Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TSTD1 Gene 0 42.20 0.34 35.25 3.68 35.41 4.10 29.52 33.01 55.62 4.03 29.90 10.67 9.17 42.79 80.07 69.15 49.11 0.46 3.09 0.81 0.37 1.67 1.36 2 368025 Transcript 0 1.21 0.00 0.00 0.00 0.38 0.00 1.70 0.00 1.41 0.00 0.00 0.00 0.00 0.00 5.39 6.37 1.41 0.00 0.00 0.00 0.00 0.00 0.00 3 423014 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 368024 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 368023 Transcript 0 3.26 0.00 0.00 0.00 0.00 0.00 0.00 2.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 318289 Transcript 0 13.61 0.00 33.44 3.88 7.17 0.10 14.25 16.80 38.20 5.78 11.92 5.05 7.30 17.59 13.50 12.22 17.93 0.00 4.73 0.65 0.00 0.03 0.00 7 486084 Transcript 0 28.32 0.43 16.77 2.44 15.69 0.92 10.95 19.81 33.09 4.10 3.41 2.82 1.90 15.60 17.74 25.86 10.89 0.58 1.80 0.44 0.46 0.44 1.84 8 466967 Transcript 0 0.24 0.00 3.44 0.68 2.01 0.00 0.66 2.50 0.82 1.02 0.21 0.00 0.00 2.03 5.88 18.74 6.79 0.00 0.00 0.00 0.00 0.00 0.00 9 462952 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ER1a ExonRegion 0 1.21 0.00 0.00 0.00 0.38 0.00 1.70 0.00 1.41 0.00 0.00 0.00 0.00 0.00 5.39 6.37 1.41 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1b ExonRegion 1 17.84 0.00 0.00 0.00 5.35 1.31 10.59 2.72 5.47 0.00 1.93 0.00 0.00 1.62 19.48 17.41 13.20 0.79 0.00 0.00 0.00 0.00 0.00 12 E1_Ad KnownBoundary 0 70.38 0.00 1.69 0.00 29.46 10.62 39.39 2.09 8.74 2.66 15.85 0.00 0.00 7.36 28.18 45.29 56.57 0.00 0.00 0.00 0.00 0.00 0.00 13 ER1c ExonRegion 0 63.26 0.83 8.08 0.00 36.07 2.65 41.97 12.61 18.21 0.59 26.27 0.00 0.00 28.63 106.38 88.61 77.14 1.85 0.00 0.00 0.00 1.16 0.00 14 E1_Ae KnownBoundary 0 107.28 3.09 3.10 0.00 135.23 2.90 91.59 9.61 11.60 0.00 70.81 0.00 14.12 76.40 111.26 218.58 147.55 2.57 0.00 0.00 0.00 3.12 4.35 15 ER1d ExonRegion 0 132.04 2.03 24.22 0.84 78.63 3.81 88.81 26.59 39.81 1.15 62.60 0.00 0.00 84.08 232.55 200.73 148.29 1.85 0.00 0.00 0.00 4.33 0.00 16 E1_Af KnownBoundary 0 132.54 0.00 45.21 5.39 72.24 7.67 80.69 24.19 74.33 1.05 39.69 0.00 0.00 19.42 47.10 112.36 67.60 0.00 9.60 0.00 0.00 8.45 0.00 17 ER1e ExonRegion 0 169.12 2.03 43.06 2.79 83.46 4.98 122.25 34.49 69.23 1.15 79.25 0.00 0.67 100.08 270.23 231.83 175.58 1.85 0.00 0.00 0.00 7.84 0.00 18 ER1f ExonRegion 0 114.12 0.34 53.81 4.09 59.98 6.52 87.93 42.35 77.19 0.89 40.91 5.65 10.29 44.71 126.29 109.23 78.49 0.62 0.00 0.00 0.00 4.80 0.00 19 E1a_E2b KnownJunction 0 3.26 0.00 0.00 0.00 0.00 0.00 0.00 2.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E1a_E2c KnownJunction 0 54.68 0.00 20.87 3.66 32.09 5.79 15.10 21.03 44.07 0.00 21.06 0.00 14.61 11.83 20.03 36.06 25.81 0.00 0.00 0.00 0.00 0.00 0.00 21 E1a_E2e KnownJunction 0 0.00 0.00 24.51 0.00 39.98 0.00 36.52 11.87 30.61 0.00 2.68 6.00 0.00 7.12 23.61 4.36 4.77 0.00 0.00 0.00 0.00 0.00 0.00 22 Ix Intron 1 2.88 0.00 3.73 0.69 1.82 0.00 1.35 6.13 8.14 2.32 1.97 0.00 0.00 3.12 7.08 2.02 20.20 0.94 4.33 0.72 0.00 0.00 0.00 23 Ix_AR1 ActiveIntronRegion 0 2.92 0.00 3.78 0.70 1.84 0.00 1.37 6.21 8.25 2.36 2.00 0.00 0.00 3.15 7.17 2.05 20.47 0.95 4.39 0.73 0.00 0.00 0.00 24 E2_Aa NovelBoundary 1 3.48 0.00 6.92 0.00 3.48 0.00 0.00 3.61 12.30 0.00 0.00 7.35 0.00 7.00 23.73 40.42 4.30 0.00 9.60 0.00 0.00 0.00 0.00 25 ER2a ExonRegion 0 0.24 0.00 3.44 0.68 2.01 0.00 0.66 2.50 0.82 1.02 0.21 0.00 0.00 2.03 5.88 18.74 6.79 0.00 0.00 0.00 0.00 0.00 0.00 26 E2_Ab KnownBoundary 1 0.00 2.89 5.20 0.00 4.33 0.00 0.00 7.43 10.27 6.53 0.00 0.00 0.00 4.94 16.19 56.91 9.35 0.00 0.00 0.00 0.00 0.00 0.00 27 E2_Ac KnownBoundary 0 3.33 2.96 11.53 2.06 7.39 0.00 7.68 4.56 9.00 4.30 2.68 6.30 0.00 11.54 14.34 3.76 8.98 0.00 0.00 2.88 0.00 0.00 0.00 28 ER2b ExonRegion 0 5.14 1.45 8.87 1.56 9.43 0.26 4.22 6.42 8.76 2.29 3.04 4.12 0.67 9.05 14.92 29.58 13.68 0.00 0.00 1.52 0.00 0.00 0.00 29 ER2c ExonRegion 0 18.04 0.60 30.61 2.93 16.67 4.37 11.29 32.17 43.99 3.32 39.50 2.06 5.84 25.93 70.94 32.35 65.31 0.00 2.85 0.63 0.00 0.27 0.00 30 E2_Da KnownBoundary 0 10.74 0.00 18.27 1.30 0.00 2.90 5.70 8.79 17.65 3.12 2.16 0.00 0.00 7.42 8.90 8.37 9.16 2.32 0.00 0.00 0.00 0.00 0.00 31 E2a_E2e KnownJunction 0 0.00 0.00 49.53 9.36 28.01 11.53 8.66 43.87 75.35 1.67 76.76 0.00 0.00 90.65 152.17 90.32 102.76 0.00 3.58 0.00 0.00 2.88 0.00 32 ER2d ExonRegion 0 28.32 0.43 16.77 2.44 15.69 0.92 10.95 19.81 33.09 4.10 3.41 2.82 1.90 15.60 17.74 25.86 10.89 0.58 1.80 0.44 0.46 0.44 1.84 33 E2_Ad KnownBoundary 0 37.86 0.00 21.91 1.47 35.06 0.00 16.78 36.51 48.49 4.41 5.26 6.30 6.82 16.95 13.35 20.93 17.11 0.00 0.00 0.00 0.00 0.00 0.00 34 ER2e ExonRegion 0 34.91 0.00 18.62 1.27 17.51 2.31 12.35 21.01 35.03 3.24 4.48 4.03 5.82 20.26 22.55 28.98 11.35 0.61 1.65 0.94 0.48 0.47 1.95 35 E2_Ae KnownBoundary 0 21.34 0.00 20.19 4.89 12.05 4.88 20.05 23.70 33.94 4.03 10.16 17.11 0.00 21.84 13.35 20.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER2f ExonRegion 0 32.85 0.00 79.69 9.54 70.61 9.35 34.28 71.62 125.14 6.29 83.28 26.73 21.45 118.43 242.15 206.07 124.56 0.00 3.91 1.34 0.69 3.28 2.76 37 E2_Db KnownBoundary 0 10.59 0.00 18.63 3.90 16.89 0.00 12.54 4.97 23.70 1.50 0.00 0.00 0.00 9.71 15.70 3.42 0.00 0.00 4.42 0.00 0.00 0.00 0.00 38 E2b_E2f KnownJunction 1 3.78 0.00 84.30 12.29 53.06 7.89 33.43 69.50 77.08 0.00 61.54 17.56 6.82 65.10 206.07 235.58 53.67 0.00 7.72 0.00 0.00 2.94 0.00 39 E2_Dc KnownBoundary 0 10.45 0.00 14.16 2.06 0.00 0.00 10.29 9.69 25.72 1.34 2.11 0.00 0.00 10.42 8.90 7.78 3.65 0.00 0.00 0.00 0.00 0.00 0.00 40 ER2g ExonRegion 0 9.03 0.00 19.61 3.27 10.88 0.24 13.77 9.79 32.11 2.60 1.55 0.00 0.00 12.99 15.47 7.73 1.76 0.00 3.19 0.00 0.00 0.00 0.00 41 ER2h ExonRegion 0 13.61 0.00 33.44 3.88 7.17 0.10 14.25 16.80 38.20 5.78 11.92 5.05 7.30 17.59 13.50 12.22 17.93 0.00 4.73 0.65 0.00 0.03 0.00 42 E2_Af KnownBoundary 0 23.19 0.00 36.55 3.30 19.61 0.00 20.89 20.82 43.89 2.36 5.00 0.00 12.99 25.13 10.63 15.64 15.90 0.00 0.00 3.26 0.00 0.00 0.00 43 ER2i ExonRegion 0 78.34 0.77 68.73 5.33 79.55 11.54 86.61 63.19 107.30 8.04 63.90 35.15 22.33 79.41 114.53 101.47 82.69 0.21 8.58 1.64 0.84 5.27 0.94 44 E2_Dd KnownBoundary 0 151.66 0.00 81.75 10.49 52.89 7.84 87.88 77.55 99.77 0.00 43.54 43.51 25.81 94.77 133.01 77.84 44.13 1.91 16.66 3.26 0.00 0.00 7.51 45 ER2j ExonRegion 0 96.05 0.00 34.54 5.85 67.03 1.99 37.73 29.26 40.31 0.00 31.06 23.14 19.73 51.02 104.30 59.29 41.77 1.85 6.92 1.03 0.00 1.80 2.99 46 ER2k ExonRegion 0 2.12 0.00 0.00 1.82 13.38 0.00 2.21 0.00 3.29 0.00 2.58 0.00 9.38 3.25 10.64 3.96 3.30 1.85 0.00 0.00 0.00 0.69 0.00