Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	VPS72	Gene	0	51.39	70.18	107.07	77.77	46.80	80.84	37.45	68.18	47.44	105.01	72.15	29.75	32.98	81.11	94.72	77.44	63.22	87.78	90.01	70.77	50.26	40.30	39.82
2	463470	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	368892	Transcript	0	0.81	0.00	0.94	0.21	0.41	6.07	2.24	0.00	1.81	1.01	0.74	0.00	0.00	4.06	2.45	6.17	0.76	1.99	2.57	0.33	1.19	4.81	4.86
4	491094	Transcript	0	0.95	0.24	0.18	0.19	0.33	0.22	0.21	0.21	0.28	0.28	0.29	0.34	0.33	0.66	0.49	0.77	0.23	0.26	0.31	0.43	0.21	0.07	0.17
5	354473	Transcript	0	11.98	8.40	13.10	12.93	6.85	11.38	5.86	11.57	8.16	17.37	7.29	2.99	7.52	13.18	19.37	24.64	4.27	15.38	11.67	6.45	5.38	3.98	13.47
6	496809	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	471423	Transcript	0	5.64	13.05	23.41	15.21	18.90	25.98	14.49	16.76	6.06	14.40	4.44	0.75	3.87	5.44	14.78	7.10	4.12	16.60	8.43	10.24	6.00	2.01	4.62
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER2a	ExonRegion	0	0.81	0.00	0.94	0.21	0.41	6.07	2.24	0.00	1.81	1.01	0.74	0.00	0.00	4.06	2.45	6.17	0.76	1.99	2.57	0.33	1.19	4.81	4.86
11	E2_Ac	KnownBoundary	1	91.87	121.23	12.71	6.83	88.03	142.65	70.48	4.48	4.89	4.41	62.96	0.00	11.85	190.48	83.94	91.26	28.42	38.05	83.86	25.69	34.22	21.49	67.95
12	ER2b	ExonRegion	1	61.87	79.78	35.25	23.58	53.51	136.07	65.14	20.11	9.84	33.26	46.13	0.00	3.13	135.99	98.74	68.95	32.35	13.37	72.41	37.66	46.35	31.81	54.92
13	E2_Ae	KnownBoundary	1	445.26	420.85	255.43	194.38	230.98	800.79	319.83	172.35	76.94	258.52	180.36	0.00	39.12	144.39	674.83	242.24	280.13	116.03	511.07	275.99	212.82	175.99	217.76
14	ER2c	ExonRegion	1	222.72	238.55	181.64	139.01	135.64	488.78	189.94	112.88	59.10	200.00	118.20	0.00	26.70	242.49	512.63	168.04	184.60	42.92	292.81	187.89	149.51	124.85	140.28
15	ER2d	ExonRegion	1	243.40	268.43	228.53	166.27	141.81	560.23	211.17	137.41	71.64	238.56	129.50	0.00	28.14	231.44	588.95	176.84	229.41	47.12	336.06	221.28	166.38	135.43	146.83
16	ER2e	ExonRegion	1	233.82	269.18	270.29	182.48	132.80	595.60	204.52	152.56	83.27	276.46	119.84	0.00	32.83	177.46	583.15	173.17	240.62	43.76	329.60	257.33	157.51	132.03	136.01
17	ER2f	ExonRegion	1	70.84	101.20	268.80	146.84	74.20	193.78	73.86	169.80	106.52	308.78	205.89	34.09	48.24	103.32	141.43	126.73	182.38	112.90	259.75	148.86	143.17	52.26	75.19
18	E2b_E3a	KnownJunction	1	29.04	56.83	392.80	226.94	54.67	87.28	46.77	263.94	159.63	443.95	587.83	84.63	88.79	370.77	269.49	168.42	582.89	192.39	421.75	305.33	362.02	81.93	136.50
19	E3_Aa	NovelBoundary	0	3.48	6.31	6.86	8.16	8.32	0.00	23.54	11.95	4.63	8.14	0.00	0.00	0.00	0.00	0.00	4.19	0.00	4.44	8.94	0.00	0.00	0.00	0.00
20	ER3a	ExonRegion	0	51.50	117.47	404.15	280.49	105.32	209.94	73.79	264.35	168.40	415.99	289.20	101.11	108.76	340.68	447.89	337.19	246.68	351.92	550.05	310.71	154.14	148.07	238.19
21	E3_Da	KnownBoundary	0	3.19	13.29	23.54	24.71	11.12	11.19	14.40	16.68	5.99	17.62	0.00	0.00	5.84	2.47	14.96	11.79	9.16	12.81	0.00	8.63	5.00	0.00	11.01
22	E3a_E3b	KnownJunction	0	44.67	192.93	365.95	235.40	491.94	843.61	320.97	253.14	171.50	422.27	331.19	125.74	119.80	297.61	447.00	240.36	237.12	327.77	385.14	270.31	163.65	99.38	131.03
23	ER3b	ExonRegion	0	5.64	13.05	23.41	15.21	18.90	25.98	14.49	16.76	6.06	14.40	4.44	0.75	3.87	5.44	14.78	7.10	4.12	16.60	8.43	10.24	6.00	2.01	4.62
24	E3_Ab	KnownBoundary	0	16.08	8.81	19.87	20.94	29.29	43.90	27.43	22.71	5.96	13.59	7.53	0.00	6.17	4.94	22.25	12.65	0.00	18.99	9.60	5.18	5.00	2.76	0.00
25	ER3c	ExonRegion	0	88.34	261.11	371.75	229.15	252.69	712.48	285.98	230.01	174.54	403.90	303.88	131.51	64.14	256.43	317.32	208.94	230.86	268.85	285.09	262.63	198.69	112.82	88.69
26	E3_Db	KnownBoundary	0	130.10	258.90	368.67	213.39	71.31	149.52	107.14	193.17	141.95	313.32	147.46	73.22	27.60	144.98	215.34	113.90	115.01	132.44	101.65	226.08	77.16	90.32	36.96
27	E3_Dc	NovelBoundary	0	78.24	186.28	79.09	82.01	48.39	107.32	53.92	60.99	54.14	111.24	80.39	67.22	37.01	70.93	78.25	136.72	72.74	65.70	70.87	145.03	73.58	83.83	44.39
28	ER3d	ExonRegion	0	141.57	333.85	366.93	266.90	83.10	194.99	96.72	224.60	172.98	375.93	208.97	114.49	51.33	215.11	255.95	212.51	153.49	225.73	172.72	295.86	121.57	134.97	63.79
29	E3d_E4a	KnownJunction	0	316.65	593.91	349.13	333.49	146.01	233.45	122.42	270.88	192.56	388.48	226.69	59.72	45.78	278.59	280.36	243.27	259.28	322.05	283.68	304.57	157.04	147.33	129.50
30	ER3e	ExonRegion	0	200.80	419.30	343.41	274.88	101.68	200.34	94.75	234.21	171.06	362.71	225.79	94.98	52.47	260.87	287.59	211.95	202.18	238.36	225.96	291.89	150.95	152.88	93.05
31	E4_Aa	NovelBoundary	0	7.56	20.85	10.97	18.58	33.70	16.24	13.82	10.60	2.81	6.18	0.00	7.65	13.80	0.00	0.00	7.52	4.77	4.52	4.52	0.00	0.00	0.00	0.00
32	ER4a	ExonRegion	0	231.12	331.68	362.45	285.00	137.61	275.07	126.61	242.14	181.02	380.60	247.79	127.66	105.83	321.48	356.36	281.38	227.31	367.62	254.81	252.95	205.80	153.32	133.61
33	E4_Da	NovelBoundary	0	7.33	9.27	2.69	17.18	23.85	35.32	5.92	10.88	4.51	9.62	2.42	0.00	13.15	4.24	9.64	16.58	0.00	6.72	0.00	11.82	2.47	2.69	4.35
34	E4a_E5a	KnownJunction	0	173.51	377.24	437.42	437.77	232.17	468.31	239.98	320.13	227.43	462.16	262.22	191.46	119.47	428.40	436.99	498.67	232.35	475.72	472.11	331.15	206.15	263.55	216.91
35	E4a_E6b	NovelJunction	0	0.00	9.41	24.16	23.57	8.40	5.79	6.62	19.67	12.09	18.78	9.48	0.00	0.00	7.06	0.00	4.10	18.51	27.40	9.22	15.21	4.82	0.00	4.35
36	I4_AR1	ActiveIntronRegion	0	3.98	3.33	3.34	6.85	30.48	10.90	15.19	0.00	3.00	1.52	0.29	2.75	2.66	5.11	2.00	1.97	8.97	12.53	10.59	4.11	1.55	3.43	8.10
37	I4_SR2	SilentIntronRegion	0	17.07	7.99	13.62	14.29	17.75	10.62	8.23	10.68	6.49	11.69	3.61	3.70	4.98	6.14	6.62	5.52	2.74	5.53	4.62	7.93	3.20	2.60	3.65
38	E5_Aa	NovelBoundary	0	7.19	3.22	17.59	5.96	19.86	7.78	3.75	20.25	12.07	20.74	2.05	6.30	0.00	9.71	13.35	11.88	0.00	18.70	12.05	5.62	2.35	2.57	8.11
39	ER5a	ExonRegion	0	177.57	312.74	410.14	333.11	184.77	338.18	161.03	294.45	192.92	418.14	282.46	135.26	131.48	342.47	375.96	344.50	266.94	428.35	311.79	245.00	196.10	177.95	155.74
40	E5a_E6a	KnownJunction	0	0.00	0.00	2.96	4.13	0.00	0.00	2.25	1.89	1.68	7.01	2.47	0.00	0.00	0.00	0.00	8.37	0.00	2.11	3.86	0.00	0.00	0.00	7.60
41	E5a_E6b	KnownJunction	0	221.45	269.23	484.19	357.86	229.20	323.90	139.33	363.63	230.90	494.56	295.60	165.05	137.82	326.68	390.38	340.59	257.69	541.30	346.83	284.50	207.39	188.84	210.16
42	I5	Intron	1	57.42	15.33	11.47	17.86	23.53	18.89	8.98	8.41	4.62	6.03	6.31	6.14	10.12	24.20	29.80	52.25	8.29	12.01	39.21	16.57	5.54	23.56	26.56
43	I5_AR1	ActiveIntronRegion	1	57.70	15.40	11.53	17.94	23.64	18.98	9.03	8.45	4.65	6.06	6.34	6.17	10.17	24.32	29.95	52.51	8.33	12.07	39.41	16.65	5.56	23.67	26.69
44	E6_Aa	NovelBoundary	1	38.23	3.03	16.17	20.74	23.68	19.31	14.71	23.04	13.95	14.37	11.16	12.60	45.78	32.49	43.64	26.92	3.46	11.52	17.32	37.78	8.65	6.12	3.67
45	ER6a	ExonRegion	1	23.97	16.81	23.25	21.73	13.69	22.76	9.46	21.25	14.64	27.73	12.11	5.98	15.04	26.37	38.74	40.91	8.54	28.64	19.49	12.89	10.76	7.97	19.35
46	E6_Ab	KnownBoundary	1	56.68	22.36	29.74	24.97	23.51	34.70	12.72	22.47	21.90	35.16	2.37	6.60	27.11	34.61	64.03	71.69	4.30	29.27	24.09	9.08	8.46	10.53	21.77
47	ER6b	ExonRegion	0	204.08	307.10	452.30	317.13	195.42	280.67	136.32	271.59	197.92	428.84	312.15	114.38	156.79	329.79	368.42	310.18	277.02	432.78	351.61	272.55	222.47	166.48	163.14
48	E6_Da	KnownBoundary	0	237.89	264.23	490.88	397.42	216.47	296.31	185.31	247.80	167.94	403.65	212.53	78.93	174.34	270.59	307.31	263.18	248.43	307.63	388.34	213.23	175.76	157.62	144.61
49	ER6c	ExonRegion	0	165.38	135.77	262.14	200.95	121.39	125.49	72.08	147.63	94.25	200.94	121.54	51.97	78.28	147.53	158.80	127.76	89.23	117.70	160.72	141.70	85.69	106.64	60.99
50	E6_Db	KnownBoundary	1	17.86	6.12	10.88	11.09	6.71	15.96	12.54	16.02	6.05	8.68	2.53	12.45	33.60	9.65	5.44	31.44	11.69	3.81	4.33	18.60	2.97	7.96	8.28
51	ER6d	ExonRegion	0	15.71	18.26	10.83	13.48	15.41	11.64	8.99	10.53	7.04	9.67	8.16	5.07	18.02	10.61	5.95	18.89	7.40	1.39	7.62	10.33	1.07	3.86	9.35
52	E6_Dc	KnownBoundary	0	3.78	3.22	6.24	5.66	15.20	0.00	6.18	10.76	7.55	9.99	7.58	24.76	6.01	14.48	8.90	11.36	4.77	4.52	11.86	8.44	0.00	0.00	0.00
53	ER6e	ExonRegion	0	9.05	2.85	2.73	2.90	4.94	1.17	2.46	2.89	3.61	3.45	4.30	5.17	4.96	8.05	6.57	10.57	3.46	3.85	4.66	6.42	2.17	1.06	2.50
54	E6d_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	ER7a	ExonRegion	0	0.92	0.00	0.00	0.00	0.00	0.00	0.00	0.22	0.00	0.00	0.00	0.00	0.00	1.86	0.00	1.02	0.00	0.00	0.00	0.00	0.96	0.00	0.00
56	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER8a	ExonRegion	0	0.43	0.00	0.00	0.00	0.00	1.92	0.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	ER9a	ExonRegion	0	2.18	0.79	0.00	0.00	0.00	0.14	0.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
60	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
61	Ix	Intron	0	15.25	2.25	3.04	1.13	4.45	4.07	3.67	4.28	0.00	3.79	4.29	3.95	6.12	10.38	3.88	18.12	1.83	0.00	5.30	4.72	0.00	2.31	3.26
62	Ix_SR1	SilentIntronRegion	0	15.59	2.30	3.10	1.15	4.55	4.14	3.75	4.36	0.00	3.87	4.36	4.04	6.20	10.61	3.93	18.49	1.83	0.00	5.42	4.82	0.00	2.34	3.33
63	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
64	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	Ix	Intron	0	22.82	2.25	11.61	1.68	9.99	3.29	5.67	9.61	3.05	2.13	11.75	11.44	8.96	16.51	11.49	16.02	7.31	5.33	7.48	7.65	4.57	0.86	3.25
66	Ix_AR1	ActiveIntronRegion	0	22.94	2.26	11.67	1.69	10.04	3.31	5.70	9.66	3.07	2.14	11.82	11.49	9.01	16.59	11.55	16.11	7.35	5.36	7.53	7.68	4.59	0.87	3.26
67	ER11a	ExonRegion	0	0.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.65	0.00	0.00	0.00	0.00	0.00	0.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
69	Ix	Intron	0	14.76	2.43	5.09	0.81	3.20	2.92	5.28	1.54	1.47	3.40	4.62	2.28	7.69	8.51	4.90	9.47	7.23	4.40	2.54	3.81	0.44	1.25	1.17
70	Ix_SR1	SilentIntronRegion	0	15.23	2.51	5.23	0.84	3.30	3.02	5.45	1.59	1.51	3.51	4.77	2.36	7.87	8.75	5.05	9.78	7.47	4.54	2.62	3.94	0.44	1.29	1.21
71	ER12a	ExonRegion	0	0.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
72	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
73	Ix	Intron	0	14.16	0.47	2.53	2.34	4.32	1.69	1.22	1.78	1.70	3.55	4.46	5.76	5.35	7.41	10.67	7.54	6.09	1.27	0.00	2.95	0.51	0.96	4.74
74	Ix_AR1	ActiveIntronRegion	0	14.29	0.47	2.55	2.36	4.36	1.71	1.23	1.80	1.71	3.58	4.50	5.81	5.40	7.48	10.77	7.61	6.15	1.28	0.00	2.97	0.51	0.97	4.79
75	ER13a	ExonRegion	0	0.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00