Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PYHIN1 Gene 0 67.98 2.24 2.44 6.79 12.75 6.88 5.03 7.66 15.60 4.18 12.55 28.22 6.37 5.37 4.02 3.14 1.98 4.93 1.35 3.06 1.19 1.56 2.46 2 458222 Transcript 0 1.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.08 0.00 4.64 0.00 0.62 0.61 0.00 1.18 1.74 0.00 0.00 0.00 0.00 0.83 0.00 3 368140 Transcript 0 18.02 0.00 0.00 0.40 2.45 1.65 0.45 1.24 1.27 0.13 1.19 2.61 0.00 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.16 0.00 4 368138 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 392254 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 392252 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 368135 Transcript 0 18.87 4.37 4.91 8.53 8.83 8.04 6.61 7.74 15.44 6.48 3.23 7.78 6.65 3.12 6.63 3.64 3.35 10.03 2.75 6.04 2.43 1.56 4.04 8 485134 Transcript 0 13.10 0.00 0.00 0.89 1.27 1.07 0.68 1.88 4.18 0.60 3.27 5.16 2.45 0.67 0.90 0.48 0.48 0.00 0.00 0.11 0.00 0.21 0.00 9 ER1a ExonRegion 0 2.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.89 0.00 7.23 0.00 1.24 1.21 0.00 2.36 3.49 0.00 0.00 0.00 0.00 1.65 0.00 10 E1a_E2e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.27 0.00 2.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2_Ad NovelBoundary 0 67.86 0.00 0.00 0.00 0.00 8.46 1.77 0.00 3.36 2.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER2a ExonRegion 0 5.03 0.00 0.00 0.00 0.00 0.00 0.17 0.00 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2b ExonRegion 0 23.28 0.00 0.00 0.00 0.00 0.00 1.32 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2c ExonRegion 0 60.32 0.00 0.00 0.00 1.67 9.63 1.65 0.00 4.79 2.29 2.17 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 0.00 1.84 15 ER2d ExonRegion 0 93.43 0.00 0.00 0.22 10.00 15.70 1.16 1.88 11.25 1.75 8.33 3.61 0.00 0.66 1.44 2.71 0.00 0.00 0.00 0.00 0.00 0.00 1.31 16 E2_Ae KnownBoundary 0 55.34 0.00 0.00 1.56 4.33 19.93 0.00 4.27 15.71 2.18 12.11 18.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER2e ExonRegion 0 34.67 0.00 0.00 1.52 13.00 6.17 3.25 4.64 12.80 1.43 13.60 19.21 2.50 1.87 1.46 2.89 0.00 0.00 0.00 0.00 0.00 0.00 1.43 18 E2a_E3a KnownJunction 0 22.23 0.00 0.00 2.03 19.78 14.42 3.49 6.08 14.35 0.00 17.74 42.91 6.82 4.94 5.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 0 70.51 0.00 0.00 5.70 15.29 10.50 4.30 4.98 17.56 1.17 22.23 47.73 10.27 7.57 1.08 1.73 0.00 0.00 0.00 0.00 0.00 1.12 0.00 20 E3_Da NovelBoundary 0 81.64 0.00 0.00 3.80 4.33 0.00 0.00 2.42 6.48 0.00 5.05 11.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E3a_E4a KnownJunction 1 83.79 0.00 0.00 3.43 10.27 0.00 9.27 9.32 11.28 1.21 11.11 94.53 0.00 9.18 0.00 3.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E3a_E4b KnownJunction 0 30.52 0.00 0.00 1.43 0.00 8.18 0.00 0.00 6.16 0.00 4.63 35.56 0.00 7.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 I3 Intron 0 18.96 0.13 0.00 1.89 2.33 1.71 1.48 0.48 3.55 0.32 0.24 3.39 0.24 0.24 0.00 0.37 0.00 0.00 0.00 0.00 0.00 0.13 0.00 24 I3_SR1 SilentIntronRegion 0 19.00 0.13 0.00 1.90 2.34 1.71 1.49 0.48 3.55 0.32 0.24 3.40 0.24 0.24 0.00 0.37 0.00 0.00 0.00 0.00 0.00 0.13 0.00 25 E4_Aa NovelBoundary 0 36.67 0.00 0.00 0.00 11.29 0.00 0.00 4.97 5.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E4_Ab NovelBoundary 0 96.31 0.00 0.00 4.23 11.80 2.73 18.64 6.12 13.54 1.42 21.37 25.06 6.82 9.24 0.00 7.09 0.00 0.00 0.00 0.00 0.00 0.00 3.93 27 ER4a ExonRegion 0 64.25 0.00 0.00 3.26 8.98 2.23 10.45 7.35 15.84 0.57 18.43 60.77 4.52 7.60 0.00 4.35 0.00 0.00 0.00 0.00 0.00 0.52 1.89 28 ER4b ExonRegion 0 76.88 0.00 0.07 8.60 15.92 7.13 8.43 4.56 24.21 0.76 28.63 73.31 10.81 8.11 0.76 7.20 0.00 0.00 0.00 0.00 0.00 3.48 2.09 29 E4a_E5a KnownJunction 0 98.91 0.00 0.00 3.86 23.51 13.97 2.16 6.78 28.44 0.00 29.01 96.33 6.82 13.89 0.00 6.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER5a ExonRegion 0 63.34 0.00 1.23 6.32 22.38 12.21 1.91 9.91 27.90 1.15 32.58 114.36 2.63 14.38 0.35 11.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E5_Da KnownBoundary 0 63.42 0.00 1.74 7.69 31.66 5.56 0.00 11.46 29.20 1.67 36.48 68.87 0.00 21.72 0.00 20.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER5b ExonRegion 0 76.96 0.00 0.27 6.96 11.97 5.39 8.54 9.13 20.91 3.73 21.73 42.37 1.33 12.02 0.82 5.15 0.00 0.00 0.00 0.00 0.07 2.51 1.73 33 E5b_E6a KnownJunction 0 3.78 0.00 0.00 1.40 4.33 6.30 2.25 2.14 10.21 0.00 2.68 0.00 5.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 E5b_E7a KnownJunction 0 69.79 0.00 0.00 3.53 4.16 2.67 4.28 12.98 20.54 0.00 16.37 27.16 0.00 11.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 35 I5 Intron 0 21.59 0.00 0.00 1.34 0.88 0.60 2.18 0.00 1.21 0.00 1.91 2.18 1.27 0.38 0.00 0.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 I5_AR1 ActiveIntronRegion 0 21.86 0.00 0.00 1.35 0.89 0.61 2.21 0.00 1.23 0.00 1.93 2.21 1.29 0.38 0.00 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER6a ExonRegion 0 33.96 8.74 9.82 15.67 13.34 9.77 10.96 13.34 20.66 12.96 3.77 15.57 7.61 6.24 13.27 7.28 6.70 20.07 5.51 12.08 4.85 3.11 8.08 38 E6_Da NovelBoundary 0 37.04 0.00 0.00 1.33 3.74 0.00 3.53 0.00 1.10 0.00 0.00 5.85 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 I6 Intron 0 28.30 0.00 0.00 3.25 7.38 2.39 1.33 0.99 6.28 0.25 1.49 9.61 1.53 1.03 0.15 0.35 0.59 0.00 0.00 0.00 0.00 0.00 0.00 40 I6_SR1 SilentIntronRegion 0 28.34 0.00 0.00 3.26 7.39 2.39 1.34 0.99 6.28 0.25 1.49 9.62 1.53 1.03 0.15 0.35 0.59 0.00 0.00 0.00 0.00 0.00 0.00 41 E7_Aa NovelBoundary 0 52.53 0.00 0.00 3.90 4.24 5.11 0.00 0.00 8.80 0.00 2.26 0.00 6.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER7a ExonRegion 0 137.73 0.19 0.00 3.44 23.51 8.01 4.77 8.97 23.35 2.19 22.13 50.93 12.77 7.07 1.23 0.81 0.62 0.00 0.00 0.00 0.00 1.48 1.25 43 E7a_E8a KnownJunction 0 508.53 3.09 0.00 9.22 53.14 8.23 10.20 4.39 15.13 2.42 24.69 66.62 0.00 9.01 0.00 3.76 4.77 0.00 0.00 0.00 0.00 0.00 0.00 44 ER8a ExonRegion 0 149.98 0.68 0.00 12.40 25.60 8.31 5.00 13.43 22.01 1.55 24.65 60.13 9.01 7.36 2.67 1.40 0.40 0.00 0.00 0.00 0.00 0.87 0.00 45 E8a_E9a KnownJunction 0 128.32 0.00 0.00 13.75 37.27 19.76 6.32 23.04 27.00 0.00 54.22 62.12 6.49 7.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 46 ER9a ExonRegion 0 232.39 0.44 0.00 7.20 23.56 8.42 2.70 13.23 26.44 3.42 34.41 57.24 11.61 9.85 2.64 1.72 0.00 0.00 0.00 1.71 0.00 2.44 0.00 47 E9_Da KnownBoundary 0 25.26 0.00 0.00 0.00 3.65 0.00 2.25 6.74 7.44 1.67 2.68 13.95 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 48 E9a_E10a KnownJunction 0 111.43 3.03 0.00 1.83 0.00 0.00 1.99 5.96 2.49 0.00 2.32 30.31 13.47 2.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 E9a_E11a KnownJunction 0 62.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.00 0.00 0.00 10.42 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER9b ExonRegion 0 13.10 0.00 0.00 0.89 1.27 1.07 0.68 1.88 4.18 0.60 3.27 5.16 2.45 0.67 0.90 0.48 0.48 0.00 0.00 0.11 0.00 0.21 0.00 51 ER10a ExonRegion 0 63.06 0.24 0.00 3.83 6.12 1.31 0.39 5.86 7.88 0.70 3.97 16.49 5.03 3.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 52 E10a_E11a KnownJunction 0 13.19 0.00 0.00 3.63 4.33 4.54 0.00 3.82 1.30 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 I10 Intron 0 13.72 0.00 0.00 0.89 3.67 0.64 1.04 1.13 2.59 0.16 1.84 2.67 0.40 0.52 0.00 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 I10_AR1 ActiveIntronRegion 0 31.09 0.00 0.00 0.72 2.08 0.59 3.68 1.26 3.49 0.00 1.62 0.00 0.00 2.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 E11_Aa NovelBoundary 0 40.97 0.00 0.00 0.00 7.98 0.00 0.00 0.00 3.12 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER11a ExonRegion 0 61.00 0.00 0.00 4.28 3.25 6.81 1.18 3.95 3.44 0.00 7.80 13.30 0.00 1.91 2.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 ER11b ExonRegion 0 31.01 0.00 0.00 0.81 4.91 3.29 0.73 2.49 2.39 0.27 2.37 5.22 0.00 2.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.00