Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 UAP1 Gene 0 109.27 95.07 66.94 68.83 64.65 66.73 64.31 56.22 39.43 63.29 80.29 274.92 88.11 72.24 220.46 51.87 119.77 44.90 43.39 49.53 93.49 173.16 83.31 2 412525 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 414807 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 271469 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 367926 Transcript 0 113.33 72.71 40.08 57.95 59.72 44.32 45.00 45.08 37.51 54.41 45.12 227.47 95.76 69.93 321.00 42.17 92.94 19.03 1.88 41.80 4.48 40.26 6.53 6 476240 Transcript 0 2.30 0.00 1.18 1.43 0.00 0.09 0.00 0.00 1.24 2.82 0.00 10.76 4.69 1.89 0.00 0.00 3.59 1.68 0.00 2.69 2.75 1.48 1.04 7 367925 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 367924 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 474728 Transcript 0 9.33 6.33 3.11 3.33 5.55 4.55 4.57 5.94 5.30 6.42 4.30 21.29 10.66 3.48 12.49 4.83 14.42 4.18 10.03 4.12 6.28 12.24 16.89 10 486089 Transcript 0 41.54 7.85 6.50 6.98 12.59 4.34 11.57 7.98 4.84 3.65 4.11 30.93 8.13 2.99 31.24 2.63 5.69 0.29 1.54 3.41 4.32 31.20 4.47 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1_Da NovelBoundary 0 3.70 5.99 0.00 1.43 0.00 20.78 1.99 1.85 4.34 8.78 7.32 0.00 0.00 4.65 13.35 12.13 9.07 11.44 25.60 0.00 9.08 2.45 18.95 13 ER1b ExonRegion 0 1.68 0.98 0.00 0.00 0.00 6.26 0.68 0.00 0.60 2.65 2.53 0.00 0.00 3.25 5.20 6.97 2.62 2.10 7.91 0.15 4.18 1.01 6.48 14 ER1c ExonRegion 0 1.92 2.57 2.14 1.82 3.68 12.61 8.04 1.89 2.05 5.97 9.42 2.73 5.80 11.65 14.18 12.65 14.11 3.98 24.77 4.00 12.84 10.35 18.96 15 E1_Ac KnownBoundary 1 3.33 21.97 13.72 9.52 6.45 13.63 8.61 8.63 7.26 25.41 30.01 6.30 12.99 16.66 28.56 4.36 48.43 18.12 24.75 9.78 40.16 19.41 11.69 16 ER1d ExonRegion 0 10.73 15.99 17.62 10.86 10.43 16.95 12.83 11.74 21.30 37.14 37.72 7.76 8.41 49.17 168.17 16.60 82.29 42.24 25.26 31.11 43.31 83.77 28.86 17 E1b_E2a KnownJunction 0 3.19 0.00 1.27 1.93 0.00 0.00 0.00 0.00 1.56 4.57 0.00 6.30 0.00 2.65 0.00 0.00 4.21 1.62 0.00 2.81 2.84 0.00 0.00 18 E1b_E3a KnownJunction 0 31.86 15.52 28.80 23.57 10.87 35.26 9.94 26.37 38.48 63.72 58.80 50.27 47.56 103.42 145.13 92.54 175.22 77.85 172.05 59.19 70.92 191.42 231.25 19 ER1e ExonRegion 0 18.64 14.24 22.34 16.51 12.86 31.60 15.94 16.35 32.02 50.51 52.04 37.80 20.38 99.63 255.20 69.27 138.76 58.70 106.46 55.65 61.62 176.30 149.77 20 ER2a ExonRegion 0 1.41 0.00 1.09 0.93 0.00 0.18 0.00 0.00 0.91 1.07 0.00 15.21 9.38 1.13 0.00 0.00 2.98 1.75 0.00 2.57 2.66 2.95 2.08 21 E3_Ab NovelBoundary 0 23.26 29.27 30.84 36.89 11.88 26.63 17.97 24.11 21.53 64.84 86.76 120.04 39.28 52.80 91.85 31.96 103.32 45.27 61.65 42.25 72.46 103.30 107.22 22 ER3a ExonRegion 0 17.01 19.40 26.25 30.82 10.09 31.74 11.56 22.67 30.93 64.01 68.62 80.26 30.49 84.20 114.71 66.99 124.93 65.38 124.35 53.44 76.96 149.21 171.12 23 ER3b ExonRegion 0 34.14 111.78 61.29 64.80 46.10 60.99 53.35 40.36 38.78 72.49 115.68 255.10 81.04 117.94 188.80 71.89 183.82 87.58 60.04 82.90 202.07 203.96 127.07 24 E3a_E4a KnownJunction 0 62.16 161.75 81.81 101.62 72.07 96.36 74.46 57.26 49.10 94.80 124.98 390.88 112.17 149.10 280.98 84.08 231.51 60.19 72.76 59.63 264.78 277.88 89.12 25 E4_Aa NovelBoundary 0 16.60 0.00 13.04 5.53 0.00 15.45 9.98 16.59 6.34 1.21 0.00 6.30 14.45 0.00 4.57 3.50 0.00 4.68 8.75 0.00 5.81 0.00 14.85 26 ER4a ExonRegion 0 84.51 176.37 74.74 102.58 89.83 90.61 74.24 76.32 62.66 83.68 131.29 463.95 164.08 133.14 251.56 86.24 224.44 80.70 75.52 83.29 186.36 265.06 123.88 27 E4_Da NovelBoundary 0 0.00 9.47 12.21 5.59 3.99 0.00 3.40 17.50 9.17 0.00 0.00 0.00 0.00 0.00 12.11 0.00 0.00 1.99 0.00 2.88 2.66 0.00 4.01 28 E4a_E5a KnownJunction 1 107.80 252.06 89.85 95.36 109.51 84.89 81.44 91.68 61.26 95.04 121.29 688.12 272.55 168.05 236.60 68.61 251.43 55.17 67.01 51.33 131.40 246.28 111.06 29 ER5a ExonRegion 0 116.84 193.78 89.87 95.43 102.43 127.22 98.53 97.21 74.23 97.38 135.72 703.33 220.19 120.76 282.71 81.30 244.12 67.66 74.54 74.18 144.68 267.54 139.36 30 E5b_E6a KnownJunction 1 93.20 193.58 121.76 116.50 142.02 107.95 132.13 108.72 57.73 101.67 116.66 912.60 171.25 109.90 351.07 88.27 259.09 53.60 101.56 49.73 174.27 259.02 92.88 31 ER5b ExonRegion 1 78.31 172.85 115.18 104.94 109.71 121.03 99.30 110.62 61.76 100.93 114.04 839.92 145.39 113.69 264.01 62.41 240.97 44.35 66.89 55.32 171.89 229.19 91.04 32 ER6a ExonRegion 0 126.14 237.24 131.31 121.10 112.84 129.95 123.74 119.97 70.96 100.25 151.59 749.65 207.88 140.21 317.92 104.11 224.19 87.52 81.90 88.95 193.24 257.97 149.79 33 E6a_E7a KnownJunction 0 182.18 247.46 136.54 163.92 119.19 209.82 184.82 106.50 59.75 121.95 131.98 735.84 206.32 137.68 369.00 136.72 173.73 88.30 104.19 91.59 184.59 259.08 148.62 34 ER6b ExonRegion 0 165.24 247.59 121.53 137.65 124.42 203.75 172.82 104.20 58.93 104.25 145.52 700.29 216.41 137.47 354.06 119.42 200.29 99.58 84.41 82.22 202.58 242.21 140.64 35 ER7a ExonRegion 0 173.66 192.08 148.48 144.56 110.42 145.35 125.71 113.29 79.71 125.70 160.19 488.07 163.52 140.13 415.03 140.24 232.68 104.80 72.61 83.01 225.88 305.61 177.02 36 E7_Da KnownBoundary 0 14.45 3.09 9.08 6.83 14.18 2.56 8.48 7.68 7.15 11.95 0.00 12.30 33.60 2.47 22.13 20.17 17.58 0.00 0.00 5.94 8.34 22.11 33.29 37 E7a_E8a KnownJunction 0 251.75 250.28 144.58 147.20 181.66 196.48 163.62 90.53 79.46 104.76 148.77 352.01 176.77 109.07 446.26 147.91 126.32 82.41 47.72 80.28 139.99 268.08 151.18 38 ER7b ExonRegion 0 9.33 6.33 3.11 3.33 5.55 4.55 4.57 5.94 5.30 6.42 4.30 21.29 10.66 3.48 12.49 4.83 14.42 4.18 10.03 4.12 6.28 12.24 16.89 39 ER8a ExonRegion 0 281.15 249.21 131.26 126.57 138.76 166.56 173.47 89.30 63.74 103.64 168.89 402.76 156.87 125.09 438.60 108.30 252.23 101.31 75.82 82.50 147.99 293.36 190.67 40 E8a_E9a KnownJunction 0 327.47 232.06 147.63 148.87 130.05 189.83 128.47 95.62 70.40 118.49 144.14 403.63 138.79 115.55 608.44 96.47 231.88 102.68 101.09 76.70 94.40 394.34 226.13 41 ER9a ExonRegion 0 259.33 153.40 138.16 123.10 119.97 123.03 119.97 86.91 71.62 124.14 132.02 420.94 118.29 124.09 455.44 91.73 200.13 93.41 75.13 94.42 167.83 286.03 169.66 42 E9a_E10a KnownJunction 0 76.98 23.09 44.85 14.65 8.15 5.45 35.51 9.98 5.30 7.68 2.68 6.30 0.00 0.00 16.81 4.36 0.00 17.53 20.99 14.45 124.79 94.24 90.40 43 E9a_E10b KnownJunction 0 13.19 3.35 8.10 7.23 3.65 2.78 18.15 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.25 0.00 2.81 10.56 26.94 16.05 44 E9a_E11b KnownJunction 0 218.19 143.40 80.16 114.54 119.44 88.64 90.00 90.16 75.03 108.82 90.23 454.95 186.84 139.86 639.10 84.34 185.88 38.05 3.76 83.60 8.96 80.52 13.06 45 ER10a ExonRegion 0 62.44 16.78 42.28 14.31 13.38 7.34 36.41 8.64 4.01 8.60 8.21 17.32 10.55 1.62 22.48 5.94 3.30 21.71 19.91 14.36 125.61 132.30 96.18 46 ER10b ExonRegion 0 61.06 14.24 49.28 25.84 13.78 7.49 52.73 6.77 6.10 9.20 7.24 5.80 11.48 1.28 25.74 4.17 3.30 28.82 21.35 24.90 158.25 203.61 111.84 47 E10a_E11b KnownJunction 0 62.97 24.54 45.00 28.80 20.54 19.19 86.07 4.35 5.01 7.60 8.63 0.00 0.00 0.00 29.17 0.00 0.00 23.63 44.24 35.28 160.74 223.44 118.91 48 ER11a ExonRegion 0 41.54 7.85 6.50 6.98 12.59 4.34 11.57 7.98 4.84 3.65 4.11 30.93 8.13 2.99 31.24 2.63 5.69 0.29 1.54 3.41 4.32 31.20 4.47 49 E11_Ab KnownBoundary 0 34.08 6.05 11.21 2.93 11.88 8.63 14.40 16.39 8.91 4.11 12.06 48.77 13.64 9.83 51.92 0.00 8.13 0.00 0.00 6.20 12.29 51.44 4.35 50 ER11b ExonRegion 0 225.47 153.41 141.53 147.32 134.27 148.76 163.75 103.71 77.21 115.77 144.82 364.00 107.37 160.25 563.19 76.19 203.16 71.14 44.93 103.42 139.80 341.73 130.90 51 E11a_E12a KnownJunction 0 254.34 142.01 145.83 178.67 185.82 163.49 159.60 90.98 77.29 116.34 138.61 409.33 74.51 150.57 514.00 97.92 207.11 76.07 66.73 121.83 113.11 256.26 142.73 52 ER12a ExonRegion 0 242.58 105.05 118.21 126.33 121.76 89.96 95.24 110.90 62.80 113.88 114.80 413.76 129.27 86.68 423.01 54.13 132.66 30.24 50.94 67.29 61.02 297.11 72.69 53 E12_Da KnownBoundary 1 379.03 123.73 51.86 80.54 100.00 115.22 114.12 44.15 22.34 42.23 19.22 408.73 211.84 60.57 483.22 34.69 37.31 8.37 19.48 14.96 5.50 110.16 30.82 54 ER12b ExonRegion 1 105.16 25.55 14.90 27.94 34.53 42.64 32.19 12.32 5.33 16.99 8.88 139.08 57.01 16.95 146.33 14.21 9.28 5.25 6.27 5.12 2.48 32.62 10.55 55 ER12c ExonRegion 0 31.32 7.32 1.23 4.09 3.75 9.90 6.09 0.69 1.98 1.61 0.39 8.66 12.19 0.00 16.83 2.38 0.66 0.37 0.00 0.00 0.00 2.08 0.00 56 ER12d ExonRegion 0 8.47 2.03 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.69 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 IG2_SR1 SilentIntergenicRegion 0 10.73 3.20 5.21 5.79 8.48 6.93 2.45 0.82 1.75 2.71 0.00 15.76 4.98 1.95 5.19 0.94 2.09 3.79 2.02 7.41 0.70 5.28 2.72 58 IG2_AR6 ActiveIntergenicRegion 0 3.03 0.00 0.00 0.73 0.00 0.00 1.24 0.00 0.00 0.00 0.00 3.40 0.00 0.38 3.20 3.81 37.64 1.31 0.00 1.93 5.44 5.08 8.40