Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CKS1B Gene 0 76.95 126.57 143.50 85.54 96.52 142.95 199.53 128.66 48.92 229.16 384.62 111.45 47.99 233.13 278.44 291.87 202.13 333.95 174.83 181.27 43.66 83.71 113.62 2 368439 Transcript 1 15.68 30.98 11.27 11.05 18.96 26.37 34.39 12.00 5.72 19.58 99.30 7.59 12.39 46.73 73.47 54.69 47.32 64.66 32.82 26.84 6.44 9.80 7.70 3 368436 Transcript 0 6.88 3.92 12.54 4.52 10.01 17.15 14.27 4.84 2.31 8.91 9.98 6.11 3.88 5.57 5.06 4.24 5.40 1.97 1.72 4.78 0.99 1.68 0.53 4 308987 Transcript 0 2.12 0.00 0.00 1.36 2.68 0.00 7.94 0.00 2.47 6.88 1.93 0.00 0.00 1.62 2.90 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 5 477676 Transcript 0 0.75 0.44 0.14 0.02 0.95 2.09 0.05 0.05 0.01 0.26 2.70 0.03 0.00 5.76 1.75 4.31 2.61 0.08 6.88 2.39 0.09 0.01 0.29 6 474215 Transcript 0 0.55 1.40 0.22 0.00 0.67 2.28 0.74 0.81 0.31 0.55 1.99 6.44 0.00 1.67 3.27 0.50 1.97 1.31 0.40 1.38 0.00 0.00 1.54 7 473344 Transcript 0 0.00 0.00 0.00 3.06 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 8 471245 Transcript 0 17.65 13.93 20.47 9.28 20.95 14.73 26.94 16.19 7.11 13.17 27.06 28.74 20.40 22.69 22.94 20.80 18.67 11.48 5.30 13.13 3.57 5.33 7.18 9 ER1a ExonRegion 1 39.26 80.29 9.01 10.42 51.62 64.89 95.15 15.17 7.37 24.57 129.69 9.78 29.96 82.93 111.84 101.15 75.60 88.27 53.23 48.66 6.33 8.07 8.43 10 E1_Ac KnownBoundary 1 500.53 801.50 126.37 95.46 453.57 618.39 987.96 129.47 64.93 217.02 1081.12 84.33 180.18 378.78 814.51 972.22 581.02 925.03 541.47 536.78 93.78 153.76 240.21 11 ER1b ExonRegion 1 376.74 665.23 97.65 93.19 337.31 574.32 850.15 123.69 58.90 217.84 969.71 50.87 113.15 445.72 772.82 874.92 505.66 897.54 488.95 456.25 74.10 126.05 237.13 12 ER1c ExonRegion 1 536.31 840.45 315.18 256.00 428.09 863.70 1162.56 340.97 145.12 669.07 1280.63 118.26 77.27 540.41 869.88 1954.64 724.50 2139.27 1070.07 620.57 160.60 255.74 662.20 13 E1_Da KnownBoundary 0 0.00 6.31 4.08 2.03 0.00 5.68 1.90 3.24 3.18 3.84 26.01 6.30 0.00 8.71 4.45 3.42 9.07 1.99 4.80 2.49 0.00 0.00 0.00 14 E1a_E4b KnownJunction 1 139.73 170.63 146.15 109.24 105.94 157.92 283.97 173.83 71.24 299.78 432.43 156.65 40.91 86.53 215.84 93.57 286.49 207.47 120.38 156.34 65.42 56.09 123.35 15 ER1d ExonRegion 1 4.74 6.19 10.97 7.41 1.71 5.52 4.00 10.23 5.57 14.45 105.83 6.69 7.21 32.06 27.35 25.07 43.16 38.07 17.55 22.54 10.22 6.95 10.66 16 E1b_E4b KnownJunction 1 3.04 6.45 13.84 15.32 3.57 8.69 4.02 10.60 4.22 19.72 62.38 6.30 0.00 25.19 81.22 37.85 23.19 67.65 27.67 9.33 2.78 14.39 4.01 17 ER2a ExonRegion 0 1.50 0.88 0.27 0.04 1.90 4.18 0.09 0.10 0.02 0.53 5.40 0.06 0.00 11.53 3.51 8.63 5.23 0.15 13.76 4.79 0.18 0.03 0.57 18 E2a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 I2_SR1 SilentIntronRegion 0 5.97 1.17 10.34 4.84 23.15 5.19 7.50 6.20 2.64 6.62 23.89 19.02 21.18 35.16 7.76 13.09 11.24 9.09 3.65 7.03 2.65 0.35 0.00 20 ER3a ExonRegion 0 1.65 0.00 0.14 0.00 0.00 4.08 2.21 1.34 0.00 0.51 0.64 12.03 0.00 2.89 1.29 0.00 2.20 0.82 0.00 0.95 0.00 0.00 2.61 21 ER3b ExonRegion 0 9.17 3.54 1.23 2.41 5.55 11.03 8.52 3.38 1.15 3.09 11.63 17.57 14.89 16.29 9.84 10.64 6.17 6.67 4.43 4.01 2.71 4.62 7.92 22 E3_Da NovelBoundary 0 7.56 8.29 5.88 3.53 16.13 10.62 11.13 4.23 2.81 10.48 17.90 19.06 21.75 38.32 13.35 24.78 18.05 18.78 4.80 5.88 3.15 0.00 7.85 23 E3a_E4b KnownJunction 0 0.00 0.00 0.00 3.06 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 24 E3b_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER3c ExonRegion 0 0.00 4.19 0.54 0.00 2.01 2.75 0.00 1.08 0.93 1.15 5.32 7.31 0.00 2.13 8.52 1.49 3.71 3.12 1.19 3.19 0.00 0.00 2.02 26 I3 Intron 0 5.28 5.72 8.53 5.28 9.52 10.02 12.23 6.56 4.59 8.44 25.44 25.61 10.97 21.56 10.49 14.20 13.14 3.56 2.70 7.34 2.22 2.87 3.12 27 I3_SR2 SilentIntronRegion 0 6.78 6.94 9.92 6.51 11.75 11.75 15.13 8.43 5.77 9.88 31.78 31.67 12.78 23.40 12.51 15.94 14.26 3.71 3.11 8.30 2.00 3.77 2.66 28 E4_Aa NovelBoundary 0 376.21 278.37 233.23 293.37 312.48 213.68 327.91 279.67 242.33 260.64 92.92 72.32 70.29 57.51 108.04 266.68 313.79 420.92 259.77 232.66 181.44 118.92 246.96 29 ER4a ExonRegion 0 17.65 13.93 20.47 9.28 20.95 14.73 26.94 16.19 7.11 13.17 27.06 28.74 20.40 22.69 22.94 20.80 18.67 11.48 5.30 13.13 3.57 5.33 7.18 30 E4_Ab KnownBoundary 0 23.78 17.56 26.70 10.85 52.29 17.72 31.31 11.46 1.79 13.35 39.96 31.51 21.10 9.71 28.31 14.44 41.23 15.25 4.80 13.74 0.00 2.33 4.35 31 ER4b ExonRegion 0 85.91 139.90 414.36 269.98 91.57 142.65 213.72 411.52 152.79 786.33 1448.30 242.86 103.92 796.79 1077.94 1234.18 829.56 1496.43 796.17 755.74 183.97 332.43 435.43 32 E4_Da KnownBoundary 0 3.48 5.92 18.98 3.46 0.00 2.90 14.84 0.00 0.00 2.26 11.53 6.30 0.00 0.00 4.45 0.00 8.88 3.52 0.00 2.36 0.00 0.00 0.00 33 E4a_E5a KnownJunction 1 93.57 213.78 689.48 534.20 193.21 162.75 243.51 689.10 237.32 1023.71 1122.02 550.68 286.83 856.44 1499.11 4918.54 671.34 3510.94 2137.47 1041.27 146.66 598.37 1957.55 34 ER4c ExonRegion 0 6.88 3.92 12.54 4.52 10.01 17.15 14.27 4.84 2.31 8.91 9.98 6.11 3.88 5.57 5.06 4.24 5.40 1.97 1.72 4.78 0.99 1.68 0.53 35 ER5a ExonRegion 0 196.27 595.52 626.72 368.36 514.18 745.09 1048.39 565.85 201.65 915.63 1495.65 533.22 190.85 973.42 1049.01 1000.58 696.20 1186.42 583.97 712.71 150.61 365.90 453.97 36 E5_Da KnownBoundary 0 705.24 588.12 813.16 429.22 391.17 409.99 699.58 670.53 211.80 1122.48 2025.09 693.08 297.38 1241.57 1563.88 791.59 1019.91 740.52 635.22 815.84 216.22 517.24 549.14 37 ER5b ExonRegion 0 255.33 212.38 483.11 255.90 163.86 181.93 252.82 399.80 145.31 755.33 1134.04 390.45 138.09 723.81 769.33 377.25 597.84 482.52 287.19 455.84 137.98 211.78 179.41 38 E5_Db KnownBoundary 1 139.43 191.22 416.16 213.43 109.85 106.59 276.81 380.76 131.13 695.51 860.27 171.81 35.55 743.43 898.57 442.11 386.91 472.82 277.84 493.12 105.70 232.14 194.80 39 ER5c ExonRegion 0 123.59 143.87 319.56 170.98 120.25 151.99 224.03 241.85 99.37 504.80 607.88 204.16 117.16 576.37 680.43 356.71 329.25 372.63 223.10 333.12 60.58 171.05 205.97 40 E5_Dc KnownBoundary 1 110.83 110.90 212.12 131.68 190.41 149.74 196.44 185.24 89.76 380.53 588.94 245.78 176.94 472.43 593.86 209.35 336.61 245.78 168.66 285.26 60.17 120.45 90.31 41 ER5d ExonRegion 0 31.22 72.30 105.73 61.01 88.97 108.91 170.00 92.47 41.76 207.85 228.20 137.98 47.71 190.61 224.92 104.08 120.99 102.53 76.64 111.19 19.72 52.86 30.25 42 ER5e ExonRegion 0 8.16 21.21 3.33 5.26 8.79 33.53 58.82 1.23 2.47 27.03 6.90 19.79 7.37 17.17 22.80 25.05 10.85 11.09 3.19 7.29 0.94 3.87 11.33 43 ER5f ExonRegion 0 2.12 0.00 0.00 1.36 2.68 0.00 7.94 0.00 2.47 6.88 1.93 0.00 0.00 1.62 2.90 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 44 IG40_AR1 ActiveIntergenicRegion 0 3.63 14.58 8.11 7.59 15.13 16.67 15.51 11.18 10.97 17.26 14.84 31.38 12.43 16.33 9.47 6.90 9.33 17.08 18.01 20.84 1.78 6.31 3.86