6.74	3.82	7.55	8.16	4.20	13.42	7.47	8.43	6.72	2.28	10.25	17.61	0.93	9.98	12.15	7.46	3.83	6.88	10.63	3.31	2.53	9.35
30	E5_Aa	NovelBoundary	1	12.89	23.22	10.08	25.67	68.17	65.87	87.49	20.99	24.59	26.70	19.48	48.92	55.68	14.66	36.84	38.54	12.72	19.32	20.89	20.39	17.73	32.88	29.62
31	ER5a	ExonRegion	0	1.72	2.13	1.28	2.12	4.29	0.04	4.22	2.89	0.14	2.03	12.09	23.76	10.58	7.89	9.18	2.56	3.38	1.85	7.04	2.13	5.07	3.20	0.34
32	E5_Da	NovelBoundary	1	51.49	59.40	12.77	18.05	28.69	5.34	31.49	26.25	33.16	27.64	28.11	59.87	63.47	10.89	24.11	35.38	33.19	26.94	33.79	14.96	8.15	22.96	49.77
33	E5a_E6a	KnownJunction	0	3.48	2.57	1.77	3.90	4.33	0.00	0.00	6.94	2.69	4.00	12.00	6.30	6.82	9.48	10.63	3.85	0.00	2.57	8.85	0.00	8.77	5.82	4.35
34	I5	Intron	0	6.23	11.30	5.37	16.59	8.75	3.60	12.55	23.58	21.06	23.47	22.75	29.72	39.56	20.82	25.00	38.87	30.19	16.82	37.49	19.48	22.33	24.52	25.92
35	I5_SR1	SilentIntronRegion	0	6.27	11.36	5.41	16.70	8.80	3.62	12.63	23.73	21.20	23.62	22.88	29.92	39.82	20.95	25.16	39.10	30.39	16.93	37.71	19.57	22.48	24.68	26.09
36	E6_Aa	NovelBoundary	0	260.12	204.17	679.57	903.48	149.49	181.03	297.57	656.69	653.75	617.10	85.81	42.61	20.13	13.77	32.26	136.37	164.00	266.34	75.86	179.16	65.98	84.01	108.16
37	ER6a	ExonRegion	0	0.62	4.81	0.85	1.70	9.68	4.05	3.91	2.03	0.91	6.34	6.82	17.25	16.55	1.31	5.33	5.07	7.28	2.47	2.53	11.01	4.15	3.28	8.64
38	E6_Da	NovelBoundary	1	10.15	15.06	12.57	29.90	30.05	10.90	24.38	11.58	34.72	25.09	4.63	11.10	45.94	17.31	4.45	0.00	0.00	16.95	9.32	10.99	11.06	17.27	8.02
39	E6a_E7b	KnownJunction	0	0.00	0.00	1.45	0.00	3.99	0.00	0.00	0.00	1.65	0.00	2.47	5.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E6a_E8b	NovelJunction	0	6.45	0.00	0.00	2.06	12.14	0.00	1.68	4.31	4.02	1.99	12.06	12.30	0.00	2.12	4.45	0.00	4.77	0.00	0.00	0.00	5.75	0.00	0.00
41	I6	Intron	0	9.81	10.37	7.62	19.02	14.14	6.46	13.26	10.51	10.75	12.84	6.09	13.41	13.61	6.66	10.62	14.61	13.77	8.78	7.97	17.36	7.77	13.52	14.43
42	I6_SR1	SilentIntronRegion	0	8.72	13.10	9.88	21.44	15.16	7.09	11.94	9.95	13.75	13.65	8.46	8.53	11.16	10.38	12.66	16.84	24.66	14.90	10.67	24.11	17.60	10.20	25.72
43	I6_AR3	ActiveIntronRegion	0	10.46	8.86	6.37	17.71	13.60	6.13	14.04	10.85	9.09	12.41	4.77	16.21	15.03	4.58	9.50	13.38	7.67	5.35	6.48	13.60	2.24	15.43	8.11
44	E7_Aa	NovelBoundary	0	3.78	13.16	15.17	17.05	6.62	2.44	25.26	14.42	16.64	16.76	2.37	0.00	18.99	2.47	8.90	8.12	0.00	0.00	8.38	15.21	0.00	13.84	0.00
45	ER7a	ExonRegion	1	19.64	13.21	7.37	22.87	24.16	7.92	27.55	11.50	9.36	13.22	5.67	20.41	29.03	4.08	10.53	10.20	4.02	3.17	4.86	9.69	2.97	21.03	5.26
46	E7_Ab	KnownBoundary	1	25.56	42.82	13.25	54.41	73.34	37.42	105.46	20.99	20.63	22.05	9.27	36.91	28.08	7.06	26.58	39.65	12.44	13.93	17.51	24.35	16.99	45.62	7.77
47	ER7b	ExonRegion	1	13.02	23.33	8.14	24.45	35.09	20.90	52.48	8.28	11.89	8.70	8.39	22.46	31.95	7.32	21.95	25.52	11.02	9.52	14.48	12.81	11.31	21.27	5.43
48	E7_Da	NovelBoundary	0	23.26	12.56	10.44	34.06	22.24	7.61	32.11	12.45	13.89	18.43	15.48	19.21	35.55	0.00	18.91	15.04	13.00	1.82	0.00	14.64	2.53	20.08	15.96
49	E7a_E8b	KnownJunction	0	3.78	0.00	1.69	6.03	4.24	0.00	6.32	2.55	2.86	0.00	10.58	12.60	12.82	0.00	4.45	8.63	0.00	3.19	4.05	0.00	0.00	12.98	0.00
50	I7	Intron	0	23.21	17.11	8.40	23.30	27.32	18.67	19.20	12.42	13.17	12.28	10.17	14.75	18.44	6.95	16.18	18.92	12.59	7.19	10.94	12.80	5.07	16.48	17.86
51	I7_AR1	ActiveIntronRegion	0	8.76	11.33	5.63	19.02	24.12	11.21	17.46	7.95	10.52	8.42	11.18	16.74	13.08	8.21	11.17	28.61	16.81	9.04	7.56	12.40	2.82	15.27	22.36
52	I7_SR1	SilentIntronRegion	0	11.24	8.85	5.12	10.78	16.89	9.11	20.59	4.89	6.59	5.58	6.35	5.68	12.40	4.77	14.34	13.13	11.41	1.34	16.70	11.33	1.72	12.16	16.30
53	I7_AR2	ActiveIntronRegion	0	5.57	11.14	7.44	20.67	18.13	11.60	14.15	9.72	11.89	9.08	4.61	8.09	15.02	4.93	8.48	11.50	6.00	4.07	8.35	9.26	1.94	15.56	13.06
54	I7_SR2	SilentIntronRegion	1	53.63	29.36	12.45	32.73	40.92	33.62	24.57	20.59	18.36	20.15	15.29	21.58	27.52	8.31	27.42	19.23	15.23	10.09	14.24	16.64	10.56	19.53	18.86
55	E8_Aa	NovelBoundary	1	141.88	27.10	31.99	77.15	50.85	18.91	24.82	38.98	18.32	44.56	16.37	25.21	26.78	7.83	52.91	45.54	21.13	7.88	8.38	16.55	0.00	58.66	31.07
56	ER8a	ExonRegion	1	113.40	29.46	13.10	38.53	58.21	27.81	23.70	25.07	27.22	25.92	28.66	17.25	23.22	10.89	35.50	16.17	18.92	4.93	7.04	11.43	2.74	24.16	16.71
57	E8_Ab	KnownBoundary	0	162.62	68.80	27.38	59.07	70.12	24.08	44.56	37.17	29.31	45.45	20.22	29.41	18.83	9.59	36.71	11.79	21.88	4.52	13.55	9.78	2.47	25.41	18.87
58	ER8b	ExonRegion	0	284.01	333.72	283.25	353.63	208.14	244.78	195.81	157.35	115.01	163.79	442.72	340.75	210.89	338.12	446.25	332.67	301.59	127.26	164.74	179.10	124.06	398.05	194.68
59	E8_Da	NovelBoundary	0	0.00	17.69	1.24	20.41	10.44	8.01	15.59	16.80	6.39	5.48	7.26	0.00	6.17	3.00	0.00	4.36	4.30	0.00	0.00	16.68	3.15	5.02	4.35
60	E8a_E9a	KnownJunction	0	184.11	341.65	231.54	279.92	260.70	282.96	203.59	123.10	113.97	151.10	398.94	378.42	207.78	275.00	436.74	191.40	227.96	111.14	114.54	186.06	149.62	261.16	154.42
61	I8	Intron	0	9.94	16.99	6.68	22.62	16.60	14.01	13.06	8.81	9.37	9.25	2.46	8.37	7.35	2.47	4.25	3.31	2.37	1.25	1.01	5.25	0.88	8.95	7.01
62	I8_AR1	ActiveIntronRegion	0	7.53	15.50	8.00	25.01	18.25	14.29	11.83	8.66	9.32	10.25	3.47	8.69	8.49	3.07	5.40	4.01	3.44	1.64	1.65	7.05	1.43	10.31	8.67
63	I8_SR1	SilentIntronRegion	0	14.35	20.42	4.79	19.70	14.73	14.31	15.69	9.44	9.98	7.84	0.85	7.85	5.85	1.49	2.57	2.21	0.72	0.66	0.00	2.52	0.00	7.18	4.42
64	E9_Aa	NovelBoundary	1	9.19	35.19	9.11	35.19	33.45	18.23	15.81	10.23	11.31	15.02	2.16	12.60	32.14	4.59	8.90	7.69	4.77	3.36	8.85	14.76	0.00	24.43	3.67
65	ER9a	ExonRegion	0	172.27	351.78	228.63	327.55	306.16	302.34	214.87	125.85	99.49	148.83	440.48	333.87	234.30	271.09	410.21	241.65	282.25	131.73	134.94	161.89	165.63	274.90	133.81
66	E9a_E10a	KnownJunction	0	280.12	398.94	271.40	398.85	250.17	259.51	187.25	133.00	98.61	148.22	364.09	409.18	377.25	337.16	480.75	291.12	299.30	145.09	149.93	158.07	210.78	328.33	154.00
67	ER10a	ExonRegion	0	210.03	300.66	264.05	397.69	191.49	220.12	149.52	147.96	115.57	156.42	375.56	468.45	375.36	343.66	544.47	285.82	288.77	127.68	133.10	148.40	191.91	348.57	153.73
68	E10_Da	KnownBoundary	0	248.56	315.93	285.26	438.87	215.70	214.37	209.42	176.99	127.20	191.36	374.25	368.52	145.77	395.67	591.39	299.49	322.86	103.14	108.90	188.36	152.10	349.03	154.08
69	ER10b	ExonRegion	0	195.78	265.38	277.09	375.65	195.41	168.37	167.89	164.10	124.55	186.66	494.70	355.96	210.90	341.57	479.34	281.98	346.59	106.19	122.94	206.91	154.54	350.36	157.84
70	E10_Db	NovelBoundary	0	0.00	0.00	0.00	4.00	11.46	2.78	15.10	2.38	3.07	4.54	10.32	0.00	7.79	0.00	4.45	0.00	9.54	2.24	0.00	18.79	0.00	9.37	12.46
71	E10b_E11a	KnownJunction	0	237.89	295.41	298.33	405.11	219.61	180.98	199.53	160.85	123.18	209.34	548.77	358.62	280.34	356.23	500.40	249.85	393.17	98.41	159.63	228.06	168.90	359.38	168.93
72	ER11a	ExonRegion	0	274.91	402.96	231.35	327.16	248.40	228.09	178.04	132.28	99.05	168.93	268.62	359.58	243.84	198.60	331.83	152.10	165.36	64.07	90.88	131.85	66.27	248.84	99.49
73	E11_Da	KnownBoundary	1	115.35	259.36	154.28	228.91	236.25	245.77	207.79	142.90	58.01	154.81	78.81	297.10	125.97	104.19	120.28	33.92	36.56	15.30	71.06	90.83	5.87	145.98	63.25
74	ER11b	ExonRegion	1	41.36	85.22	58.90	92.16	52.97	57.94	34.10	43.27	24.24	47.16	23.65	51.22	24.75	17.44	28.64	11.31	12.26	11.88	18.76	38.41	3.85	31.50	15.07
75	ER11c	ExonRegion	0	4.76	3.56	1.23	0.00	0.00	0.00	0.00	0.00	0.00	0.29	0.00	0.00	0.00	0.00	0.73	0.00	0.00	0.00	0.00	1.06	0.00	0.00	0.73