Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 UBE2Q1 Gene 0 143.12 92.42 138.95 119.90 135.77 156.09 103.48 122.80 96.86 168.60 283.51 170.12 156.81 264.89 252.02 210.99 198.29 107.59 168.86 104.52 119.12 157.69 127.49 2 497453 Transcript 0 3.78 1.42 0.01 1.71 2.23 4.93 2.01 2.93 1.70 1.65 2.64 4.07 1.35 3.58 2.88 2.84 3.00 1.90 5.16 0.52 0.63 1.15 0.00 3 292211 Transcript 0 62.62 54.38 75.04 55.61 70.59 64.93 47.09 58.57 45.45 81.46 116.52 54.39 47.77 103.43 100.06 70.78 74.27 44.04 77.49 54.05 47.68 65.71 48.54 4 483639 Transcript 0 30.42 6.58 10.90 11.66 14.58 19.32 9.70 16.42 5.71 13.00 27.12 10.97 3.67 18.81 17.71 13.18 13.41 7.66 13.36 2.67 6.78 4.02 6.32 5 467683 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 474181 Transcript 0 32.85 4.20 8.71 15.62 11.83 15.30 9.48 12.97 9.32 13.71 26.17 11.03 7.89 25.29 17.46 21.45 15.28 11.39 13.98 9.27 8.85 7.59 7.08 7 491572 Transcript 0 20.84 7.67 10.15 12.69 7.96 15.42 8.86 10.02 9.03 13.91 26.76 32.19 30.91 30.36 35.34 35.82 21.33 13.08 21.15 13.86 8.25 12.13 12.35 8 476612 Transcript 0 12.21 0.88 6.68 6.74 5.83 2.34 3.64 4.27 2.16 3.83 13.72 2.09 1.13 10.67 13.61 8.28 6.92 2.10 4.58 3.80 2.80 2.66 3.16 9 IG33_AR2 ActiveIntergenicRegion 0 4.61 6.96 3.32 11.50 2.07 15.72 6.73 4.09 1.38 13.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.92 10.43 8.72 0.00 0.00 0.00 10 IG33_AR1 ActiveIntergenicRegion 0 1.47 14.13 9.62 24.45 14.56 11.36 7.66 11.18 5.11 24.73 0.00 0.21 0.22 0.07 0.36 0.00 0.38 6.76 14.75 13.55 0.00 0.00 0.00 11 ER1a ExonRegion 0 0.00 0.00 0.02 0.00 0.00 0.03 0.02 0.00 0.00 0.00 0.81 0.00 0.00 0.03 0.86 0.00 0.00 0.00 0.00 0.00 0.00 0.88 0.00 12 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 7.65 5.13 7.27 5.37 3.96 6.46 3.83 4.64 6.70 14.20 32.33 3.30 1.53 42.31 28.49 21.97 18.71 13.23 17.80 6.79 21.99 15.74 15.38 14 E2_Ab KnownBoundary 1 38.90 22.63 34.98 26.64 15.53 31.63 32.28 20.66 43.23 57.75 96.60 12.45 5.68 167.87 182.46 75.62 96.96 54.43 41.60 27.16 33.67 56.52 40.29 15 ER2b ExonRegion 1 37.55 34.17 49.97 42.09 29.82 79.80 41.07 41.82 45.80 89.01 199.30 18.29 28.72 234.54 209.31 132.78 140.77 81.54 88.87 59.10 112.12 98.50 95.57 16 E2a_E3a KnownJunction 1 124.61 79.00 147.90 123.69 78.01 197.50 78.17 123.26 115.28 207.35 462.06 94.53 171.42 441.11 440.94 327.18 260.50 185.42 269.28 130.39 189.66 193.50 184.56 17 ER3a ExonRegion 0 102.32 82.39 144.16 123.96 113.60 193.13 123.23 109.25 130.11 220.86 429.75 137.72 205.78 485.91 444.00 279.44 356.97 160.38 231.83 140.38 223.18 219.09 166.16 18 E3a_E4a KnownJunction 0 226.93 137.41 188.64 209.16 209.59 263.48 171.88 179.33 175.09 291.26 673.75 488.71 511.33 640.95 520.92 351.02 524.54 224.43 385.33 196.23 324.15 330.17 298.09 19 ER4a ExonRegion 0 172.06 140.74 245.95 223.99 202.92 222.15 190.84 238.12 206.43 359.19 666.26 435.54 398.83 681.68 615.78 500.62 500.38 288.78 376.63 224.25 338.87 364.40 296.82 20 E4a_E5a KnownJunction 0 231.82 159.91 287.57 267.93 239.22 226.40 179.52 265.26 247.80 376.17 697.07 534.77 407.93 715.23 615.37 528.58 528.94 238.36 356.43 292.61 358.56 358.83 269.66 21 ER5a ExonRegion 0 151.27 143.63 280.25 261.78 186.67 250.58 130.53 265.20 243.20 373.94 816.44 444.41 399.30 685.22 604.54 528.34 644.65 235.10 407.35 269.17 305.62 385.29 284.91 22 E5a_E6a KnownJunction 0 190.26 191.68 278.35 273.76 230.90 309.42 169.94 256.92 217.39 362.53 800.99 392.38 453.05 751.90 687.81 502.77 630.01 223.02 443.68 259.44 270.46 433.78 259.25 23 ER6a ExonRegion 0 207.57 167.99 309.96 326.60 337.81 501.55 302.52 307.66 260.79 475.98 879.55 592.74 525.33 839.55 633.94 612.29 630.98 282.63 433.90 251.72 335.03 508.85 374.83 24 E6_Ab KnownBoundary 0 335.69 236.27 454.48 380.60 625.21 735.54 502.35 387.00 310.12 559.00 943.29 677.02 660.35 1012.31 915.76 706.99 690.13 323.13 478.23 278.55 389.69 564.02 510.90 25 ER6b ExonRegion 0 241.91 171.84 363.16 333.54 446.79 519.80 312.88 317.80 249.02 468.98 853.24 718.10 740.60 895.66 844.59 716.76 649.68 314.41 437.77 222.53 329.05 511.88 472.53 26 E6a_E7a KnownJunction 0 415.18 227.00 343.63 365.45 410.95 416.92 284.98 290.89 235.56 446.58 826.00 740.04 649.63 801.88 870.51 737.33 563.81 351.11 463.07 198.53 335.95 598.31 428.61 27 ER7a ExonRegion 0 413.84 216.95 294.91 314.10 322.32 383.61 290.13 315.27 247.33 454.98 841.99 682.83 480.81 830.50 673.64 637.64 590.39 280.14 445.39 228.96 364.78 571.20 358.82 28 E7_Da KnownBoundary 0 16.15 3.35 13.93 5.56 20.20 5.79 16.56 8.38 9.29 15.71 16.69 6.15 6.82 25.66 5.19 0.00 13.74 0.00 8.75 3.13 0.00 0.00 11.44 29 E7a_E7b KnownJunction 0 996.62 292.65 319.53 312.15 438.96 399.94 362.62 336.44 272.28 467.37 1162.61 808.76 452.24 839.78 797.70 596.68 764.75 323.38 418.84 271.90 458.39 556.49 405.90 30 ER7b ExonRegion 0 30.42 6.58 10.90 11.66 14.58 19.32 9.70 16.42 5.71 13.00 27.12 10.97 3.67 18.81 17.71 13.18 13.41 7.66 13.36 2.67 6.78 4.02 6.32 31 E7_Ab KnownBoundary 0 62.09 9.54 10.79 11.62 15.45 30.78 19.25 15.85 10.45 14.24 29.90 5.85 6.66 31.26 19.78 20.93 13.09 9.78 18.73 5.75 5.19 10.65 4.35 32 ER7c ExonRegion 0 707.73 274.19 345.60 311.83 344.90 429.66 266.31 359.14 275.51 453.91 1081.42 686.22 485.57 788.10 662.69 577.14 662.82 348.73 413.41 234.86 443.39 461.29 336.44 33 E7_Db NovelBoundary 0 56.01 21.77 10.56 27.20 31.24 69.16 15.90 36.64 12.21 28.88 26.69 18.61 20.45 29.49 13.97 25.89 32.73 17.74 23.53 6.26 6.24 11.63 8.71 34 E7b_E8b KnownJunction 0 795.92 314.88 374.17 332.26 297.20 550.08 264.53 343.38 249.62 444.75 951.19 600.05 410.53 707.34 685.09 630.43 563.25 322.09 415.82 246.15 385.61 440.58 360.15 35 E7b_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E7c_E8a NovelJunction 0 0.00 0.00 7.10 13.82 0.00 0.00 0.00 16.84 8.65 18.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.27 0.00 0.00 0.00 0.00 0.00 37 ER7d ExonRegion 0 11.35 4.25 0.00 5.14 6.69 14.75 6.02 8.80 5.11 4.95 7.12 12.20 4.05 10.70 7.78 8.51 9.00 5.71 15.49 1.55 1.90 2.56 0.00 38 ER8a ExonRegion 0 59.69 6.47 12.84 23.63 15.78 24.52 12.29 21.59 18.67 22.56 40.88 13.37 13.10 36.75 24.58 28.70 18.64 20.39 17.73 10.29 16.01 13.19 10.26 39 E8_Ab KnownBoundary 0 108.02 15.13 15.29 33.30 15.62 47.59 8.39 23.33 26.13 18.86 25.32 6.30 6.82 37.61 29.30 43.75 29.64 33.41 31.06 8.95 20.14 5.51 23.13 40 ER8b ExonRegion 0 476.38 248.64 288.08 317.79 362.92 602.10 367.99 333.80 239.61 441.41 863.06 632.49 612.83 846.17 731.31 733.52 617.56 344.19 447.58 262.81 350.78 480.83 395.83 41 E8_Da KnownBoundary 0 49.64 3.35 10.53 24.94 28.18 20.27 28.04 15.61 9.64 19.47 60.07 12.30 0.00 32.08 24.23 35.89 22.81 2.03 0.00 13.68 11.80 3.12 0.00 42 E8a_E8c KnownJunction 0 494.90 245.48 283.43 305.22 545.84 705.67 410.71 325.06 237.03 416.04 916.92 682.12 645.90 1046.68 851.97 774.07 701.54 356.79 613.38 247.81 367.02 509.16 482.13 43 ER8c ExonRegion 0 33.66 6.14 13.29 22.40 19.58 21.19 12.83 17.33 9.04 17.49 35.89 17.13 10.57 34.32 26.65 35.35 23.25 12.03 19.92 16.46 10.44 7.60 10.84 44 E8_Ac KnownBoundary 0 51.34 3.35 16.06 11.29 24.02 17.15 9.76 22.10 4.54 10.48 39.01 12.30 0.00 32.67 33.50 44.86 4.02 2.57 8.94 13.87 5.44 3.00 12.63 45 ER8d ExonRegion 0 426.44 179.52 370.29 324.32 418.06 499.49 292.05 359.58 262.53 442.94 784.69 774.38 700.03 864.51 776.59 779.11 566.62 418.01 472.92 259.50 382.15 428.34 475.99 46 E8b_E9b KnownJunction 0 557.06 184.57 447.26 378.54 363.84 445.43 274.78 355.95 247.77 440.43 752.09 960.16 759.53 855.26 902.04 907.97 608.13 389.12 566.32 265.00 311.17 392.87 512.61 47 E9_Aa NovelBoundary 0 70.09 2.50 15.02 11.65 3.99 15.84 2.03 14.66 6.83 9.19 27.69 12.15 7.14 23.43 21.14 44.09 13.37 9.29 21.27 15.28 10.93 2.94 12.63 48 ER9a ExonRegion 0 20.84 7.67 10.15 12.69 7.96 15.42 8.86 10.02 9.03 13.91 26.76 32.19 30.91 30.36 35.34 35.82 21.33 13.08 21.15 13.86 8.25 12.13 12.35 49 E9_Ab KnownBoundary 0 18.00 6.51 5.26 14.05 0.00 15.28 8.48 5.05 1.77 7.52 14.95 24.31 20.45 14.07 29.92 24.18 17.48 4.85 18.17 16.04 0.00 2.57 0.00 50 E9_Ac NovelBoundary 0 325.24 105.97 264.48 282.41 164.26 243.04 132.09 229.81 169.47 272.89 359.20 336.56 369.94 510.33 547.75 605.65 323.23 275.25 387.49 167.72 199.73 359.26 332.15 51 ER9b ExonRegion 0 448.23 157.26 403.76 372.37 255.98 391.31 197.12 344.35 246.68 429.26 703.15 782.43 663.12 838.32 876.34 914.09 556.75 437.51 570.00 262.17 311.46 437.31 497.76 52 E9a_E10a KnownJunction 0 444.45 240.94 349.51 348.94 216.04 360.42 174.84 282.26 215.97 384.93 818.21 536.57 518.63 871.39 758.52 1011.44 611.22 346.51 749.20 283.22 381.35 440.51 484.52 53 ER9c ExonRegion 0 377.30 182.21 365.85 362.80 194.97 329.96 163.95 308.01 231.05 398.17 736.63 570.34 597.04 845.03 792.72 940.18 560.49 391.78 651.30 259.15 349.36 470.74 491.69 54 ER9d ExonRegion 0 5.19 0.00 0.00 0.82 0.13 0.18 3.31 0.00 0.25 1.09 1.74 2.60 0.00 4.79 1.16 0.30 3.96 1.76 4.30 1.06 0.11 1.98 0.15 55 ER10a ExonRegion 0 300.87 230.47 383.10 338.04 204.17 303.02 194.86 320.44 239.65 425.81 913.38 510.22 416.99 712.94 736.65 791.94 665.48 363.89 561.11 271.44 415.30 426.74 374.02 56 E10_Da KnownBoundary 0 337.91 282.25 460.57 371.81 243.21 318.91 265.64 388.52 271.73 490.31 939.13 504.01 366.53 689.27 800.30 683.07 708.93 337.31 486.32 309.17 448.81 413.02 324.89 57 ER10b ExonRegion 0 431.43 253.49 380.72 311.71 315.31 476.12 317.65 355.84 257.59 462.46 894.99 364.57 352.12 772.90 774.82 643.68 598.67 333.53 405.81 280.48 422.41 398.75 339.86 58 E10_Db KnownBoundary 0 6.22 5.66 16.53 5.29 17.06 4.54 5.48 13.84 0.00 6.61 19.27 0.00 0.00 14.54 35.23 10.17 23.56 2.53 9.60 0.00 5.93 4.90 4.10 59 E10b_E11a KnownJunction 0 614.33 277.85 386.71 317.34 530.99 616.63 456.07 326.79 249.45 486.90 728.66 261.39 386.66 854.09 870.51 652.99 540.06 336.52 487.36 333.20 350.28 457.78 399.84 60 E10b_E12a NovelJunction 0 3.48 13.94 6.53 3.63 0.00 5.11 8.39 1.77 1.27 17.65 6.79 13.50 0.00 2.47 14.09 3.93 4.68 11.40 8.09 3.00 0.00 5.14 0.00 61 ER10c ExonRegion 0 12.21 0.88 6.68 6.74 5.83 2.34 3.64 4.27 2.16 3.83 13.72 2.09 1.13 10.67 13.61 8.28 6.92 2.10 4.58 3.80 2.80 2.66 3.16 62 ER11a ExonRegion 0 549.36 241.45 390.07 334.59 550.23 601.56 393.11 343.83 294.00 476.01 775.95 400.98 401.54 692.66 729.16 645.24 593.08 264.97 434.56 264.93 356.62 404.04 394.98 63 E11_Da NovelBoundary 0 724.65 207.73 298.01 269.33 440.92 445.20 291.03 274.66 251.15 358.15 516.03 265.44 282.94 408.74 414.86 618.64 495.93 123.28 316.15 176.09 227.83 354.91 373.29 64 E11b_E12a KnownJunction 1 1071.38 377.04 473.16 465.84 531.66 750.36 430.72 443.44 358.50 511.05 573.41 626.15 840.04 770.44 1003.03 1051.86 632.07 286.77 588.25 249.28 365.04 443.94 647.05 65 ER11b ExonRegion 0 799.62 285.79 431.09 393.24 523.91 626.30 373.45 368.05 330.35 486.29 648.55 596.60 707.57 755.00 850.65 879.15 636.19 213.85 449.56 233.05 356.27 427.68 572.84 66 I11 Intron 0 29.98 4.43 17.91 13.28 13.12 27.38 10.39 15.16 10.03 16.58 20.22 8.19 9.68 21.96 25.76 16.52 6.83 9.81 9.03 8.35 5.52 8.17 10.56 67 I11_AR1 ActiveIntronRegion 0 12.73 3.57 9.31 8.23 13.88 38.88 11.81 6.59 7.11 9.90 19.22 11.06 4.94 21.18 25.41 27.43 4.28 10.86 4.43 4.23 4.71 10.36 7.94 68 I11_SR1 SilentIntronRegion 0 34.44 4.81 21.50 17.10 16.05 27.84 16.25 11.00 12.91 20.23 24.25 12.99 0.43 28.50 39.04 39.45 2.70 15.62 21.14 4.26 6.41 13.64 22.96 69 I11_AR2 ActiveIntronRegion 0 33.36 4.61 19.57 14.22 12.96 25.28 10.00 17.02 10.56 17.85 20.40 7.52 10.92 22.04 25.57 13.82 7.49 9.49 9.61 9.31 5.69 7.63 10.77 70 ER12a ExonRegion 0 595.61 218.59 377.88 408.28 392.85 490.14 267.29 344.70 320.44 471.60 689.95 458.21 643.38 900.37 1132.25 992.01 534.26 283.86 709.29 305.02 322.50 573.72 601.67 71 E12_Da KnownBoundary 0 248.56 176.74 364.59 474.03 365.11 362.86 208.76 371.93 335.91 504.15 605.00 343.31 452.24 1053.22 1223.81 751.17 547.73 334.03 664.21 351.67 317.29 603.70 499.97 72 ER12b ExonRegion 0 117.59 103.62 142.81 105.86 137.21 123.39 90.36 112.50 84.19 148.72 200.72 105.49 94.00 164.55 171.62 119.60 129.82 74.86 137.18 101.31 73.37 115.67 81.70