Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CLK2 Gene 0 255.62 73.36 142.81 160.42 129.59 131.52 98.80 141.49 93.79 151.62 192.37 122.81 106.56 283.23 262.95 282.59 224.22 175.30 118.81 110.67 146.01 108.66 129.00 2 471047 Transcript 0 0.00 0.44 0.00 0.02 0.66 0.00 0.59 0.00 1.99 0.76 0.42 0.00 0.00 1.17 0.09 0.03 0.00 0.60 0.00 2.34 0.01 0.01 0.00 3 368361 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.54 0.25 0.00 0.00 0.00 1.07 0.00 0.00 0.30 0.21 0.00 0.00 0.00 0.00 0.00 2.37 0.00 0.00 4 424156 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 403516 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 355560 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 476983 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 361168 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 484699 Transcript 0 129.68 22.50 96.45 97.22 58.50 70.67 57.95 85.98 71.26 112.11 138.64 83.58 82.69 261.41 173.68 249.99 180.84 158.98 82.84 76.44 139.42 90.81 108.82 10 497188 Transcript 0 120.66 33.20 60.82 63.59 65.95 66.99 55.16 76.10 51.27 81.15 93.86 67.03 77.34 151.62 119.91 167.97 113.69 95.48 74.29 54.89 82.27 55.69 77.63 11 ER1a ExonRegion 0 0.00 0.89 0.00 0.05 1.33 0.00 1.18 0.00 3.98 1.53 0.84 0.00 0.00 2.35 0.17 0.05 0.00 1.20 0.00 4.67 0.02 0.02 0.00 12 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 I1_AR1 ActiveIntronRegion 0 4.50 5.40 3.88 2.16 4.98 48.18 15.09 4.79 3.42 10.54 4.09 0.00 1.03 3.86 3.49 2.37 4.38 19.74 12.64 14.66 1.76 2.21 2.34 14 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.54 0.25 0.00 0.00 0.00 1.07 0.00 0.00 0.30 0.21 0.00 0.00 0.00 0.00 0.00 2.37 0.00 0.00 15 E2_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 7.33 1.90 0.00 0.00 0.00 10.74 0.00 0.00 2.12 4.45 0.00 0.00 0.00 0.00 0.00 8.83 0.00 0.00 16 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 3.67 1.82 1.73 0.00 0.00 9.18 0.00 0.00 1.62 3.99 0.00 0.00 0.00 0.00 1.33 6.61 0.00 0.00 17 ER2c ExonRegion 0 12.30 3.47 4.80 3.25 5.47 19.62 6.72 4.58 4.96 9.04 28.39 4.84 6.44 44.21 29.47 44.50 26.34 8.74 20.32 7.01 22.01 4.79 9.50 18 E2_Ad KnownBoundary 1 47.42 9.21 28.06 10.75 33.96 49.29 15.02 7.11 7.35 38.95 70.65 25.06 0.00 172.82 65.89 58.19 84.06 32.54 22.02 27.74 93.59 10.53 24.41 19 ER2d ExonRegion 1 24.54 11.81 32.56 18.89 15.29 26.42 14.31 20.21 11.38 52.78 95.40 8.66 0.56 139.79 79.37 59.02 88.02 42.19 17.97 27.36 79.28 18.06 18.95 20 E2_Ae KnownBoundary 1 46.30 19.60 18.07 19.98 28.10 38.05 27.69 31.22 16.26 50.53 118.14 0.00 0.00 144.86 149.21 97.41 82.19 43.90 38.02 51.26 55.48 35.39 38.93 21 ER2e ExonRegion 1 56.48 18.99 46.54 46.43 33.88 58.70 36.79 49.60 35.19 65.96 123.95 20.39 10.80 150.06 155.32 166.96 132.80 124.31 45.26 57.20 71.62 45.21 63.96 22 E2a_E3a KnownJunction 1 34.60 16.12 62.92 58.30 12.39 17.77 8.26 54.46 48.84 94.72 127.82 24.31 45.45 132.44 106.81 123.39 115.47 125.36 43.95 61.55 118.92 26.88 57.45 23 ER3a ExonRegion 1 40.28 18.42 103.83 85.81 34.00 76.68 47.57 96.30 75.39 156.21 210.86 42.98 71.96 293.86 265.71 185.18 237.50 169.59 71.54 141.48 185.08 77.56 104.60 24 E3_Ab KnownBoundary 1 68.38 25.59 138.97 101.05 14.52 67.23 52.20 125.77 81.45 174.90 172.04 43.51 66.88 218.91 279.38 236.35 168.30 188.90 73.98 164.14 143.57 84.26 103.20 25 ER3b ExonRegion 0 66.45 25.70 141.85 110.31 35.27 72.18 55.00 113.14 93.34 180.31 194.11 59.04 94.94 281.76 275.18 261.28 202.96 153.36 73.46 171.37 180.30 83.59 117.64 26 E3a_E4a KnownJunction 0 79.94 22.56 109.78 95.33 38.03 78.76 58.91 93.53 71.50 144.81 153.41 49.37 107.79 208.43 158.85 215.67 188.03 176.80 38.12 121.83 143.20 48.86 103.37 27 E3a_E4b KnownJunction 0 20.15 21.77 61.15 35.76 16.81 16.87 16.21 39.14 33.74 52.89 61.91 24.31 40.74 136.74 98.28 91.09 71.53 45.60 44.71 56.12 69.31 33.07 54.55 28 ER4a ExonRegion 0 73.02 18.30 116.41 88.93 44.82 57.76 50.64 86.85 75.03 146.23 163.81 64.94 96.15 265.14 172.62 199.88 209.61 103.94 41.41 132.45 162.52 61.46 105.72 29 ER4b ExonRegion 0 105.49 56.85 164.04 140.06 90.96 115.82 91.69 161.58 112.13 223.77 237.87 106.20 106.49 400.69 346.15 267.58 311.02 198.68 112.44 173.98 238.98 120.93 146.66 30 E4_Da KnownBoundary 0 93.87 2.96 80.25 79.61 57.22 71.21 58.52 99.11 68.03 115.43 116.50 102.33 54.70 225.91 133.75 183.88 149.51 167.60 68.61 63.73 100.02 48.19 60.44 31 E4a_E4d KnownJunction 0 72.75 30.52 61.26 66.03 26.66 59.06 38.86 56.19 47.48 86.01 67.49 66.17 61.85 190.59 174.79 115.70 123.14 136.92 25.98 97.03 76.17 32.09 81.18 32 E4a_E4e KnownJunction 0 31.64 11.64 23.59 26.40 7.81 15.45 15.77 14.29 16.84 33.85 40.33 12.15 24.51 59.92 66.38 56.82 48.81 62.43 30.31 34.20 41.76 8.57 29.79 33 E4a_E4f KnownJunction 0 11.34 12.76 24.87 3.26 15.62 22.32 4.15 40.79 24.74 17.54 19.74 23.41 0.00 28.61 36.59 40.59 20.20 27.90 35.30 3.00 20.32 5.69 18.52 34 ER4c ExonRegion 0 129.68 22.50 96.45 97.22 58.50 70.67 57.95 85.98 71.26 112.11 138.64 83.58 82.69 261.41 173.68 249.99 180.84 158.98 82.84 76.44 139.42 90.81 108.82 35 E4_Ac KnownBoundary 0 223.08 62.62 110.94 104.15 98.05 74.62 88.99 97.30 79.08 122.65 149.99 113.89 95.77 230.68 220.78 237.54 172.42 155.82 118.40 78.94 162.66 86.34 110.29 36 ER4d ExonRegion 0 87.99 45.25 82.35 86.03 91.87 88.22 68.88 78.35 67.77 99.66 122.72 95.12 80.33 247.03 160.82 222.11 166.57 143.34 78.97 74.91 127.71 76.49 94.12 37 E4_Db KnownBoundary 1 59.12 20.92 82.64 77.51 58.83 29.13 38.33 70.52 62.15 98.85 101.76 83.58 148.69 277.65 245.87 272.32 171.95 124.24 139.86 81.24 153.45 68.21 89.80 38 ER4e ExonRegion 0 81.04 19.90 53.10 44.66 42.73 51.66 32.99 67.75 57.77 92.51 120.92 69.54 96.06 189.14 147.70 185.98 139.02 115.14 95.23 52.08 112.19 56.05 74.82 39 E4_Ad KnownBoundary 0 35.78 2.89 3.05 5.16 11.97 13.46 12.14 14.21 4.51 12.76 5.00 12.30 6.49 20.78 16.19 29.22 37.68 10.40 3.86 22.18 16.06 5.20 8.02 40 E4_Ae KnownBoundary 0 48.08 20.13 19.54 7.49 8.15 23.85 24.82 9.28 6.74 17.00 22.58 5.85 20.13 18.31 18.91 10.77 23.75 37.27 8.85 28.76 20.26 2.45 11.01 41 ER4f ExonRegion 0 141.81 63.72 91.90 83.14 36.57 95.36 71.94 65.68 71.22 131.51 112.75 83.70 87.55 305.88 247.57 184.27 215.66 167.53 54.15 131.21 127.82 54.87 109.63 42 ER4g ExonRegion 0 156.29 84.61 105.48 122.72 63.74 124.61 96.16 97.20 93.55 158.72 171.80 100.51 97.32 375.15 293.44 212.33 256.41 209.17 92.68 143.82 146.44 106.01 136.17 43 E4_Dc KnownBoundary 0 103.50 42.89 44.74 59.40 31.41 63.94 54.01 64.61 34.72 74.65 54.33 71.72 45.45 97.89 80.23 105.19 66.67 82.49 51.20 30.30 80.43 51.62 53.35 44 E4c_E4f KnownJunction 0 64.53 61.50 85.30 117.43 28.78 72.00 51.63 59.52 59.95 114.89 135.67 41.71 86.52 213.20 223.38 125.01 194.30 112.55 96.76 107.19 97.48 77.46 75.20 45 ER4h ExonRegion 0 190.64 46.36 82.96 99.56 91.01 97.53 73.39 106.39 60.59 116.40 125.03 95.32 104.43 225.68 169.69 256.98 158.42 111.43 93.24 78.45 117.10 89.81 129.59 46 E4_Af KnownBoundary 0 315.24 86.83 88.23 97.22 173.94 256.95 154.61 129.47 60.82 120.37 153.09 174.21 150.96 281.42 171.70 166.28 146.80 93.77 96.47 121.76 120.96 58.66 97.66 47 ER4i ExonRegion 0 308.15 139.30 176.16 220.81 157.79 243.45 162.59 200.97 135.60 218.17 285.69 246.98 230.81 505.17 363.49 401.60 321.89 254.60 170.71 199.93 237.80 167.25 205.74 48 E4d_E5a KnownJunction 0 396.51 166.15 169.80 262.17 157.56 243.04 183.89 173.29 137.35 214.79 240.96 276.09 230.67 504.27 445.52 560.54 332.30 318.32 197.65 169.19 221.04 152.84 234.83 49 ER5a ExonRegion 0 359.68 139.15 195.13 288.64 183.09 238.89 167.62 228.16 158.24 231.54 330.99 282.86 205.08 571.59 496.73 689.98 376.70 362.27 260.23 194.65 239.20 193.20 301.41 50 E5_Da KnownBoundary 0 632.56 172.07 236.92 383.43 278.10 267.74 215.03 286.00 195.28 277.70 423.05 278.94 214.92 691.80 660.86 848.84 475.08 391.57 394.83 235.02 269.10 269.00 378.24 51 ER5b ExonRegion 0 553.72 154.41 263.73 347.54 318.61 313.12 220.17 326.25 220.92 290.22 566.66 303.42 260.63 692.82 530.58 616.93 598.01 425.29 328.02 259.55 315.55 227.25 335.83 52 E5_Db NovelBoundary 0 9.19 0.00 15.11 13.12 15.45 21.64 43.01 13.18 6.63 6.72 4.79 12.60 33.44 11.60 25.22 15.12 17.02 20.77 7.72 24.80 15.63 0.00 15.79 53 E5b_E6a KnownJunction 0 412.22 163.92 274.24 303.79 214.69 282.28 160.13 255.44 194.04 271.47 367.67 243.98 260.70 634.41 570.74 438.35 481.07 349.70 237.84 221.98 254.96 172.07 288.44 54 E5b_E7a NovelJunction 1 6.74 0.00 10.29 13.78 4.33 0.00 6.58 16.27 8.22 11.50 0.00 31.96 0.00 9.89 0.00 6.58 4.77 12.35 0.00 6.52 0.00 0.00 8.19 55 E5b_E8a NovelJunction 0 34.23 0.00 15.76 18.58 19.02 10.90 13.07 14.54 11.46 10.80 16.74 12.75 38.63 26.02 33.87 44.26 30.11 31.42 12.33 8.88 29.22 12.00 12.72 56 I5 Intron 0 12.02 7.32 11.18 7.82 13.34 13.66 23.32 15.45 8.95 13.16 12.44 15.57 8.85 14.00 17.02 18.01 17.50 7.71 7.24 11.28 7.23 7.63 10.38 57 I5_SR1 SilentIntronRegion 0 12.05 7.33 11.21 7.84 13.38 13.69 23.38 15.49 8.97 13.19 12.47 15.61 8.87 14.03 17.06 18.05 17.54 7.73 7.26 11.31 7.25 7.65 10.41 58 ER6a ExonRegion 0 446.79 137.69 255.91 332.46 212.17 272.84 198.78 277.90 185.70 282.74 418.48 329.25 296.31 510.07 467.94 551.94 467.23 370.17 263.55 227.61 269.42 196.75 255.84 59 E6_Da NovelBoundary 0 9.78 12.04 8.01 26.10 17.91 27.65 24.07 42.43 14.70 36.40 16.69 17.11 12.99 31.55 13.72 23.07 22.44 38.80 3.76 17.71 14.52 2.57 37.90 60 E6a_E7a KnownJunction 0 438.67 134.19 301.70 338.55 233.53 273.71 170.56 266.32 174.19 284.28 329.82 327.26 228.88 416.86 453.80 475.00 383.73 388.67 223.25 211.25 228.33 163.98 238.50 61 E6a_E8a NovelJunction 0 7.56 0.00 1.83 0.00 3.23 0.00 0.00 5.01 5.56 1.02 2.68 6.15 0.00 7.30 10.51 8.54 4.77 1.82 3.58 0.00 7.66 8.63 8.19 62 I6 Intron 0 27.48 10.62 22.85 34.94 37.61 34.61 36.51 40.34 20.21 37.30 23.80 30.89 30.60 23.20 25.01 35.21 30.71 20.49 24.74 23.50 18.13 16.87 24.38 63 I6_AR1 ActiveIntronRegion 1 6.77 4.50 10.57 18.67 12.33 13.82 5.84 32.84 6.82 24.35 8.04 6.03 8.29 15.11 34.45 67.83 18.92 16.30 35.84 10.49 6.69 17.34 56.79 64 I6_SR1 SilentIntronRegion 0 28.40 11.35 30.63 37.46 41.04 38.59 42.32 52.56 27.01 50.16 26.23 25.85 24.89 27.92 29.21 45.59 36.11 20.72 31.82 28.44 20.49 15.89 26.09 65 I6_AR2 ActiveIntronRegion 0 29.83 10.97 18.69 35.46 38.71 34.64 36.52 32.15 16.94 29.36 24.27 38.44 38.31 20.80 20.56 22.76 28.34 21.00 17.81 21.64 18.01 17.65 18.60 66 E7_Aa NovelBoundary 0 43.71 29.67 17.18 45.75 62.39 73.48 46.55 32.82 19.88 32.80 24.11 19.66 34.58 38.32 28.31 41.95 20.57 32.42 29.93 27.10 20.02 28.84 22.79 67 ER7a ExonRegion 0 463.83 135.56 239.48 256.42 239.63 278.08 205.51 224.68 146.64 231.43 272.80 275.17 211.89 457.93 382.69 392.95 278.14 314.64 185.82 174.69 186.62 147.03 179.91 68 E7a_E8a KnownJunction 0 603.14 182.47 268.50 294.43 360.70 365.87 205.89 259.75 170.17 229.45 337.56 435.59 256.64 535.94 521.42 429.37 380.36 337.39 185.70 206.84 227.03 209.66 190.62 69 I7_AR2 ActiveIntronRegion 0 19.44 11.15 14.52 21.44 19.07 12.32 20.69 15.18 7.07 18.27 11.66 14.91 7.87 10.14 9.44 10.59 14.03 10.96 9.17 8.16 6.65 8.85 8.85 70 ER8a ExonRegion 0 489.53 146.46 264.65 301.13 203.87 248.63 171.71 240.00 175.70 237.56 323.86 271.96 169.92 393.57 450.65 427.35 358.63 365.74 180.07 178.53 217.81 169.49 207.53 71 E8a_E9a KnownJunction 0 895.94 157.47 269.03 372.41 382.68 277.96 231.41 310.85 191.66 282.24 433.53 187.26 149.67 547.59 497.81 411.17 483.22 311.98 162.92 194.56 284.48 163.49 236.71 72 ER9a ExonRegion 0 622.33 145.66 280.24 332.72 320.86 292.21 233.07 273.28 193.09 280.25 413.41 248.34 191.39 502.93 479.20 504.65 460.77 341.39 236.18 200.97 284.60 240.06 222.55 73 E9_Da KnownBoundary 0 53.64 25.39 40.48 61.26 75.72 82.45 62.40 72.33 40.54 65.68 52.33 43.66 27.76 46.03 34.37 66.05 60.31 85.93 68.71 41.29 30.27 18.74 29.19 74 E9a_E9b KnownJunction 0 849.34 161.09 302.98 308.02 370.46 314.25 210.52 184.67 159.46 208.64 286.86 186.36 215.25 419.92 532.42 508.07 342.78 256.80 194.17 171.36 172.05 208.19 240.47 75 ER9b ExonRegion 0 67.38 29.39 45.27 52.34 71.59 61.05 43.23 71.86 38.57 53.02 47.23 37.63 23.39 48.37 48.53 78.74 52.89 90.33 50.17 42.24 25.36 27.67 25.91 76 E9_Ab KnownBoundary 0 58.53 22.50 40.83 35.29 47.03 37.54 39.75 39.06 41.46 30.81 28.11 24.61 0.00 29.43 36.96 85.19 23.56 37.93 48.00 11.57 19.71 19.29 19.89 77 E9_Db KnownBoundary 1 961.95 184.90 346.76 432.18 381.75 300.28 208.58 226.19 188.77 223.87 362.93 308.35 124.34 507.27 557.02 551.39 392.80 329.64 202.45 224.41 274.04 247.51 250.71 78 ER9c ExonRegion 0 747.31 161.67 338.05 386.55 348.63 293.18 200.52 240.18 200.50 249.07 370.79 259.23 165.32 462.74 509.53 585.14 400.37 346.53 217.14 196.45 243.42 238.56 247.17 79 ER9d ExonRegion 0 818.48 162.91 350.92 407.78 329.60 337.25 233.47 284.69 182.19 270.94 374.00 258.74 175.07 499.28 459.03 522.93 447.90 338.88 229.06 176.67 263.96 200.06 247.00 80 E9_Dc KnownBoundary 0 46.30 32.30 42.34 47.98 57.81 75.70 57.10 60.83 28.76 31.35 26.16 6.30 54.54 50.03 51.05 32.21 48.25 60.73 31.72 29.66 14.09 18.49 7.68 81 E9c_E9c KnownJunction 0 859.41 196.81 306.05 344.28 347.03 287.45 225.19 259.79 136.02 246.40 280.44 275.04 213.14 595.80 596.33 508.16 365.22 208.59 187.21 138.13 248.16 164.78 271.54 82 ER9e ExonRegion 0 90.30 33.32 46.39 46.56 64.10 51.78 59.10 54.16 35.44 34.55 35.64 36.24 31.53 40.05 42.33 60.94 43.62 59.86 34.41 34.12 17.52 21.22 28.49 83 E9_Ac KnownBoundary 0 102.02 11.64 41.54 37.36 31.49 58.03 71.90 51.92 30.44 29.31 18.11 20.41 32.95 31.90 47.10 43.07 13.65 41.99 13.08 32.09 20.02 0.00 24.41 84 ER9f ExonRegion 0 768.11 187.52 275.07 290.45 225.45 233.52 205.60 250.34 150.04 239.77 289.70 175.54 116.57 428.35 413.40 455.86 335.70 195.35 167.09 143.10 227.96 157.24 204.72 85 E9d_E10a KnownJunction 0 556.17 133.27 284.32 310.82 191.85 190.00 137.96 214.98 127.66 199.50 183.99 81.18 62.66 224.15 256.51 275.91 199.16 120.71 85.37 112.43 129.11 124.00 155.28 86 I9 Intron 0 84.75 24.72 33.93 26.42 43.50 27.43 36.65 29.42 21.20 32.70 19.39 42.75 15.35 37.98 38.16 41.14 32.20 34.40 17.75 33.21 14.32 24.58 22.10 87 I9_AR1 ActiveIntronRegion 0 85.06 24.81 34.05 26.51 43.66 27.53 36.79 29.53 21.28 32.82 19.46 42.91 15.41 38.12 38.30 41.28 32.31 34.53 17.82 33.33 14.37 24.67 22.18 88 E10_Aa NovelBoundary 0 65.94 37.03 52.22 35.49 36.33 23.57 52.16 39.72 23.26 28.82 22.01 25.51 14.61 13.66 20.77 14.53 17.20 42.53 4.52 44.93 20.76 11.14 11.87 89 ER10a ExonRegion 0 531.24 138.17 275.43 323.76 266.27 188.16 148.55 243.59 133.70 228.00 254.13 154.76 114.01 353.67 452.99 437.31 295.07 201.59 168.18 141.12 164.88 190.78 176.51 90 ER10b ExonRegion 0 661.41 140.32 81.28 168.09 283.18 125.92 110.33 49.84 24.91 29.25 75.71 101.74 48.46 151.31 273.68 255.60 113.33 60.05 191.65 30.50 44.44 108.34 80.27 91 ER10c ExonRegion 1 337.37 71.99 28.18 101.13 131.11 55.01 39.45 27.66 10.87 10.55 35.18 62.34 42.21 95.17 186.26 164.66 64.70 36.95 94.92 8.94 32.61 44.59 45.81 92 ER10d ExonRegion 0 71.96 14.24 3.68 28.62 26.76 12.84 6.62 5.19 1.24 1.15 3.87 8.66 9.38 21.11 26.11 53.50 9.90 12.93 25.48 0.00 4.41 16.67 8.81 93 IG8 Intergenic 0 2.22 3.09 10.45 1.66 5.31 1.50 3.24 5.11 14.39 7.38 4.96 3.21 1.80 3.38 2.11 4.51 3.08 11.90 5.20 8.44 1.54 0.00 2.74 94 IG8_SR2 SilentIntergenicRegion 0 1.49 4.96 11.15 1.87 5.71 1.46 4.28 3.86 15.71 8.32 5.85 4.56 2.41 3.00 2.01 5.49 3.06 11.05 4.94 6.04 1.00 0.00 4.72