Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GOLPH3L Gene 0 74.07 71.59 40.57 66.76 67.93 71.07 42.00 42.78 44.81 45.35 72.69 169.11 143.92 105.64 117.07 107.87 87.44 38.61 48.87 36.91 45.37 64.05 39.07 2 369003 Transcript 0 14.50 20.99 5.34 6.66 21.51 30.76 35.15 2.90 5.41 6.97 15.32 0.00 0.80 30.98 34.38 46.10 40.92 19.38 18.03 10.32 9.02 6.84 8.64 3 427665 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 479757 Transcript 0 13.79 12.31 9.60 10.58 44.35 16.47 22.65 1.26 2.69 4.59 3.25 21.08 12.90 5.05 12.79 11.87 3.92 2.94 2.12 8.63 1.56 4.37 1.04 5 271732 Transcript 0 16.37 76.30 21.55 39.49 97.20 134.64 83.73 31.01 45.95 38.20 90.34 175.71 85.55 181.24 145.00 163.29 84.71 81.58 45.65 43.02 54.49 69.81 49.60 6 ER1a ExonRegion 0 14.50 20.99 5.34 6.66 21.51 30.76 35.15 2.90 5.41 6.97 15.32 0.00 0.80 30.98 34.38 46.10 40.92 19.38 18.03 10.32 9.02 6.84 8.64 7 E1_Ab KnownBoundary 0 55.34 84.46 12.21 18.18 89.30 134.30 141.50 0.00 8.16 12.54 53.80 0.00 12.17 115.19 95.80 143.72 132.40 37.52 57.23 31.00 34.84 24.19 29.45 8 ER1b ExonRegion 1 102.36 91.00 26.01 31.08 149.92 215.98 149.72 25.64 27.79 29.53 118.71 8.06 9.12 242.49 130.64 222.17 206.12 95.62 81.05 64.42 104.19 52.78 72.52 9 E1_Ac KnownBoundary 1 221.97 124.06 33.41 49.54 298.81 350.76 202.00 40.29 43.29 37.79 206.89 23.26 19.15 423.10 247.61 362.73 306.87 122.29 106.07 108.60 186.26 94.24 141.53 10 ER1c ExonRegion 0 80.25 40.50 28.71 33.42 76.74 91.91 53.21 31.91 33.89 34.49 71.26 37.26 39.75 92.40 57.71 161.06 107.71 75.41 49.71 29.33 73.90 34.50 47.79 11 E1_Ad KnownBoundary 0 65.20 19.93 26.29 31.76 25.55 37.82 13.96 31.09 22.48 30.06 40.80 54.17 45.61 28.84 43.88 86.90 67.88 36.19 27.20 25.63 47.38 23.82 35.60 12 ER1d ExonRegion 1 58.01 13.85 32.55 38.42 14.80 16.27 11.34 36.35 31.84 42.44 101.84 50.60 29.02 60.85 57.93 77.83 158.44 37.71 17.52 28.72 97.79 16.08 18.81 13 E1a_E2a KnownJunction 1 81.20 20.26 32.97 59.50 12.65 5.22 11.84 42.63 38.05 48.27 167.73 43.51 27.27 115.37 59.09 97.41 293.88 35.61 25.69 49.79 153.95 14.57 25.18 14 E2_Aa NovelBoundary 0 41.56 3.03 4.49 3.33 16.81 15.56 10.42 6.94 1.68 0.00 0.00 6.75 6.49 5.47 0.00 8.03 0.00 0.00 9.13 2.88 0.00 8.57 4.35 15 ER2a ExonRegion 0 38.72 39.92 35.40 52.84 93.06 104.02 57.81 48.90 48.37 44.86 95.35 130.48 104.91 166.68 127.34 186.15 120.91 86.04 53.91 44.74 63.73 61.95 56.52 16 E2_Da KnownBoundary 0 31.78 25.00 13.66 29.07 22.07 37.59 12.90 4.60 7.64 13.46 4.53 19.96 0.00 10.01 19.66 14.53 8.79 6.80 7.53 8.56 0.00 4.96 0.00 17 E2a_E3a KnownJunction 0 0.00 0.00 2.63 4.76 3.57 2.56 1.94 0.00 1.24 2.77 6.79 5.85 0.00 10.30 18.05 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 18 E2a_E4a KnownJunction 0 16.37 76.30 21.55 39.49 97.20 134.64 83.73 31.01 45.95 38.20 90.34 175.71 85.55 181.24 145.00 163.29 84.71 81.58 45.65 43.02 54.49 69.81 49.60 19 E2a_E5a NovelJunction 0 3.78 0.00 1.74 1.96 7.98 0.00 1.94 0.00 3.30 2.69 2.00 0.00 12.66 2.12 4.45 0.00 4.77 1.53 9.60 0.00 5.50 0.00 16.13 20 ER2b ExonRegion 0 13.79 12.31 9.60 10.58 44.35 16.47 22.65 1.26 2.69 4.59 3.25 21.08 12.90 5.05 12.79 11.87 3.92 2.94 2.12 8.63 1.56 4.37 1.04 21 E2_Db NovelBoundary 0 33.64 8.42 20.52 32.16 19.35 0.00 20.40 18.03 6.54 8.89 6.95 0.00 6.66 10.12 18.05 12.39 12.34 2.57 4.42 5.94 2.84 0.00 0.00 22 I2 Intron 0 22.35 10.43 10.47 13.79 25.84 8.30 15.78 13.99 4.17 6.19 6.71 26.48 22.94 6.46 17.49 13.90 9.46 3.05 2.88 5.14 1.33 4.09 2.66 23 I2_SR1 SilentIntronRegion 0 23.32 10.86 10.84 14.36 26.96 8.66 16.37 14.56 4.35 6.45 7.00 27.47 23.88 6.74 18.08 14.41 9.84 3.18 3.01 5.36 1.39 4.25 2.77 24 E3_Aa NovelBoundary 0 10.52 12.83 10.11 4.99 4.33 0.00 22.43 5.79 5.27 6.10 2.47 35.86 27.43 12.18 9.52 4.36 14.31 0.00 3.58 0.00 0.00 2.69 0.00 25 ER3a ExonRegion 0 0.10 7.76 2.32 1.18 9.73 6.53 3.13 1.20 1.78 2.71 8.43 23.81 12.93 7.83 14.77 4.32 2.65 0.00 7.38 1.52 5.08 1.23 2.31 26 E3_Da NovelBoundary 0 6.96 6.05 75.57 85.10 12.73 0.00 10.95 74.39 67.74 67.48 2.63 6.30 21.43 2.06 4.45 11.11 0.00 95.14 4.71 6.20 3.15 2.82 3.59 27 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 7.81 2.61 4.06 2.55 1.71 1.21 4.84 5.70 6.49 2.47 20.40 16.32 0.00 0.00 0.00 0.00 0.00 2.82 0.00 28 I3_AR3 ActiveIntronRegion 1 10.51 18.51 8.58 10.90 13.19 0.00 10.18 6.91 0.00 1.15 0.00 39.86 1.94 4.31 11.10 6.15 2.50 0.38 0.00 5.94 0.00 2.95 0.00 29 ER4a ExonRegion 0 36.91 69.40 21.19 33.35 37.06 49.78 37.06 32.63 39.81 39.40 87.33 199.32 98.35 130.15 108.80 122.60 100.43 62.63 51.42 43.55 67.36 44.10 39.98 30 E4_Da NovelBoundary 0 29.78 12.96 12.03 10.16 3.14 10.39 19.83 17.25 11.78 11.93 17.32 22.21 17.69 37.20 8.65 51.27 41.51 13.80 11.39 11.82 18.16 22.47 17.93 31 E4a_E5a KnownJunction 0 94.46 71.04 24.48 34.33 41.94 47.70 45.93 39.76 43.23 35.08 96.92 119.29 108.43 125.38 128.07 132.02 123.05 43.48 38.78 40.91 70.67 45.37 29.28 32 ER5a ExonRegion 0 108.77 77.86 30.49 67.37 74.18 69.88 35.06 44.29 57.03 41.46 116.34 229.80 183.85 184.95 134.09 198.18 133.04 84.23 66.89 44.46 80.89 60.93 57.10 33 E5a_E6a KnownJunction 0 132.39 95.38 54.05 87.50 39.30 84.61 27.29 56.27 57.55 48.92 94.55 272.79 224.34 169.58 146.12 186.62 128.75 70.18 88.10 41.10 52.70 88.48 101.84 34 E6_Aa NovelBoundary 0 13.78 9.47 9.14 8.26 33.45 5.68 1.85 5.01 11.69 5.45 9.63 11.40 0.00 0.00 4.45 0.00 11.87 2.03 0.00 0.00 0.00 0.00 4.01 35 ER6a ExonRegion 0 75.20 86.18 45.01 81.34 62.95 77.40 47.65 59.86 63.52 57.86 121.90 262.21 225.35 182.61 151.06 201.24 138.64 58.28 70.24 53.83 72.08 69.52 66.20 36 E6_Da KnownBoundary 0 123.87 129.91 48.17 69.39 89.64 128.22 57.41 43.05 55.44 50.69 128.03 396.58 337.32 208.49 203.10 231.05 184.67 69.43 82.83 53.75 139.49 73.05 107.56 37 ER6b ExonRegion 0 84.54 80.81 46.89 77.20 71.42 72.69 41.31 46.04 47.37 49.74 67.30 181.79 160.19 93.99 125.69 89.60 79.47 29.47 49.23 36.54 38.94 73.95 36.44 38 IG45_SR2 SilentIntergenicRegion 0 0.00 2.40 2.01 0.10 0.00 6.32 0.52 2.16 1.17 3.54 0.62 0.00 0.00 9.72 2.64 1.17 0.29 4.88 1.02 4.03 1.97 0.00 0.00