Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	FLG	Gene	0	0.24	0.01	0.20	0.10	0.06	0.37	0.04	0.21	0.36	0.62	0.00	0.97	0.07	0.61	0.00	0.64	0.24	2.33	23.68	0.21	10.41	5.60	6.22
2	271820	Transcript	0	3.69	0.00	0.46	0.95	0.00	3.21	0.47	1.16	2.05	7.19	0.00	4.80	0.00	1.24	0.00	5.00	0.91	14.41	160.66	1.49	62.97	34.47	43.15
3	368799	Transcript	0	0.24	0.11	0.21	0.09	0.07	0.49	0.03	0.09	0.24	0.87	0.00	0.84	0.03	0.51	0.00	0.63	0.38	2.47	18.50	0.23	9.15	4.83	4.88
4	368796	Transcript	0	1.82	0.00	0.00	0.82	0.00	0.00	0.00	0.00	0.90	4.31	0.00	0.00	3.49	0.00	0.00	1.97	2.38	21.87	102.87	2.72	68.14	38.15	26.85
5	392689	Transcript	0	0.00	0.00	0.86	0.00	0.00	1.42	0.00	0.90	1.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.27	44.42	0.00	13.34	11.91	7.30
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.86	0.00	0.00	0.00	0.00	0.00	0.00	2.12	0.00	0.00	0.00	0.00	0.00	0.00	1.02	0.00	0.00	2.67	0.00
8	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER3a	ExonRegion	0	0.43	0.00	0.45	0.00	0.00	0.30	0.00	0.21	0.30	0.17	0.00	0.58	0.00	0.21	0.00	0.24	0.00	0.59	5.55	0.00	0.46	3.25	2.54
10	E3_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.14	18.07	2.81	11.68	3.12	4.01
11	E3a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.14	14.40	2.81	13.65	3.12	3.76
12	ER3b	ExonRegion	0	0.22	0.00	0.29	0.21	0.07	0.34	0.03	0.40	0.28	0.87	0.00	0.56	0.10	0.67	0.00	1.09	0.35	4.27	28.72	0.39	11.98	5.87	8.03
13	E3_Ab	KnownBoundary	0	3.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.58	7.88	9.51	0.00	10.93	17.76	23.30
14	ER3c	ExonRegion	0	0.39	0.00	0.00	0.00	0.00	0.34	0.00	0.00	0.76	0.61	0.00	0.00	0.00	0.00	0.00	2.29	0.00	2.76	31.97	0.00	10.33	6.30	9.93
15	E3_Db	KnownBoundary	0	0.00	0.00	1.83	3.23	0.00	2.38	1.90	2.46	0.00	4.35	0.00	0.00	0.00	0.00	0.00	3.67	3.93	6.80	183.06	0.00	88.16	39.74	39.27
16	E3b_E3c	KnownJunction	0	0.00	0.00	1.83	1.83	0.00	2.21	1.90	2.46	0.00	4.30	0.00	5.85	0.00	0.00	0.00	3.33	3.65	17.33	163.30	0.00	82.97	31.66	34.57
17	ER3d	ExonRegion	0	0.11	0.00	0.29	0.21	0.14	0.19	0.07	0.19	0.19	0.54	0.00	0.47	0.10	0.61	0.00	0.84	0.26	2.19	28.43	0.11	11.97	6.72	7.54
18	E3_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.85	0.00	0.00	0.00	5.85	0.00	0.00	0.00	0.00	0.00	0.00	23.91	0.00	5.56	4.84	6.66
19	ER3e	ExonRegion	0	0.00	0.00	0.38	0.42	0.00	0.76	0.00	0.63	0.00	1.05	0.00	1.33	0.00	0.28	0.00	1.86	0.69	1.15	23.92	0.00	11.62	5.21	4.70
20	E3_Dc	KnownBoundary	0	10.45	0.00	0.00	1.96	0.00	13.12	0.00	0.00	3.27	7.87	0.00	0.00	7.79	7.18	0.00	3.85	0.00	11.81	226.36	0.00	98.23	51.31	63.94
21	E3c_E3e	KnownJunction	0	7.33	0.00	0.00	1.96	0.00	10.62	0.00	0.00	4.83	12.33	0.00	7.05	0.00	0.00	0.00	3.85	0.00	9.70	176.19	0.00	78.95	42.19	49.94
22	ER3f	ExonRegion	0	0.41	0.00	0.90	0.17	0.00	1.82	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.12	0.00	0.00	1.08	2.47	24.04	0.00	10.09	5.03	1.98
23	E3_Ad	KnownBoundary	0	3.70	0.00	1.77	1.43	0.00	0.00	0.00	2.01	4.77	0.00	0.00	0.00	0.00	2.24	0.00	7.69	9.54	29.76	74.73	3.26	54.12	48.44	28.17
24	ER3g	ExonRegion	0	0.37	0.04	0.24	0.11	0.00	0.59	0.00	0.51	0.98	1.28	0.00	1.23	0.00	0.68	0.00	0.20	0.95	3.46	28.61	0.14	11.75	8.19	7.92
25	E3_Dd	KnownBoundary	0	0.00	2.96	1.69	0.00	0.00	5.79	0.00	4.35	1.48	4.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	19.19	68.05	3.26	26.26	24.19	8.62
26	E3d_E3g	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	18.90	38.78	0.00	14.64	8.39	16.48
27	ER3h	ExonRegion	0	0.00	0.74	0.00	0.00	0.00	1.04	0.00	0.00	0.29	1.73	0.00	2.33	0.00	0.67	0.00	1.49	0.00	3.48	8.03	1.06	12.38	7.44	3.48
28	E3_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.56	4.67	0.00	13.35	0.00	0.00	0.00	0.00	0.00	4.31	3.67	0.00	2.59	5.51	0.00
29	ER3i	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.85	0.31	0.00	1.15	1.47	0.00	0.75	0.00	1.20	0.00	1.38	0.00	2.55	18.17	0.00	11.53	4.09	6.81
30	E3_Af	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	2.90	0.00	2.46	1.65	6.39	0.00	0.00	0.00	3.00	0.00	0.00	0.00	9.29	184.66	0.00	92.73	34.05	57.36
31	ER3j	ExonRegion	0	0.26	0.00	0.00	0.00	0.00	0.36	0.00	0.00	0.37	1.35	0.00	0.79	0.00	1.92	0.00	0.87	0.00	0.00	32.44	0.00	14.61	5.63	8.82
32	E3_De	KnownBoundary	0	0.00	0.00	1.15	0.00	0.00	0.00	0.00	0.00	0.00	1.56	0.00	0.00	0.00	0.00	0.00	17.35	0.00	2.16	40.85	0.00	14.15	17.70	12.21
33	E3e_E3h	KnownJunction	0	7.41	0.00	0.00	0.00	0.00	0.00	0.00	2.18	3.36	5.45	0.00	6.30	0.00	4.94	0.00	12.82	0.00	25.45	288.76	3.13	76.30	60.93	84.34
34	ER3k	ExonRegion	0	0.33	0.00	0.19	0.00	0.00	0.58	0.00	0.27	0.51	0.76	0.00	2.10	0.12	0.66	0.00	0.28	0.09	2.42	33.97	0.39	16.21	7.55	6.90
35	E3_Df	KnownBoundary	0	0.00	0.00	1.69	0.00	0.00	2.84	0.00	1.81	3.50	0.00	0.00	17.56	0.00	0.00	0.00	0.00	3.93	9.04	118.03	0.00	37.56	23.82	31.58
36	E3f_E3h	KnownJunction	0	0.00	0.00	1.71	0.00	0.00	2.84	0.00	1.81	3.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.54	88.85	0.00	26.69	23.82	14.60
37	ER3l	ExonRegion	0	0.55	0.00	0.00	0.00	0.00	0.02	0.00	0.00	0.09	0.00	0.00	1.43	0.00	1.04	0.00	0.38	0.00	1.89	22.16	0.00	7.64	4.00	6.39
38	E3_Ag	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	2.44	0.00	0.00	0.00	1.48	0.00	0.00	0.00	4.94	0.00	0.00	0.00	22.18	77.37	0.00	20.70	13.41	24.67
39	ER3m	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.39	0.00	0.00	0.00	0.74	0.00	2.72	0.00	0.00	0.00	0.00	0.00	2.12	12.23	1.37	19.55	5.65	6.20
40	E3_Dg	KnownBoundary	0	3.63	0.00	0.00	1.63	0.00	0.00	0.00	0.00	1.79	4.67	0.00	0.00	7.63	2.47	0.00	4.36	0.00	22.68	103.63	5.43	58.56	33.80	28.26
41	E3g_E3i	KnownJunction	0	3.63	0.00	0.00	1.63	0.00	0.00	0.00	0.00	1.79	4.65	0.00	0.00	6.98	0.00	0.00	3.93	4.77	24.83	166.97	5.43	121.64	67.91	37.22
42	ER3n	ExonRegion	0	0.42	0.00	0.00	0.00	0.26	0.00	0.00	0.00	0.85	0.25	0.00	1.06	0.00	0.42	0.00	0.59	0.97	2.97	18.12	0.05	9.97	4.74	6.17
43	E3_Ah	KnownBoundary	0	3.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.36	0.00	0.00	0.00	0.00	2.47	0.00	0.00	0.00	9.99	45.27	3.13	14.70	5.51	26.97
44	ER3o	ExonRegion	0	0.32	0.00	0.40	0.00	0.00	0.84	0.15	0.00	0.07	0.00	0.00	0.28	0.00	1.31	0.00	0.38	0.01	1.98	24.72	0.95	10.86	5.55	6.28
45	E3_Ai	KnownBoundary	0	0.00	0.00	0.00	1.63	0.00	0.00	0.00	1.77	0.00	0.00	0.00	6.00	0.00	0.00	0.00	0.00	4.77	6.38	121.89	0.00	91.68	39.62	33.12
46	ER3p	ExonRegion	0	0.00	0.00	0.02	0.00	0.00	1.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.22	0.00	3.10	0.00	1.56	30.72	0.00	16.42	10.97	14.41
47	E3_Dh	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.16	2.05	0.00	1.53	0.00	0.00	0.00	4.83	0.00	0.00	0.00	4.73	47.44	0.00	36.26	17.94	8.19
48	E3h_E3j	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER3q	ExonRegion	0	1.23	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.90	0.00	0.00	3.10	0.00	1.58	0.00	0.00	0.00	3.12	34.28	0.00	19.67	7.40	4.56
50	E3_Aj	KnownBoundary	0	3.26	0.00	0.00	0.00	0.00	0.00	0.00	2.22	6.80	5.26	0.00	24.01	0.00	0.00	0.00	0.00	4.21	26.28	191.35	0.00	80.25	34.41	27.23
51	ER3r	ExonRegion	0	0.27	0.00	0.00	0.00	0.34	0.98	0.00	0.00	1.33	0.88	0.00	3.28	0.00	1.09	0.00	0.00	0.00	3.25	42.65	0.00	22.99	6.95	9.24
52	E3_Di	KnownBoundary	0	3.41	0.00	1.30	0.00	3.65	13.29	0.00	4.31	5.38	4.97	0.00	37.81	0.00	0.00	0.00	3.59	4.77	22.22	186.73	0.00	128.44	53.21	60.01
53	ER3s	ExonRegion	0	0.00	0.00	0.00	0.15	0.21	0.19	0.00	0.24	0.00	1.07	0.00	1.19	0.00	1.19	0.00	1.23	0.34	2.78	28.65	0.44	12.47	4.23	5.84
54	E3_Dj	KnownBoundary	0	0.00	0.00	3.43	0.00	0.00	0.00	0.00	0.00	0.00	3.09	0.00	0.00	0.00	4.89	0.00	3.85	0.00	19.48	152.19	6.46	94.58	43.97	32.35
55	ER3t	ExonRegion	0	0.00	0.00	0.00	0.17	0.00	0.00	0.18	0.02	0.37	0.00	0.00	1.00	0.26	0.36	0.00	0.00	0.00	1.70	13.27	0.00	5.71	4.04	3.50
56	E3_Dk	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER3u	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.13	0.00	0.00	0.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.57