Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	RP11-263K19.2	Gene	0	2.75	0.70	4.25	3.63	3.60	9.07	2.46	6.87	5.22	6.06	0.95	0.53	0.57	1.04	1.81	1.60	0.97	4.14	4.37	3.33	9.97	5.56	7.11
2	447623	Transcript	0	8.97	1.38	8.37	6.21	10.92	18.75	5.40	11.82	9.33	11.32	0.66	0.61	1.31	3.62	3.77	2.53	4.49	5.16	6.50	5.06	17.97	11.97	10.58
3	454348	Transcript	0	5.86	1.70	9.75	12.56	6.10	24.06	5.83	20.91	15.80	17.43	1.62	1.49	1.61	1.12	4.46	1.86	0.00	10.67	8.76	6.39	24.83	8.86	10.76
4	436772	Transcript	0	0.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.25	0.00	0.00	0.00	0.00	0.55	0.00	0.00	0.00	0.00	0.00	0.44	1.20
5	453136	Transcript	0	0.00	0.00	0.00	0.00	0.20	0.00	0.00	0.00	0.00	0.00	0.00	0.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.47	0.00
6	422665	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	430312	Transcript	0	0.55	0.09	0.33	0.54	0.22	2.73	0.67	0.34	0.40	0.60	0.26	0.16	0.28	0.39	0.48	0.26	0.43	0.57	1.11	1.26	0.93	1.20	2.00
8	ER1a	ExonRegion	0	17.95	2.77	16.73	12.43	21.83	37.51	10.79	23.65	18.65	22.64	1.31	1.21	2.63	7.23	7.54	5.05	8.98	10.31	13.00	10.13	35.95	20.88	17.40
9	E1_Da	NovelBoundary	0	23.71	0.00	13.22	16.25	4.33	18.74	2.08	12.90	14.87	27.48	5.26	0.00	0.00	2.47	4.45	7.69	4.68	16.54	13.55	8.12	33.98	5.57	19.89
10	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.06	3.76
11	Ix	Intron	0	8.83	1.41	6.77	9.89	6.82	37.83	10.44	10.15	11.09	6.74	1.79	0.00	1.79	2.61	1.42	4.13	1.53	11.71	12.55	12.82	18.88	12.56	11.57
12	Ix_AR1	ActiveIntronRegion	0	8.91	1.43	6.84	9.98	6.89	38.18	10.53	10.24	11.20	6.80	1.81	0.00	1.81	2.64	1.44	4.17	1.54	11.80	12.67	12.94	19.06	12.66	11.64
13	Ix	Intron	0	6.69	3.67	3.30	8.25	7.25	52.97	7.17	17.44	5.81	6.94	1.74	0.00	0.00	4.35	3.70	4.02	0.00	7.88	17.25	13.44	19.89	15.05	10.60
14	Ix_AR1	ActiveIntronRegion	0	6.79	3.72	3.36	8.40	7.38	53.82	7.30	17.72	5.92	7.07	1.78	0.00	0.00	4.43	3.76	4.10	0.00	8.01	17.56	13.69	20.23	15.32	10.79
15	E2_Aa	NovelBoundary	0	193.44	22.89	157.18	125.53	78.10	170.81	35.90	157.15	118.11	106.21	13.32	11.55	6.82	27.02	17.80	35.55	23.94	66.86	103.16	82.90	348.49	98.71	122.41
16	ER2a	ExonRegion	0	5.86	1.70	9.75	12.56	6.10	24.06	5.83	20.91	15.80	17.43	1.62	1.49	1.61	1.12	4.46	1.86	0.00	10.67	8.76	6.39	24.83	8.86	10.76
17	E2_Ab	KnownBoundary	0	3.11	0.00	9.88	6.06	0.00	20.39	14.84	9.69	6.77	11.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.54	0.00	11.95	11.37	17.76	0.00
18	E2_Ac	KnownBoundary	0	125.43	8.35	102.21	75.55	61.38	153.09	36.96	75.78	75.20	90.61	7.63	18.46	0.00	35.08	29.92	10.60	4.30	50.20	81.79	41.80	192.13	61.42	73.75
19	ER2b	ExonRegion	0	3.17	0.00	16.24	11.24	15.94	26.28	8.00	29.02	18.37	25.81	1.29	0.00	0.00	1.62	0.00	0.00	0.00	18.09	18.98	18.00	31.22	19.27	25.94
20	ER2c	ExonRegion	0	0.85	1.68	9.76	5.76	3.46	7.45	1.10	12.09	9.82	13.54	1.91	1.16	1.25	0.16	5.06	1.93	0.00	8.54	6.35	4.38	24.49	9.57	11.78
21	E2_Ad	KnownBoundary	0	157.44	25.32	92.22	81.71	61.29	190.52	40.23	79.89	90.45	108.55	7.26	11.40	31.17	27.96	38.45	14.10	19.17	62.55	134.97	58.87	239.08	121.43	129.41
22	ER2d	ExonRegion	0	5.98	1.38	7.24	3.29	9.29	23.79	6.97	10.52	4.94	4.66	3.13	0.00	0.00	0.53	2.47	5.51	0.00	7.34	10.77	4.19	30.92	11.70	28.76
23	E2_Da	NovelBoundary	0	7.56	2.76	26.26	10.12	12.90	52.64	11.66	10.68	16.55	22.00	0.00	0.00	6.82	2.30	0.00	6.58	4.58	30.34	11.67	8.88	29.41	8.08	8.71
24	E2a_E3a	KnownJunction	0	0.00	0.00	7.10	0.00	0.00	0.00	0.00	8.46	1.30	1.02	2.68	0.00	0.00	2.12	0.00	8.46	0.00	0.00	4.61	0.00	12.05	8.82	25.61
25	Ix	Intron	0	4.29	2.40	8.33	7.89	9.04	18.89	2.91	10.87	8.08	5.77	0.00	0.60	2.61	1.86	2.85	3.01	1.67	8.38	10.76	3.59	17.11	4.93	6.94
26	Ix_AR1	ActiveIntronRegion	0	4.81	3.52	10.18	9.66	12.90	23.19	3.60	15.54	8.79	4.15	0.00	1.54	2.19	1.28	3.00	6.42	2.85	11.06	8.10	2.90	20.04	7.50	3.96
27	E3_Aa	NovelBoundary	0	59.86	2.70	21.41	26.20	14.43	67.75	21.73	47.19	35.94	30.92	7.37	6.45	6.98	0.00	10.14	11.88	0.00	23.46	37.37	26.53	56.28	30.37	71.88
28	ER3a	ExonRegion	0	0.00	0.00	1.68	0.00	0.00	0.25	0.20	4.13	0.29	1.16	2.31	0.00	0.00	0.61	0.00	1.73	0.00	0.11	1.57	0.00	4.70	3.05	11.18
29	E3_Ab	KnownBoundary	0	27.63	3.35	6.98	19.18	8.32	58.49	3.58	23.82	7.81	15.55	7.90	0.00	6.66	2.47	0.00	11.71	0.00	7.17	27.67	6.07	40.53	8.02	26.12
30	ER3b	ExonRegion	0	0.00	0.00	1.66	0.00	0.00	0.00	1.32	2.94	0.30	0.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.40	0.00	0.00	0.00	0.00	0.00
31	E3_Da	KnownBoundary	0	7.33	3.22	10.38	2.06	0.00	51.33	15.24	23.70	8.07	7.92	4.74	0.00	6.82	12.42	4.45	0.00	4.39	16.50	4.14	5.56	24.65	8.94	26.80
32	ER3c	ExonRegion	0	1.29	0.00	2.45	0.00	2.82	0.00	0.22	2.16	1.24	1.08	2.79	0.00	0.00	0.00	0.00	0.00	0.00	1.85	0.00	0.00	0.55	0.69	4.81
33	E3_Db	KnownBoundary	0	9.93	0.00	3.52	3.73	7.89	73.03	13.43	12.57	15.25	4.65	0.00	6.00	0.00	0.00	0.00	11.88	3.93	4.97	20.42	5.94	37.44	16.90	17.33
34	E3b_E4a	KnownJunction	0	3.78	0.00	2.72	0.00	11.12	0.00	0.00	0.00	1.79	1.67	5.37	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	0.00	2.47	2.63	11.35
35	ER3d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.69	0.00	0.00	1.16	0.00	0.00	0.00	0.00	0.76	0.00	0.00	0.00	0.00	0.00	0.18	0.84
36	E3_Dc	KnownBoundary	0	30.08	11.05	7.60	19.41	7.05	105.56	20.54	18.07	3.50	2.85	2.21	0.00	0.00	0.00	6.30	7.01	0.00	7.67	11.86	3.26	2.53	16.66	22.45
37	ER3e	ExonRegion	0	0.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.25	0.00	0.00	0.00	0.00	0.55	0.00	0.00	0.00	0.00	0.00	0.44	1.20
38	E3_Dd	NovelBoundary	0	166.25	17.10	156.38	77.98	71.39	161.04	13.03	100.30	99.83	146.85	25.80	42.76	12.50	49.21	40.42	37.85	22.72	82.24	223.91	71.91	368.50	134.65	63.17
39	E4_Aa	NovelBoundary	0	3.33	0.00	7.42	9.02	24.19	21.58	5.70	27.15	12.50	14.85	0.00	0.00	0.00	4.94	8.90	3.42	0.00	13.35	28.52	9.20	14.15	5.69	24.67
40	ER4a	ExonRegion	0	0.60	0.00	0.36	0.00	2.99	0.00	0.00	0.00	0.37	0.47	0.94	0.00	0.00	0.57	0.00	1.47	0.00	0.57	0.00	0.00	1.45	2.85	4.13
41	E4_Da	NovelBoundary	0	24.08	6.31	8.66	3.53	29.12	38.05	8.70	13.76	15.28	17.70	0.00	0.00	0.00	0.00	5.19	0.00	0.00	9.04	4.80	9.14	12.48	14.76	16.48
42	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E4a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.94	0.00
44	E4a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	ER4b	ExonRegion	0	0.00	0.00	0.26	0.00	0.67	0.38	0.00	0.36	1.03	0.19	0.00	0.00	0.00	0.00	0.00	0.74	0.00	0.15	0.93	0.27	3.12	3.47	0.00
46	E5_Aa	NovelBoundary	0	0.00	0.00	13.66	9.12	0.00	29.64	3.58	5.42	6.54	2.44	0.00	0.00	0.00	2.12	0.00	0.00	4.77	3.69	39.53	2.43	8.77	3.06	4.35
47	ER5a	ExonRegion	0	3.88	0.62	2.16	3.66	1.54	15.12	4.05	2.36	2.81	4.18	1.77	1.09	0.00	2.13	3.39	1.82	3.02	3.86	7.78	7.76	5.38	6.36	8.07
48	E5_Da	NovelBoundary	0	0.00	0.00	5.56	3.33	3.40	5.39	1.90	4.11	12.79	12.03	0.00	0.00	0.00	2.30	0.00	4.27	9.07	2.57	50.26	3.26	5.75	18.55	0.00
49	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	E6_Aa	NovelBoundary	0	9.04	0.00	27.67	12.59	0.00	47.36	6.49	9.36	32.93	21.76	0.00	0.00	0.00	4.71	5.19	3.33	0.00	14.14	26.82	14.45	47.82	13.96	12.38
51	ER6a	ExonRegion	0	0.00	0.00	0.16	0.14	0.00	3.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.16	0.00	0.00	0.00	0.00	0.00
52	E6_Da	NovelBoundary	0	29.63	0.00	34.09	37.82	10.53	58.43	9.01	50.97	51.94	44.27	5.05	0.00	0.00	4.94	8.90	19.91	9.16	25.16	120.19	36.24	74.19	30.92	39.86
53	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	E7_Aa	NovelBoundary	0	61.05	11.97	75.99	30.83	53.57	128.68	21.86	75.33	97.68	96.76	10.16	5.85	19.32	19.84	28.80	33.50	13.56	78.06	97.32	54.39	304.62	56.52	89.20
55	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.04	0.67	0.03	0.00	0.00	0.04	0.00	1.95	0.58	0.00	0.00	0.00	0.00	0.00	1.07	1.16	2.04	5.96
56	E7_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.13	11.24	0.00	8.71
57	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	Ix_SR1	SilentIntronRegion	0	4.39	2.51	3.03	1.68	6.66	4.56	2.74	4.27	6.10	4.96	1.60	0.00	5.11	0.55	0.85	0.00	0.00	11.40	9.22	7.94	12.76	9.50	7.31
59	E8_Aa	NovelBoundary	0	55.94	11.58	43.49	44.65	15.03	77.46	21.68	49.66	52.14	65.65	2.26	5.70	5.84	18.78	20.15	18.71	8.88	40.91	128.00	34.26	204.11	46.78	73.41
60	ER8a	ExonRegion	0	0.72	0.01	3.68	4.17	2.75	13.12	4.53	12.26	6.13	5.85	1.30	0.00	0.00	1.47	0.70	4.03	1.13	6.60	9.66	4.37	9.72	9.10	12.04
61	E8_Da	NovelBoundary	0	88.90	6.71	37.11	53.41	42.70	131.12	21.33	81.90	67.59	108.98	17.16	0.00	12.66	32.61	15.58	23.93	29.92	56.25	123.67	46.98	339.40	68.46	152.63
62	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.06	0.00
63	Ix	Intron	0	6.78	3.01	9.45	9.01	3.30	18.07	5.55	11.42	10.43	19.79	3.33	0.00	3.87	1.67	3.11	0.00	2.44	10.64	27.47	6.81	39.62	5.65	13.02
64	Ix_AR1	ActiveIntronRegion	0	6.85	3.04	9.54	9.09	3.33	18.25	5.60	11.53	10.53	19.97	3.37	0.00	3.91	1.69	3.14	0.00	2.46	10.74	27.74	6.88	39.99	5.70	13.15
65	Ix	Intron	0	16.46	4.70	15.61	19.78	18.93	58.97	11.41	28.33	22.31	31.73	3.79	4.91	4.79	6.57	7.39	9.58	4.86	27.03	58.46	18.63	62.82	24.52	44.03
66	Ix_AR1	ActiveIntronRegion	0	23.39	5.88	16.45	23.13	16.83	58.92	10.35	35.47	26.91	40.38	3.29	6.32	5.16	7.01	10.10	10.60	7.86	29.19	63.88	25.32	85.41	28.69	51.40
67	Ix_SR1	SilentIntronRegion	0	4.42	4.25	9.80	13.33	14.36	59.07	11.06	15.37	10.42	14.78	2.88	1.06	6.91	2.34	3.31	5.32	2.95	15.34	39.88	11.42	40.75	13.67	21.02
68	Ix_AR2	ActiveIntronRegion	0	16.51	3.66	18.63	20.31	24.62	59.42	12.97	28.84	25.04	33.15	5.03	5.86	2.98	8.94	7.00	11.29	2.64	32.52	64.98	15.74	51.53	27.09	51.09
69	E9_Aa	NovelBoundary	0	7.04	3.22	1.18	6.29	8.06	26.18	7.46	4.89	3.53	4.70	0.00	0.00	0.00	2.47	5.19	4.36	0.00	6.92	17.98	9.52	19.15	0.00	7.85
70	ER9a	ExonRegion	0	0.79	0.76	2.07	0.38	1.00	0.00	0.00	0.00	1.84	1.26	0.00	0.00	0.00	0.00	0.00	1.07	0.00	2.26	1.19	1.91	2.44	2.15	2.75
71	E9_Da	KnownBoundary	0	13.56	5.20	12.39	11.22	0.00	91.31	14.26	13.92	36.11	28.55	4.74	6.00	6.82	2.41	4.94	0.00	4.02	21.89	42.92	23.14	84.26	17.76	32.69
72	ER9b	ExonRegion	0	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.61	0.00	0.38	0.00	0.00	0.00
73	E9_Db	KnownBoundary	0	3.11	2.70	4.29	3.53	7.98	11.02	2.08	1.60	4.34	1.29	0.00	0.00	0.00	4.83	0.00	0.00	0.00	4.02	8.94	5.56	19.46	0.00	11.27
74	ER9c	ExonRegion	0	0.00	0.00	0.00	0.00	0.40	0.00	0.00	0.00	0.00	0.00	0.00	1.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00