Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL158169.1 Gene 0 51.39 45.51 17.09 22.20 55.74 25.13 58.78 19.65 16.27 17.20 32.19 37.67 58.05 34.08 55.53 69.61 53.80 27.44 43.68 56.07 25.25 20.60 49.43 2 419707 Transcript 0 461.31 396.14 1546.85 1557.67 350.79 287.85 513.05 1685.78 1648.65 1467.07 199.17 98.27 141.05 95.48 177.63 494.14 448.61 2058.07 401.31 551.12 314.29 231.57 436.74 3 ER1a ExonRegion 0 96.61 90.04 12.03 10.28 76.08 31.95 104.82 9.03 9.70 2.69 20.68 41.87 40.98 28.14 72.68 81.54 50.82 27.21 55.49 100.81 27.98 39.07 78.98 4 E1_Da NovelBoundary 0 1776.09 1382.25 1208.68 1166.92 1067.83 771.20 1314.68 1273.67 1273.25 1149.53 567.51 251.63 311.51 234.45 431.80 1713.99 1118.56 1819.26 1463.38 1412.83 674.42 697.33 1570.34 5 E1a_E2a KnownJunction 0 167.07 163.06 594.07 581.91 114.26 92.22 123.43 633.49 580.64 539.58 37.48 14.55 13.96 13.48 34.74 102.96 89.01 768.75 137.51 143.43 69.25 73.73 163.30 6 Ix_AR1 ActiveIntronRegion 0 0.00 6.97 3.68 18.69 3.06 7.86 11.16 15.56 19.23 10.49 1.93 9.90 4.69 0.00 9.12 18.26 11.32 12.67 10.01 38.60 4.41 0.00 11.75 7 Ix_AR2 ActiveIntronRegion 0 8.08 15.90 4.90 13.88 14.35 5.00 25.40 8.96 15.16 10.32 0.00 8.66 5.54 1.62 8.44 10.00 3.30 4.70 0.00 21.86 0.00 2.08 11.75 8 E2_Aa NovelBoundary 0 181.29 197.53 215.22 249.15 203.31 163.83 180.80 184.09 244.38 139.76 112.55 39.61 25.32 20.19 66.51 173.89 150.16 346.18 230.78 157.04 54.67 130.61 189.16 9 ER2a ExonRegion 0 62.76 49.14 36.95 54.02 83.29 35.29 75.00 46.93 38.00 45.57 58.82 45.81 97.51 43.85 57.42 117.19 93.38 56.98 56.60 65.19 46.23 23.48 67.06 10 E2_Da NovelBoundary 0 50.60 51.57 251.62 247.85 55.35 61.10 89.96 230.01 289.58 166.03 30.90 24.76 57.95 22.60 32.02 99.03 119.96 237.49 112.85 102.59 36.63 41.88 85.79 11 E2a_E3a KnownJunction 0 2810.57 2389.57 9066.09 9130.64 2062.06 1786.36 3169.65 10058.75 9907.80 8668.86 1223.99 517.97 725.93 498.68 975.46 3064.41 2777.46 12259.30 2454.28 3396.18 2003.44 1449.70 2661.54 12 Ix Intron 0 32.84 16.93 12.05 29.97 29.14 29.69 25.44 24.47 28.17 16.96 5.04 18.64 19.08 13.21 16.06 16.25 15.41 10.74 11.65 17.53 4.35 7.88 6.54 13 Ix_SR1 SilentIntronRegion 0 27.19 15.11 8.37 21.80 20.20 20.50 19.26 20.64 23.88 12.31 3.67 14.09 13.70 11.50 13.38 15.41 16.45 9.08 9.94 16.11 3.37 6.45 5.90 14 Ix_AR1 ActiveIntronRegion 0 49.33 22.29 22.73 53.69 55.06 56.34 43.40 35.68 40.69 30.47 9.03 31.86 34.69 18.24 23.87 18.75 12.48 15.59 16.65 21.74 7.20 12.07 8.45 15 Ix Intron 0 75.52 34.57 21.42 29.66 47.41 46.54 26.95 24.04 31.73 22.92 6.48 25.12 17.04 22.58 27.05 32.02 20.55 12.99 22.88 19.87 10.03 10.98 14.77 16 Ix_AR1 ActiveIntronRegion 0 76.19 34.88 21.62 29.94 47.82 46.98 27.19 24.27 32.03 23.12 6.54 25.36 17.20 22.78 27.31 32.33 20.74 13.11 23.10 20.06 10.12 11.08 14.91 17 Ix_SR2 SilentIntronRegion 0 8.30 11.41 14.54 28.41 17.45 10.32 13.28 15.56 13.08 16.38 1.57 4.98 1.80 2.91 11.76 9.35 6.13 6.81 14.84 15.92 5.39 1.85 3.47 18 Ix_SR3 SilentIntronRegion 0 15.83 11.64 4.92 15.53 9.41 4.58 8.37 22.57 10.69 10.35 0.95 7.54 16.81 1.40 3.49 5.72 5.26 3.66 9.00 3.35 7.10 2.41 3.86 19 Ix_AR2 ActiveIntronRegion 0 2.73 11.78 5.62 16.41 3.46 16.58 3.70 17.07 13.90 16.77 3.06 0.00 4.49 5.89 11.24 11.27 8.11 13.01 0.66 0.80 3.58 0.26 15.78 20 Ix Intron 0 24.53 10.57 9.36 16.35 23.19 11.51 15.49 16.27 12.76 9.68 1.19 7.97 3.89 1.87 4.54 5.38 6.10 3.29 6.13 8.76 2.21 2.65 3.62 21 Ix_SR1 SilentIntronRegion 0 24.62 10.61 9.39 16.41 23.28 11.56 15.54 16.33 12.81 9.70 1.20 8.00 3.91 1.88 4.55 5.40 6.13 3.31 6.16 8.79 2.22 2.66 3.63 22 I2_AR6 ActiveIntronRegion 0 13.65 0.81 8.81 10.65 3.01 2.97 3.43 3.97 7.38 1.26 0.23 0.00 0.00 0.16 0.48 2.04 2.68 0.86 2.12 3.19 0.00 0.00 2.96 23 Ix Intron 0 20.29 1.24 7.08 21.13 12.01 13.09 3.51 2.63 12.39 0.70 0.00 0.00 0.00 1.64 0.84 1.21 0.67 0.00 1.95 3.47 0.45 0.00 1.80 24 Ix_AR1 ActiveIntronRegion 0 21.89 1.45 11.72 29.70 15.27 20.93 5.67 3.66 15.09 1.21 0.00 0.00 0.00 0.95 0.00 2.12 1.18 0.00 2.27 4.55 0.79 0.00 2.09 25 Ix_SR1 SilentIntronRegion 0 18.48 0.99 0.89 9.86 7.80 2.67 0.64 1.25 8.94 0.00 0.00 0.00 0.00 2.60 1.99 0.00 0.00 0.00 1.55 2.07 0.00 0.00 1.43 26 Ix Intron 0 14.67 0.44 5.81 13.99 3.15 13.43 4.04 10.78 20.94 3.87 0.17 0.34 2.09 2.04 0.73 2.98 1.44 3.04 3.47 3.25 0.29 0.36 5.63 27 Ix_SR2 SilentIntronRegion 0 15.38 0.50 6.23 14.26 3.13 14.12 4.20 11.55 22.79 3.58 0.19 0.38 2.34 2.03 0.82 3.33 1.61 3.41 3.26 3.53 0.21 0.41 6.16 28 E3_Aa NovelBoundary 0 2846.43 2475.41 2666.79 2825.81 2647.88 1967.84 3187.36 3054.47 2892.10 2519.03 1112.91 642.66 562.14 438.82 748.75 2402.70 2351.47 3473.05 2096.15 2878.89 1669.16 1648.10 3014.43 29 ER3a ExonRegion 0 31.47 29.85 12.45 14.65 44.67 25.67 37.21 14.08 10.36 12.43 37.06 52.70 74.17 47.58 74.43 55.88 48.41 14.66 48.80 41.50 17.63 14.25 36.81 30 E3_Da NovelBoundary 1 35.78 26.31 129.92 161.92 36.67 33.39 28.04 113.08 130.61 98.96 12.85 7.20 6.82 2.47 5.93 60.84 13.28 206.65 31.44 46.85 11.98 9.00 37.90 31 E3a_E4a KnownJunction 0 60.53 50.06 1106.38 1112.15 73.60 43.44 79.93 1038.19 994.03 1000.37 15.21 15.00 34.74 27.14 23.73 37.00 76.02 1279.62 54.78 108.91 35.52 20.76 49.43 32 E4_Aa NovelBoundary 0 556.17 514.05 1092.60 1199.85 455.52 283.02 518.91 1042.75 977.51 921.55 177.26 92.13 120.61 53.68 187.90 493.29 389.06 1162.39 345.89 535.63 345.71 223.93 477.95 33 ER4a ExonRegion 0 0.19 1.28 0.00 0.02 1.60 0.00 1.30 0.00 0.02 0.00 0.95 0.00 0.08 9.49 4.94 0.00 5.15 0.00 1.73 1.83 0.00 0.00 0.05