Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SFT2D2 Gene 0 42.98 25.15 19.24 29.07 49.44 42.00 65.40 44.44 49.89 50.50 149.27 128.02 131.02 112.03 87.69 285.12 142.01 127.93 42.93 121.43 153.66 100.37 123.31 2 471981 Transcript 0 0.73 0.47 0.42 0.23 0.60 2.24 2.14 0.00 0.42 1.06 0.93 1.25 4.75 0.77 0.71 1.37 3.03 0.57 0.00 2.35 1.34 0.72 0.67 3 367829 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 271375 Transcript 0 25.86 27.14 20.67 32.61 47.09 37.72 76.78 54.18 62.60 65.21 139.79 156.75 155.37 126.62 69.59 321.49 147.66 131.52 48.51 127.18 160.02 102.30 134.24 5 367825 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.56 0.00 0.00 0.00 0.35 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.57 0.00 1.64 0.00 0.00 0.00 7 ER1b ExonRegion 0 3.28 3.65 0.23 0.00 0.60 7.21 2.26 0.00 0.53 1.38 3.10 0.00 0.00 1.65 0.00 2.77 1.31 6.50 2.75 9.83 3.31 0.47 2.53 8 E1_Ac KnownBoundary 0 7.41 3.35 0.00 0.00 0.00 10.11 0.00 0.00 0.00 1.24 2.68 0.00 0.00 0.00 0.00 4.36 0.00 3.86 4.80 6.26 5.62 0.00 4.35 9 E1_Ad KnownBoundary 0 6.67 13.42 1.48 0.00 16.04 5.79 21.46 0.00 5.27 3.04 9.16 0.00 0.00 17.84 0.00 15.12 12.34 16.37 4.80 19.75 14.76 7.96 11.78 10 ER1c ExonRegion 0 20.46 17.85 4.08 1.67 15.76 26.28 29.13 1.73 4.53 2.55 28.78 0.00 0.00 16.96 10.32 36.99 32.64 30.39 10.97 36.64 32.81 10.42 34.91 11 ER1d ExonRegion 1 94.06 30.34 11.94 12.28 77.38 82.71 85.89 19.07 26.57 23.53 111.49 19.78 18.87 51.60 64.25 280.90 101.80 130.38 37.10 90.21 147.21 61.16 151.46 12 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E3a KnownJunction 0 3.78 0.00 4.44 1.53 8.66 2.84 14.62 15.03 15.16 12.57 42.85 25.06 13.64 18.95 45.61 68.02 70.87 43.19 3.58 41.80 80.68 13.96 32.10 14 ER2a ExonRegion 0 2.92 1.87 1.68 0.93 2.41 8.41 6.31 0.00 1.69 3.91 3.55 4.99 19.01 3.07 2.82 5.46 12.10 1.70 0.00 7.74 2.44 2.87 2.70 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 16 ER3a ExonRegion 1 9.54 8.84 14.99 16.62 12.27 5.00 17.90 23.80 31.39 34.24 190.65 46.38 41.89 72.30 74.33 159.13 200.44 99.23 29.07 130.99 224.50 68.09 105.28 17 E3a_E4a KnownJunction 0 23.56 3.03 22.44 34.89 16.81 10.28 32.77 35.90 54.20 53.62 159.36 104.13 41.56 130.85 188.27 436.04 155.03 186.66 80.19 164.33 164.64 130.30 317.81 18 ER4a ExonRegion 0 12.08 16.13 15.76 20.79 63.10 54.16 45.60 41.32 47.11 51.56 102.20 69.52 91.67 95.46 126.61 406.87 110.77 198.27 54.23 123.43 151.54 104.95 214.41 19 E4_Da NovelBoundary 0 14.37 3.29 3.02 7.39 7.81 22.20 22.13 11.34 3.33 0.00 5.11 5.85 0.00 12.54 8.90 29.39 39.64 4.48 0.00 5.11 13.84 8.39 13.91 20 E4a_E5a KnownJunction 0 27.56 37.69 19.75 22.04 166.04 112.38 124.63 43.50 41.55 42.50 104.92 104.58 174.50 102.77 103.84 246.52 141.84 118.23 32.00 120.68 172.24 96.93 126.59 21 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.10 0.00 2.24 0.00 0.00 0.00 0.00 0.00 22 I4 Intron 0 10.10 3.64 1.63 4.96 7.91 6.17 10.59 4.61 6.19 3.43 23.64 29.26 27.07 17.15 12.69 45.37 22.11 9.64 4.40 11.65 21.92 10.11 12.02 23 I4_AR1 ActiveIntronRegion 0 13.21 4.57 1.60 5.98 7.17 7.79 11.91 5.09 9.25 4.98 27.89 35.40 25.88 20.60 12.24 65.69 23.37 15.72 3.76 16.05 31.64 13.50 17.30 24 I4_SR1 SilentIntronRegion 0 8.77 3.24 1.65 4.52 8.25 5.47 10.04 4.41 4.87 2.76 21.84 26.66 27.65 15.69 12.92 36.62 21.60 7.02 4.70 9.76 17.73 8.66 9.75 25 E5_Aa NovelBoundary 0 27.04 18.22 2.60 12.52 12.05 17.77 17.80 4.44 18.08 2.55 36.75 25.21 20.45 16.60 51.55 41.19 28.42 6.88 0.00 6.39 45.72 8.88 19.63 26 ER5a ExonRegion 0 48.63 36.06 14.39 31.78 98.64 97.19 131.65 40.89 46.86 51.44 157.79 154.33 179.71 133.49 135.51 263.79 147.41 133.15 31.50 133.42 201.75 121.91 119.51 27 E5a_E6a KnownJunction 0 35.12 53.21 15.17 31.83 51.44 29.02 63.33 46.58 45.98 48.27 160.78 194.31 144.15 148.57 116.69 203.71 177.84 122.91 34.26 127.51 208.56 99.99 93.64 28 I5_AR2 ActiveIntronRegion 0 10.58 1.16 4.90 8.18 2.68 1.31 1.70 4.20 2.47 1.15 4.69 0.00 18.76 0.00 0.00 0.42 9.90 8.18 0.00 12.46 4.41 4.17 2.94 29 ER6a ExonRegion 0 52.80 43.04 14.74 33.05 43.41 21.70 46.78 47.48 44.46 53.17 165.42 138.78 133.93 117.66 109.84 205.24 180.17 142.38 41.06 111.17 228.51 99.49 90.22 30 E6_Da NovelBoundary 0 20.45 6.31 0.00 4.03 3.65 0.00 15.19 8.38 1.79 3.09 7.37 19.06 0.00 2.47 4.45 20.42 3.55 1.62 0.00 6.26 2.84 2.63 0.00 31 E6a_E7a KnownJunction 0 89.05 37.76 12.80 29.20 31.49 14.14 48.53 34.34 31.39 48.46 156.83 134.29 149.67 130.08 154.15 215.76 155.49 106.83 58.83 127.77 245.38 109.00 91.51 32 ER7a ExonRegion 0 58.40 29.40 25.92 31.07 39.05 20.36 52.13 51.59 50.68 56.86 198.70 165.62 197.94 164.04 144.03 332.32 180.09 141.56 60.09 166.03 249.28 147.51 96.76 33 E7_Da NovelBoundary 0 12.15 0.00 4.20 11.52 12.48 2.90 24.78 16.88 2.84 7.44 8.05 0.00 21.43 2.41 17.80 23.67 18.23 13.76 0.00 23.84 8.28 8.33 16.90 34 E7a_E8a KnownJunction 1 67.05 28.68 34.71 20.88 27.76 23.45 49.55 50.69 43.63 42.68 175.89 221.62 90.09 148.80 129.43 290.95 108.84 99.74 61.37 173.79 190.21 134.77 108.75 35 I7 Intron 0 13.35 5.47 2.79 5.73 12.43 7.84 15.44 6.32 5.39 3.11 10.61 20.47 20.53 8.61 8.10 19.06 10.97 5.60 3.78 10.72 9.94 8.58 7.59 36 I7_AR1 ActiveIntronRegion 0 7.25 2.95 3.37 5.79 10.66 6.52 15.84 7.52 5.88 2.46 7.14 21.84 28.50 5.91 3.17 15.00 8.85 2.49 1.03 14.69 6.86 6.00 6.77 37 I7_SR1 SilentIntronRegion 0 13.79 7.29 2.64 5.64 14.70 9.00 18.15 8.06 5.28 3.01 9.40 22.30 20.98 9.93 9.37 15.82 11.59 5.24 4.48 11.66 8.77 9.89 7.57 38 I7_AR2 ActiveIntronRegion 0 17.69 4.86 1.63 5.49 9.94 6.70 11.23 4.87 5.06 1.57 11.38 22.79 24.60 7.26 8.13 17.39 8.72 4.97 2.42 7.30 8.89 6.37 3.01 39 I7_SR2 SilentIntronRegion 0 13.55 4.09 3.67 6.12 11.09 7.37 12.97 2.91 5.55 5.15 15.30 13.63 10.02 9.09 9.24 30.61 13.25 9.35 5.60 8.55 15.77 9.68 12.17 40 E8a_E9a KnownJunction 0 94.09 28.88 23.77 71.09 54.16 34.01 96.72 43.83 70.89 80.26 210.58 204.97 195.60 184.12 197.05 315.13 190.56 144.88 59.86 169.83 135.48 201.09 173.20 41 ER8a ExonRegion 0 78.66 28.94 32.10 54.52 42.81 27.08 64.83 56.29 73.20 77.91 221.32 205.79 139.29 172.75 153.48 331.39 145.79 161.55 65.09 173.47 196.35 171.33 154.37 42 ER9a ExonRegion 0 68.43 34.58 31.80 49.29 64.46 49.71 86.60 73.90 78.62 73.84 233.08 225.75 224.69 175.49 123.05 411.89 205.68 173.57 61.85 172.51 176.61 154.37 157.61 43 E9_Da KnownBoundary 0 66.68 61.77 34.33 49.78 69.86 45.31 104.67 61.20 89.87 50.29 156.83 216.07 170.44 161.81 68.98 350.08 127.44 192.92 56.94 176.22 186.44 148.67 132.65 44 ER9b ExonRegion 0 25.86 27.14 20.67 32.61 47.09 37.72 76.78 54.18 62.60 65.21 139.79 156.75 155.37 126.62 69.59 321.49 147.66 131.52 48.51 127.18 160.02 102.30 134.24 45 IG24 Intergenic 0 22.13 24.86 17.62 22.14 35.08 33.56 54.85 32.12 32.72 35.26 76.50 49.02 70.72 83.81 48.94 214.58 102.37 93.29 30.88 85.16 97.29 64.20 93.55 46 IG24_AR1 ActiveIntergenicRegion 0 38.30 33.37 9.23 17.74 32.15 22.07 55.26 28.20 25.84 35.06 68.75 70.25 90.70 80.70 38.68 233.64 79.02 53.98 22.70 65.69 56.62 75.90 87.22 47 IG24_SR1 SilentIntergenicRegion 0 23.77 25.12 13.78 23.76 32.66 38.69 68.00 32.27 38.25 35.11 82.41 44.79 86.82 88.79 54.64 244.66 115.37 99.96 34.22 74.43 101.36 65.38 90.87 48 IG24_AR2 ActiveIntergenicRegion 0 20.37 23.04 27.39 27.63 37.60 35.10 53.75 46.60 42.75 43.13 94.58 57.19 91.82 93.59 59.78 242.39 129.57 127.79 40.31 116.23 130.65 75.59 113.91 49 IG24_SR2 SilentIntergenicRegion 0 14.91 22.25 14.88 18.44 35.60 35.18 48.76 20.68 24.01 28.25 60.69 33.32 32.91 73.88 41.09 163.87 82.13 77.61 24.52 72.06 84.73 47.40 79.55