Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 JTB Gene 0 322.82 284.04 465.77 362.67 254.32 264.26 199.41 248.94 179.14 311.26 376.13 228.89 160.11 539.36 895.88 522.84 393.63 235.53 246.29 219.13 253.76 300.39 208.54 2 271843 Transcript 0 87.03 51.98 66.64 56.25 52.08 61.67 41.60 25.83 20.93 31.43 30.53 48.83 17.87 53.21 94.95 88.39 33.01 45.55 53.15 21.38 21.09 47.76 39.73 3 368589 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 461365 Transcript 0 0.00 0.00 0.68 1.36 0.00 0.00 0.00 0.00 0.00 0.89 0.00 0.00 0.00 1.08 0.00 0.00 0.00 0.41 0.00 1.42 0.00 0.00 0.00 5 356648 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 471173 Transcript 0 3.11 3.22 1.83 3.36 3.99 0.00 0.00 4.52 1.27 2.95 0.00 0.00 0.00 7.42 4.82 0.00 4.21 0.00 0.00 0.00 0.00 0.00 4.27 7 428469 Transcript 0 0.00 0.00 3.16 3.80 6.79 16.92 3.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 1.78 0.00 6.01 2.53 0.00 0.00 8 433648 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 IG16 Intergenic 0 8.09 4.44 8.63 9.60 11.40 7.22 8.68 6.82 7.29 7.05 2.85 5.97 2.85 5.01 7.97 5.03 4.60 4.80 9.22 7.15 7.34 12.52 21.42 10 IG16_SR1 SilentIntergenicRegion 0 2.40 1.44 1.77 2.57 3.50 2.29 6.19 1.55 3.21 2.56 0.13 2.54 1.28 0.50 1.89 1.29 0.22 1.06 2.28 2.20 2.84 8.64 15.10 11 IG16_AR1 ActiveIntergenicRegion 0 12.36 6.75 13.85 14.97 17.44 11.00 10.71 10.85 10.46 10.50 4.91 8.63 4.07 8.42 12.61 7.86 7.90 7.65 14.53 10.88 10.82 15.56 26.67 12 ER1a ExonRegion 0 43.57 41.86 11.92 9.59 26.39 75.88 27.67 7.81 7.07 5.26 20.00 0.00 0.00 42.40 61.33 71.43 20.94 66.97 36.36 12.55 20.67 11.50 28.66 13 E1_Ac KnownBoundary 0 93.79 92.94 23.21 30.63 37.18 174.67 52.07 27.07 21.41 11.44 28.95 0.00 0.00 49.97 97.53 133.38 50.12 129.79 91.58 36.43 36.26 26.45 57.88 14 E1_Ad KnownBoundary 1 382.66 152.01 5.44 12.15 193.63 412.49 269.61 7.23 8.54 8.19 138.82 0.00 0.00 385.55 269.24 257.71 151.66 38.30 174.97 38.48 114.47 68.64 106.62 15 ER1b ExonRegion 1 212.07 127.30 39.46 31.07 108.10 297.44 165.23 19.01 16.80 28.67 101.67 0.00 0.00 314.10 293.61 231.23 124.11 155.21 136.97 35.74 90.35 54.59 85.75 16 E1_Ae KnownBoundary 1 1068.41 298.37 204.22 139.31 265.62 679.72 441.72 101.04 83.45 160.69 468.43 13.20 0.00 320.74 785.84 859.09 519.87 464.32 337.61 168.74 258.85 274.88 317.21 17 ER1c ExonRegion 1 416.83 196.42 80.59 52.99 155.82 476.14 269.31 35.59 36.40 66.18 228.88 0.51 0.00 447.11 503.11 430.08 258.83 269.23 235.15 81.10 154.26 147.81 175.85 18 ER1d ExonRegion 1 731.61 277.08 160.52 94.95 243.05 671.78 416.83 66.83 64.12 123.67 442.79 4.33 0.00 627.59 953.30 771.02 485.23 420.21 334.99 147.87 270.32 229.19 284.12 19 ER1e ExonRegion 1 385.83 203.36 205.59 103.20 133.53 341.47 211.91 99.49 73.40 153.85 254.18 11.19 2.52 167.11 374.86 471.01 310.12 306.28 164.01 98.24 198.95 126.05 167.21 20 E1_Da KnownBoundary 0 31.64 39.34 111.65 52.91 3.57 15.22 11.00 49.04 32.46 54.93 24.22 6.15 0.00 4.65 69.84 21.70 42.54 5.14 0.00 11.89 24.71 14.63 25.52 21 E1a_E1g KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 8.90 0.00 4.11 0.00 0.00 0.00 0.00 3.12 0.00 22 ER1f ExonRegion 1 113.15 74.82 289.39 180.94 66.00 93.45 64.23 130.07 102.86 189.87 281.03 34.49 10.38 472.23 826.08 510.41 403.33 260.48 216.01 179.55 241.23 199.85 213.49 23 E1_Af KnownBoundary 1 323.09 130.44 285.71 204.67 160.95 150.82 142.73 135.71 87.04 146.08 196.26 23.41 0.00 230.09 393.60 612.66 180.36 328.97 158.22 117.29 154.07 158.96 231.08 24 E1_Ag KnownBoundary 0 104.61 62.82 160.79 134.81 179.54 175.92 103.12 82.93 68.87 129.56 146.72 53.42 45.13 137.74 221.52 237.80 152.13 199.97 89.13 117.29 153.21 95.71 67.95 25 ER1g ExonRegion 1 321.71 167.57 491.62 329.27 307.71 308.81 204.15 240.26 172.17 308.75 324.34 57.15 34.71 520.69 869.80 782.86 341.31 589.43 254.19 225.11 311.60 240.85 250.20 26 ER1h ExonRegion 0 273.07 207.79 460.96 273.31 351.75 517.94 259.28 209.90 149.97 307.00 364.97 98.45 68.38 569.16 862.83 450.81 363.69 404.07 185.52 258.17 345.41 194.52 197.05 27 E1_Db KnownBoundary 0 305.02 350.07 431.12 226.74 465.45 785.51 406.87 201.80 140.97 290.03 390.68 151.10 77.59 644.18 962.86 428.35 373.91 247.31 152.85 260.33 330.51 151.06 261.30 28 E1b_E2b KnownJunction 0 0.00 0.00 3.16 3.80 6.79 16.92 3.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 1.78 0.00 6.01 2.53 0.00 0.00 29 ER1i ExonRegion 1 349.74 496.89 562.82 331.17 223.64 371.02 278.74 260.19 199.94 376.66 472.57 123.89 85.42 793.99 1198.80 603.03 544.49 316.89 252.55 289.32 403.46 286.37 224.73 30 E1c_E2a KnownJunction 1 621.00 701.13 751.75 410.14 391.85 366.21 290.46 309.62 201.42 398.47 628.69 157.70 73.86 934.55 1223.19 679.48 562.69 305.72 334.88 368.80 442.26 326.56 236.11 31 E1c_E2b KnownJunction 0 3.11 3.22 1.83 3.36 3.99 0.00 0.00 4.52 1.27 2.95 0.00 0.00 0.00 7.42 4.82 0.00 4.21 0.00 0.00 0.00 0.00 0.00 4.27 32 I1 Intron 0 56.74 15.96 10.75 19.26 16.62 22.78 12.98 10.95 12.64 13.41 22.12 6.08 7.85 44.60 52.06 33.04 28.06 23.14 13.54 10.43 24.48 31.33 47.04 33 I1_AR1 ActiveIntronRegion 0 57.46 16.16 10.89 19.50 16.84 23.08 13.15 11.09 12.80 13.58 22.40 6.16 7.95 45.17 52.73 33.45 28.42 23.43 13.71 10.57 24.80 31.74 47.65 34 ER2a ExonRegion 1 632.50 684.67 763.18 508.39 370.31 333.80 296.43 383.08 282.13 530.90 651.44 185.48 96.64 1019.01 1577.29 773.69 548.04 388.37 349.30 398.71 446.25 390.88 324.27 35 E2_Da KnownBoundary 0 277.60 49.79 79.65 66.36 51.78 67.40 37.36 39.02 39.18 44.54 65.17 0.00 21.10 82.94 107.55 65.97 72.93 62.88 13.18 45.64 51.65 60.99 58.64 36 E2a_E2d KnownJunction 1 714.72 824.46 682.80 530.83 469.36 398.52 396.23 392.63 277.40 510.03 695.91 210.52 106.49 1005.54 1936.47 904.63 559.05 354.72 404.15 422.56 413.85 500.03 383.19 37 E2a_E3a NovelJunction 0 11.04 6.31 21.17 0.00 3.65 5.11 8.39 9.00 4.20 9.13 9.42 0.00 0.00 17.01 11.74 24.95 19.45 0.00 0.00 5.69 0.00 10.47 0.00 38 ER2b ExonRegion 0 161.68 55.96 52.40 67.16 58.87 83.17 45.85 44.30 32.20 43.75 52.90 9.14 19.11 85.42 99.72 114.10 64.55 50.54 49.31 42.08 58.03 58.92 60.31 39 E2_Ab KnownBoundary 0 243.52 93.80 46.24 64.13 96.43 115.05 68.89 48.59 30.09 46.39 58.44 6.30 0.00 104.24 133.88 137.74 67.23 37.89 65.60 33.62 51.89 48.56 82.55 40 ER2c ExonRegion 0 149.75 90.86 77.78 90.05 69.78 108.45 54.72 49.36 36.15 56.11 62.71 13.64 12.66 82.60 125.50 104.00 71.68 49.51 52.94 46.13 43.59 42.94 65.80 41 E2_Ac KnownBoundary 0 176.62 92.68 63.27 77.91 100.08 115.44 73.93 37.21 24.71 46.82 59.07 19.66 30.03 112.25 163.67 127.74 71.90 30.84 39.44 52.16 44.17 67.79 67.18 42 ER2d ExonRegion 0 127.18 110.23 113.64 120.13 97.51 117.15 67.25 67.92 50.68 68.58 99.03 39.47 30.90 146.27 203.51 167.49 83.40 59.67 54.15 66.21 65.66 91.25 91.64 43 E2_Ad KnownBoundary 0 91.65 92.94 90.71 107.98 97.79 105.00 73.53 65.43 46.73 46.61 78.44 40.81 53.73 133.56 133.63 129.11 73.49 40.13 41.13 57.33 49.05 74.64 80.07 44 ER2e ExonRegion 0 745.17 481.07 1168.21 919.05 741.87 582.66 447.68 599.39 442.83 741.45 910.61 342.56 289.52 1221.50 2019.56 1197.19 862.14 536.23 550.56 444.60 546.20 625.74 443.43 45 E2b_E3a KnownJunction 0 720.72 366.71 1476.20 1217.46 822.75 428.28 409.61 652.26 500.72 876.59 971.93 461.40 391.70 1429.28 1956.00 1245.83 968.96 577.57 568.58 585.93 619.63 554.29 508.25 46 ER3a ExonRegion 0 576.92 489.12 1326.77 1119.13 597.13 492.53 392.96 690.61 459.35 832.94 1014.86 677.53 533.12 1396.21 2220.02 1545.90 903.90 586.21 733.06 572.59 595.59 845.16 575.14 47 E3_Da NovelBoundary 0 297.31 364.67 913.21 774.03 277.33 336.17 254.60 468.82 269.15 537.16 523.55 439.04 318.49 825.42 1250.51 962.91 465.08 340.17 598.51 342.40 303.76 770.32 383.28 48 E3b_E4a KnownJunction 0 654.34 796.96 1388.39 1274.16 735.99 667.85 643.76 790.92 512.41 897.35 884.59 694.58 469.13 1334.63 2700.92 1087.49 1005.14 482.56 839.08 564.07 545.31 962.77 498.18 49 ER3b ExonRegion 0 483.87 639.48 1310.11 1150.59 563.14 606.56 495.16 757.86 487.49 855.06 935.37 748.33 482.71 1492.44 2496.19 1299.73 974.78 516.80 873.03 571.36 577.54 1047.53 538.08 50 ER3c ExonRegion 0 0.00 0.00 0.68 1.36 0.00 0.00 0.00 0.00 0.00 0.89 0.00 0.00 0.00 1.08 0.00 0.00 0.00 0.41 0.00 1.42 0.00 0.00 0.00 51 ER4a ExonRegion 0 559.28 649.04 1026.93 904.62 553.01 468.50 375.82 627.40 433.49 727.50 772.76 685.10 476.89 1079.12 1887.38 946.89 804.78 332.85 476.19 479.18 480.58 686.74 393.74 52 E4_Da KnownBoundary 0 1429.07 1357.39 1189.11 1004.90 797.03 558.60 503.15 728.82 497.33 747.62 1015.15 1134.37 831.76 1321.04 2684.35 1853.62 1074.61 405.50 1028.17 607.53 568.60 1670.94 634.16 53 ER4b ExonRegion 0 377.47 322.98 462.07 391.93 325.68 222.02 212.39 295.25 211.56 331.51 400.75 514.90 382.14 512.10 928.14 446.82 387.28 158.97 235.28 224.07 204.11 414.11 168.07 54 E4_Db KnownBoundary 0 9.85 40.91 44.35 30.07 26.91 14.82 32.33 23.21 15.19 26.06 33.01 24.01 7.95 13.89 40.67 63.74 20.38 9.16 17.60 28.32 2.35 37.66 22.79 55 E4_Dc KnownBoundary 0 13.48 38.22 52.60 51.31 78.69 15.96 10.33 19.02 28.91 39.11 14.42 45.01 19.15 31.08 43.14 155.77 25.25 18.94 97.13 16.94 10.87 85.05 63.94 56 ER4c ExonRegion 1 84.66 89.48 132.34 119.93 109.71 42.18 59.58 70.87 62.99 95.19 65.72 238.12 107.87 115.31 290.13 237.77 69.32 51.74 152.90 51.06 17.63 164.60 96.91 57 ER4d ExonRegion 1 130.49 62.10 121.36 102.92 77.77 47.46 55.52 43.86 34.80 57.60 41.06 97.65 35.74 64.03 128.57 105.35 45.09 24.13 69.93 30.21 21.52 84.02 50.81